Protein–RNA interactions for Protein: Q99MH6

Nkd1, Protein naked cuticle homolog 1, mousemouse

Predictions only

Length 471 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkd1Q99MH6 Gm24752-201ENSMUST00000178240 110 ntBASIC12.82□□□□□ -0.36
Nkd1Q99MH6 Gm24496-201ENSMUST00000178287 110 ntBASIC12.82□□□□□ -0.36
Nkd1Q99MH6 Gm25649-201ENSMUST00000178476 110 ntBASIC12.82□□□□□ -0.36
Nkd1Q99MH6 Gm25548-201ENSMUST00000178681 110 ntBASIC12.82□□□□□ -0.36
Nkd1Q99MH6 Gm23147-201ENSMUST00000178841 110 ntBASIC12.82□□□□□ -0.36
Nkd1Q99MH6 Gm26095-201ENSMUST00000179270 110 ntBASIC12.82□□□□□ -0.36
Nkd1Q99MH6 Gm22171-201ENSMUST00000179283 110 ntBASIC12.82□□□□□ -0.36
Nkd1Q99MH6 Gm23936-201ENSMUST00000179354 110 ntBASIC12.82□□□□□ -0.36
Nkd1Q99MH6 Gm22619-201ENSMUST00000179516 110 ntBASIC12.82□□□□□ -0.36
Nkd1Q99MH6 Gm25255-201ENSMUST00000179579 110 ntBASIC12.82□□□□□ -0.36
Nkd1Q99MH6 Gm24755-201ENSMUST00000179691 110 ntBASIC12.82□□□□□ -0.36
Nkd1Q99MH6 Gm26506-201ENSMUST00000179692 110 ntBASIC12.82□□□□□ -0.36
Nkd1Q99MH6 Gm25086-201ENSMUST00000179931 110 ntBASIC12.82□□□□□ -0.36
Nkd1Q99MH6 Gm23243-201ENSMUST00000180047 110 ntBASIC12.82□□□□□ -0.36
Nkd1Q99MH6 Gm24659-201ENSMUST00000180212 110 ntBASIC12.82□□□□□ -0.36
Nkd1Q99MH6 Gm24169-201ENSMUST00000180244 110 ntBASIC12.82□□□□□ -0.36
Nkd1Q99MH6 Gm23689-201ENSMUST00000180354 110 ntBASIC12.82□□□□□ -0.36
Nkd1Q99MH6 Gm27359-201ENSMUST00000184153 110 ntBASIC12.82□□□□□ -0.36
Nkd1Q99MH6 Gm27785-201ENSMUST00000184268 110 ntBASIC12.82□□□□□ -0.36
Nkd1Q99MH6 Gm27466-201ENSMUST00000184396 110 ntBASIC12.82□□□□□ -0.36
Nkd1Q99MH6 Gm27703-201ENSMUST00000184836 110 ntBASIC12.82□□□□□ -0.36
Nkd1Q99MH6 Gm27397-201ENSMUST00000184997 107 ntBASIC12.82□□□□□ -0.36
Nkd1Q99MH6 Gm33320-201ENSMUST00000192232 530 ntBASIC12.82□□□□□ -0.36
Nkd1Q99MH6 Gm2213-201ENSMUST00000197485 688 ntBASIC12.82□□□□□ -0.36
Nkd1Q99MH6 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nkd1Q99MH6 Gm16476-201ENSMUST00000221544 139 ntBASIC12.82□□□□□ -0.36
Nkd1Q99MH6 Rps10-201ENSMUST00000025052 519 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nkd1Q99MH6 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkd1Q99MH6 Rxfp4-201ENSMUST00000063119 1245 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Nkd1Q99MH6 Mfn2-203ENSMUST00000105715 4043 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkd1Q99MH6 Cfap69-201ENSMUST00000054865 4956 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkd1Q99MH6 Ripor2-201ENSMUST00000038477 3371 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkd1Q99MH6 Pcdhb22-202ENSMUST00000192409 6609 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
Nkd1Q99MH6 Psmc5-201ENSMUST00000021049 1316 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkd1Q99MH6 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
Nkd1Q99MH6 Inpp4b-215ENSMUST00000217122 4392 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
Nkd1Q99MH6 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.82□□□□□ -0.36
Nkd1Q99MH6 Eif2ak1-201ENSMUST00000100487 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkd1Q99MH6 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nkd1Q99MH6 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nkd1Q99MH6 5830418P13Rik-201ENSMUST00000143564 2178 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nkd1Q99MH6 Gm20488-201ENSMUST00000201641 2996 ntTSL 2 BASIC12.81□□□□□ -0.36
Nkd1Q99MH6 Phf21b-201ENSMUST00000016768 3377 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkd1Q99MH6 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nkd1Q99MH6 Otop2-202ENSMUST00000106544 2220 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkd1Q99MH6 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.81□□□□□ -0.36
Nkd1Q99MH6 Sirt3-202ENSMUST00000106048 1416 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkd1Q99MH6 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkd1Q99MH6 Gspt1-205ENSMUST00000167571 3716 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkd1Q99MH6 2310007B03Rik-202ENSMUST00000143419 2074 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkd1Q99MH6 Snrk-203ENSMUST00000120173 4758 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkd1Q99MH6 Phrf1-201ENSMUST00000106027 5248 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
Nkd1Q99MH6 Gm13517-201ENSMUST00000120782 1495 ntBASIC12.81□□□□□ -0.36
Nkd1Q99MH6 Aco1-201ENSMUST00000102973 3832 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkd1Q99MH6 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkd1Q99MH6 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Nkd1Q99MH6 Iqcf1-202ENSMUST00000164965 523 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkd1Q99MH6 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC12.81□□□□□ -0.36
Nkd1Q99MH6 Rian-216ENSMUST00000183215 880 ntTSL 3 BASIC12.81□□□□□ -0.36
Nkd1Q99MH6 Gm10253-201ENSMUST00000194270 940 ntBASIC12.81□□□□□ -0.36
Nkd1Q99MH6 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nkd1Q99MH6 Prdx4-201ENSMUST00000026328 990 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkd1Q99MH6 Gnmt-201ENSMUST00000002846 1035 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkd1Q99MH6 Sbk2-201ENSMUST00000032598 1139 ntAPPRIS P1 TSL 3 BASIC12.81□□□□□ -0.36
Nkd1Q99MH6 Kcnip2-203ENSMUST00000086993 1005 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nkd1Q99MH6 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkd1Q99MH6 Chrdl1-203ENSMUST00000112878 4050 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Nkd1Q99MH6 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkd1Q99MH6 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nkd1Q99MH6 Ddx46-202ENSMUST00000172272 5676 ntAPPRIS P2 TSL 5 BASIC12.81□□□□□ -0.36
Nkd1Q99MH6 Ddx46-201ENSMUST00000099479 5664 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
Nkd1Q99MH6 Grip1-202ENSMUST00000077871 3720 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkd1Q99MH6 Arhgef40-202ENSMUST00000100639 4843 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkd1Q99MH6 Ddx24-202ENSMUST00000110001 3063 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkd1Q99MH6 Tppp-201ENSMUST00000022057 5090 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkd1Q99MH6 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
Nkd1Q99MH6 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkd1Q99MH6 Zfp219-201ENSMUST00000067549 2933 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkd1Q99MH6 Evc2-201ENSMUST00000056365 4091 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkd1Q99MH6 4933416C03Rik-201ENSMUST00000099261 2254 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
Nkd1Q99MH6 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
Nkd1Q99MH6 Gprasp1-201ENSMUST00000113144 5843 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkd1Q99MH6 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkd1Q99MH6 Syt12-201ENSMUST00000059295 3581 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkd1Q99MH6 Atp1a2-201ENSMUST00000085913 6227 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkd1Q99MH6 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkd1Q99MH6 Scin-202ENSMUST00000078481 2654 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nkd1Q99MH6 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nkd1Q99MH6 Rasl10b-203ENSMUST00000164425 3481 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkd1Q99MH6 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.8□□□□□ -0.36
Nkd1Q99MH6 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkd1Q99MH6 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkd1Q99MH6 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC12.8□□□□□ -0.36
Nkd1Q99MH6 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC12.8□□□□□ -0.36
Nkd1Q99MH6 Mir698-201ENSMUST00000102164 109 ntBASIC12.8□□□□□ -0.36
Nkd1Q99MH6 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.8□□□□□ -0.36
Nkd1Q99MH6 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.8□□□□□ -0.36
Nkd1Q99MH6 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.8□□□□□ -0.36
Nkd1Q99MH6 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.8□□□□□ -0.36
Nkd1Q99MH6 Gm7774-201ENSMUST00000200064 533 ntBASIC12.8□□□□□ -0.36
Retrieved 100 of 76,532 protein–RNA pairs in 35.2 ms