Protein–RNA interactions for Protein: Q91XY8

Pcdhga11, Protocadherin gamma A11, mousemouse

Predictions only

Length 933 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdhga11Q91XY8 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga11Q91XY8 Ncr3-ps-201ENSMUST00000134687 525 ntBASIC13.18□□□□□ -0.3
Pcdhga11Q91XY8 Gm11515-201ENSMUST00000150818 701 ntTSL 2 BASIC13.18□□□□□ -0.3
Pcdhga11Q91XY8 Gm6283-201ENSMUST00000182369 1000 ntBASIC13.18□□□□□ -0.3
Pcdhga11Q91XY8 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.18□□□□□ -0.3
Pcdhga11Q91XY8 Olfr975-201ENSMUST00000054067 933 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Pcdhga11Q91XY8 Tmem116-202ENSMUST00000060004 1297 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga11Q91XY8 Hist1h2aa-201ENSMUST00000072391 390 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Pcdhga11Q91XY8 Olfr554-201ENSMUST00000098221 954 ntAPPRIS P1 BASIC13.18□□□□□ -0.3
Pcdhga11Q91XY8 Zkscan14-203ENSMUST00000198959 2243 ntBASIC13.18□□□□□ -0.3
Pcdhga11Q91XY8 Tnpo2-201ENSMUST00000093360 4863 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga11Q91XY8 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga11Q91XY8 Fnbp4-201ENSMUST00000013759 4691 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga11Q91XY8 Gpsm1-204ENSMUST00000114134 2043 ntTSL 3 BASIC13.18□□□□□ -0.3
Pcdhga11Q91XY8 Ltbp4-204ENSMUST00000118961 3444 ntTSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga11Q91XY8 Arhgap33-203ENSMUST00000207858 4337 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga11Q91XY8 Ginm1-204ENSMUST00000124838 1525 ntAPPRIS ALT2 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga11Q91XY8 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga11Q91XY8 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.18□□□□□ -0.3
Pcdhga11Q91XY8 Cap2-201ENSMUST00000021802 3713 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga11Q91XY8 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga11Q91XY8 Dpysl5-202ENSMUST00000101442 1309 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga11Q91XY8 Gbgt1-203ENSMUST00000163121 1335 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Pcdhga11Q91XY8 Il17rd-203ENSMUST00000225146 3366 ntBASIC13.17□□□□□ -0.3
Pcdhga11Q91XY8 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC13.17□□□□□ -0.3
Pcdhga11Q91XY8 Psph-201ENSMUST00000031399 1733 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga11Q91XY8 Ankrd61-201ENSMUST00000079624 1720 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga11Q91XY8 Cep85-201ENSMUST00000040271 3893 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga11Q91XY8 Aspg-201ENSMUST00000079400 2722 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga11Q91XY8 Hsf4-206ENSMUST00000173859 1576 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga11Q91XY8 Btnl2-202ENSMUST00000178562 2563 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Pcdhga11Q91XY8 Gm19434-201ENSMUST00000204330 2573 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga11Q91XY8 Btnl2-201ENSMUST00000025198 2564 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga11Q91XY8 Msmp-201ENSMUST00000107884 743 ntAPPRIS P1 TSL 3 BASIC13.17□□□□□ -0.3
Pcdhga11Q91XY8 Gm3054-201ENSMUST00000111075 265 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdhga11Q91XY8 Tgfb1i1-203ENSMUST00000163609 1053 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdhga11Q91XY8 Bricd5-202ENSMUST00000164508 701 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga11Q91XY8 Gm17399-201ENSMUST00000181824 1181 ntTSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga11Q91XY8 Smim22-206ENSMUST00000184256 381 ntTSL 3 BASIC13.17□□□□□ -0.3
Pcdhga11Q91XY8 Gm30191-201ENSMUST00000205501 647 ntAPPRIS P1 TSL 5 BASIC13.17□□□□□ -0.3
Pcdhga11Q91XY8 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC13.17□□□□□ -0.3
Pcdhga11Q91XY8 Gm5425-201ENSMUST00000214125 459 ntBASIC13.17□□□□□ -0.3
Pcdhga11Q91XY8 AC154595.3-201ENSMUST00000224579 384 ntBASIC13.17□□□□□ -0.3
Pcdhga11Q91XY8 Mip-201ENSMUST00000026455 2144 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga11Q91XY8 Iqcf3-201ENSMUST00000062917 1131 ntAPPRIS P2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga11Q91XY8 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC13.17□□□□□ -0.3
Pcdhga11Q91XY8 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga11Q91XY8 Slc5a11-201ENSMUST00000033035 2396 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga11Q91XY8 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga11Q91XY8 Ywhaq-201ENSMUST00000049531 1515 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga11Q91XY8 Ppp4r3b-201ENSMUST00000020755 5125 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga11Q91XY8 Gm8337-201ENSMUST00000187358 1938 ntBASIC13.17□□□□□ -0.3
Pcdhga11Q91XY8 Gm37437-201ENSMUST00000194451 1937 ntBASIC13.17□□□□□ -0.3
Pcdhga11Q91XY8 Kif5c-201ENSMUST00000028102 6856 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga11Q91XY8 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.17□□□□□ -0.3
Pcdhga11Q91XY8 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga11Q91XY8 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga11Q91XY8 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga11Q91XY8 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC13.17□□□□□ -0.3
Pcdhga11Q91XY8 Gm5639-201ENSMUST00000122305 2403 ntBASIC13.17□□□□□ -0.3
Pcdhga11Q91XY8 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC13.17□□□□□ -0.3
Pcdhga11Q91XY8 Ildr2-201ENSMUST00000111416 8251 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhga11Q91XY8 Gm39377-201ENSMUST00000214587 2533 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdhga11Q91XY8 Adam22-207ENSMUST00000115388 9161 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Pcdhga11Q91XY8 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhga11Q91XY8 Zfp354a-202ENSMUST00000102766 2592 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhga11Q91XY8 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC13.16□□□□□ -0.3
Pcdhga11Q91XY8 Gm15393-201ENSMUST00000120499 219 ntBASIC13.16□□□□□ -0.3
Pcdhga11Q91XY8 Gm15384-201ENSMUST00000138832 486 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdhga11Q91XY8 Gm15825-201ENSMUST00000159108 918 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhga11Q91XY8 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdhga11Q91XY8 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhga11Q91XY8 Scfd2-203ENSMUST00000113542 2279 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhga11Q91XY8 Lingo1-202ENSMUST00000114247 2287 ntTSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhga11Q91XY8 Notch1-201ENSMUST00000028288 9488 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhga11Q91XY8 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhga11Q91XY8 AC158633.2-201ENSMUST00000222959 6046 ntTSL 5 BASIC13.16□□□□□ -0.3
Pcdhga11Q91XY8 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhga11Q91XY8 Cyp1b1-201ENSMUST00000024894 5128 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhga11Q91XY8 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Pcdhga11Q91XY8 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhga11Q91XY8 Dsp-202ENSMUST00000127906 7761 ntAPPRIS ALT2 TSL 5 BASIC13.16□□□□□ -0.3
Pcdhga11Q91XY8 Unc119b-201ENSMUST00000060798 3659 ntAPPRIS P1 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhga11Q91XY8 Zyx-202ENSMUST00000164375 3188 ntAPPRIS P3 TSL 1 (best) BASIC13.16□□□□□ -0.3
Pcdhga11Q91XY8 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhga11Q91XY8 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhga11Q91XY8 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC13.15□□□□□ -0.3
Pcdhga11Q91XY8 Proser3-202ENSMUST00000108165 2466 ntAPPRIS P2 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhga11Q91XY8 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhga11Q91XY8 Nxph1-201ENSMUST00000060369 2578 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhga11Q91XY8 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhga11Q91XY8 Rpl17-ps10-201ENSMUST00000119383 555 ntBASIC13.15□□□□□ -0.3
Pcdhga11Q91XY8 Rpl17-ps9-201ENSMUST00000119541 555 ntBASIC13.15□□□□□ -0.3
Pcdhga11Q91XY8 Rpl17-ps4-201ENSMUST00000120241 555 ntBASIC13.15□□□□□ -0.3
Pcdhga11Q91XY8 Gm7820-201ENSMUST00000121012 1052 ntBASIC13.15□□□□□ -0.3
Pcdhga11Q91XY8 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhga11Q91XY8 Gm14104-201ENSMUST00000135990 356 ntTSL 5 BASIC13.15□□□□□ -0.3
Pcdhga11Q91XY8 A930015D03Rik-201ENSMUST00000173900 1111 ntTSL 1 (best) BASIC13.15□□□□□ -0.3
Pcdhga11Q91XY8 Gpx4-207ENSMUST00000183037 735 ntTSL 2 BASIC13.15□□□□□ -0.3
Pcdhga11Q91XY8 Gm37277-201ENSMUST00000194052 1111 ntBASIC13.15□□□□□ -0.3
Retrieved 100 of 76,532 protein–RNA pairs in 58.9 ms