Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Gm36236-201ENSMUST00000220780 701 ntTSL 3 BASIC12.12□□□□□ -0.47
Thumpd1Q99J36 Mrpl34-201ENSMUST00000048914 607 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd1Q99J36 Gm10073-201ENSMUST00000073722 496 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Thumpd1Q99J36 Rplp1-201ENSMUST00000008036 499 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd1Q99J36 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd1Q99J36 Aip-202ENSMUST00000117831 1378 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd1Q99J36 AC131586.3-201ENSMUST00000228355 1367 ntBASIC12.12□□□□□ -0.47
Thumpd1Q99J36 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd1Q99J36 Blzf1-203ENSMUST00000120447 2430 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd1Q99J36 Tsku-204ENSMUST00000165901 2514 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd1Q99J36 Pxdn-202ENSMUST00000122328 6614 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd1Q99J36 Crtc1-201ENSMUST00000076615 5683 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd1Q99J36 Zc3h7b-201ENSMUST00000109554 5958 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd1Q99J36 Sgce-205ENSMUST00000115579 1696 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd1Q99J36 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC12.12□□□□□ -0.47
Thumpd1Q99J36 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd1Q99J36 Stim1-201ENSMUST00000033289 4085 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd1Q99J36 Vwa8-201ENSMUST00000040990 7054 ntAPPRIS P2 TSL 5 BASIC12.12□□□□□ -0.47
Thumpd1Q99J36 Elf3-201ENSMUST00000003135 2095 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd1Q99J36 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd1Q99J36 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd1Q99J36 Reln-201ENSMUST00000062372 10885 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Thumpd1Q99J36 BC003331-205ENSMUST00000111913 3273 ntAPPRIS P3 TSL 5 BASIC12.12□□□□□ -0.47
Thumpd1Q99J36 Catsper3-202ENSMUST00000109898 1311 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thumpd1Q99J36 Gm11611-201ENSMUST00000134289 1326 ntTSL 3 BASIC12.11□□□□□ -0.47
Thumpd1Q99J36 1700029J07Rik-202ENSMUST00000098786 1340 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thumpd1Q99J36 Esrrb-203ENSMUST00000110204 4196 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Thumpd1Q99J36 2810408A11Rik-202ENSMUST00000100969 1437 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thumpd1Q99J36 C920006O11Rik-201ENSMUST00000180974 1444 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Thumpd1Q99J36 Acaa2-201ENSMUST00000041053 1515 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thumpd1Q99J36 Hnrnph2-201ENSMUST00000050331 1701 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Thumpd1Q99J36 Cd80-201ENSMUST00000099816 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thumpd1Q99J36 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thumpd1Q99J36 Ubqln5-201ENSMUST00000053743 1915 ntAPPRIS P1 BASIC12.11□□□□□ -0.47
Thumpd1Q99J36 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thumpd1Q99J36 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thumpd1Q99J36 Ppp1r18-205ENSMUST00000187690 3185 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thumpd1Q99J36 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thumpd1Q99J36 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.11□□□□□ -0.47
Thumpd1Q99J36 Btrc-202ENSMUST00000111936 2064 ntAPPRIS ALT1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thumpd1Q99J36 Acbd5-213ENSMUST00000227809 1986 ntAPPRIS ALT2 BASIC12.11□□□□□ -0.47
Thumpd1Q99J36 Gm43134-201ENSMUST00000199434 1886 ntBASIC12.11□□□□□ -0.47
Thumpd1Q99J36 Sept1-202ENSMUST00000106314 1486 ntAPPRIS P2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thumpd1Q99J36 Cgrrf1-204ENSMUST00000140114 419 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Thumpd1Q99J36 1700110K17Rik-202ENSMUST00000156511 927 ntTSL 1 (best) BASIC12.11□□□□□ -0.47
Thumpd1Q99J36 Sox2ot-202ENSMUST00000196058 753 ntTSL 3 BASIC12.11□□□□□ -0.47
Thumpd1Q99J36 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.11□□□□□ -0.47
Thumpd1Q99J36 Gm10459-201ENSMUST00000202708 1155 ntBASIC12.11□□□□□ -0.47
Thumpd1Q99J36 Cox7a2l-201ENSMUST00000025095 1078 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thumpd1Q99J36 Ndufc2-201ENSMUST00000032882 683 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thumpd1Q99J36 Bccip-201ENSMUST00000033282 1244 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thumpd1Q99J36 Mir497b-201ENSMUST00000093601 125 ntBASIC12.11□□□□□ -0.47
Thumpd1Q99J36 Dhx37-201ENSMUST00000169485 4760 ntAPPRIS P1 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thumpd1Q99J36 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thumpd1Q99J36 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC12.11□□□□□ -0.47
Thumpd1Q99J36 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thumpd1Q99J36 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.11□□□□□ -0.47
Thumpd1Q99J36 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thumpd1Q99J36 Fam221a-202ENSMUST00000121903 1304 ntAPPRIS ALT2 TSL 1 (best) BASIC12.11□□□□□ -0.47
Thumpd1Q99J36 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC12.11□□□□□ -0.47
Thumpd1Q99J36 4933412A08Rik-201ENSMUST00000061046 1343 ntBASIC12.11□□□□□ -0.47
Thumpd1Q99J36 P4ha2-215ENSMUST00000174616 2094 ntTSL 5 BASIC12.1□□□□□ -0.47
Thumpd1Q99J36 Sppl2a-201ENSMUST00000028844 5616 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Thumpd1Q99J36 Ddx39b-202ENSMUST00000172549 1770 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Thumpd1Q99J36 Gm26551-201ENSMUST00000181262 2432 ntTSL 5 BASIC12.1□□□□□ -0.47
Thumpd1Q99J36 Dph3-202ENSMUST00000067955 2953 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Thumpd1Q99J36 Xpr1-203ENSMUST00000111775 4094 ntTSL 5 BASIC12.1□□□□□ -0.47
Thumpd1Q99J36 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Thumpd1Q99J36 Sp9-201ENSMUST00000090813 4514 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Thumpd1Q99J36 Edc3-201ENSMUST00000043990 5708 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Thumpd1Q99J36 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.1□□□□□ -0.47
Thumpd1Q99J36 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Thumpd1Q99J36 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Thumpd1Q99J36 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Thumpd1Q99J36 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Thumpd1Q99J36 Bcas3-201ENSMUST00000074875 2814 ntAPPRIS P3 TSL 5 BASIC12.1□□□□□ -0.47
Thumpd1Q99J36 Prmt7-203ENSMUST00000109297 1094 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Thumpd1Q99J36 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.1□□□□□ -0.47
Thumpd1Q99J36 C030037D09Rik-202ENSMUST00000136201 1216 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Thumpd1Q99J36 Plpp7-202ENSMUST00000140762 634 ntTSL 3 BASIC12.1□□□□□ -0.47
Thumpd1Q99J36 Mkln1os-202ENSMUST00000144232 964 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Thumpd1Q99J36 Snx15-207ENSMUST00000154601 767 ntTSL 5 BASIC12.1□□□□□ -0.47
Thumpd1Q99J36 1190007I07Rik-202ENSMUST00000176200 586 ntAPPRIS P1 TSL 2 BASIC12.1□□□□□ -0.47
Thumpd1Q99J36 Gm3764-206ENSMUST00000181356 1088 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Thumpd1Q99J36 4930432H08Rik-201ENSMUST00000198220 1284 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Thumpd1Q99J36 Mlnr-ps-201ENSMUST00000208959 969 ntBASIC12.1□□□□□ -0.47
Thumpd1Q99J36 1700128F08Rik-202ENSMUST00000213708 717 ntBASIC12.1□□□□□ -0.47
Thumpd1Q99J36 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Thumpd1Q99J36 Mrps36-202ENSMUST00000078573 571 ntAPPRIS ALT1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Thumpd1Q99J36 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC12.1□□□□□ -0.47
Thumpd1Q99J36 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Thumpd1Q99J36 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Thumpd1Q99J36 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Thumpd1Q99J36 Ptk2-201ENSMUST00000110036 4184 ntAPPRIS P2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Thumpd1Q99J36 Rad52-201ENSMUST00000032269 1617 ntAPPRIS P3 TSL 1 (best) BASIC12.1□□□□□ -0.47
Thumpd1Q99J36 Cnppd1-201ENSMUST00000041213 2429 ntAPPRIS P1 TSL 1 (best) BASIC12.1□□□□□ -0.47
Thumpd1Q99J36 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC12.1□□□□□ -0.47
Thumpd1Q99J36 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.1□□□□□ -0.47
Thumpd1Q99J36 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.1□□□□□ -0.47
Thumpd1Q99J36 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC12.1□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 29.1 ms