Protein–RNA interactions for Protein: Q8R1T1

Chmp7, Charged multivesicular body protein 7, mousemouse

Predictions only

Length 451 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chmp7Q8R1T1 Grik5-201ENSMUST00000003468 3763 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp7Q8R1T1 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp7Q8R1T1 Msh2-201ENSMUST00000024967 3283 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp7Q8R1T1 Rap1gap-203ENSMUST00000105835 4140 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Chmp7Q8R1T1 Glipr2-202ENSMUST00000107855 1816 ntTSL 2 BASIC17.31■□□□□ 0.36
Chmp7Q8R1T1 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp7Q8R1T1 Gm29455-201ENSMUST00000186504 2659 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp7Q8R1T1 Rgs20-201ENSMUST00000002533 1778 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp7Q8R1T1 Synj1-203ENSMUST00000121759 7090 ntAPPRIS P4 TSL 5 BASIC17.31■□□□□ 0.36
Chmp7Q8R1T1 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp7Q8R1T1 N6amt1-203ENSMUST00000118310 1700 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp7Q8R1T1 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC17.31■□□□□ 0.36
Chmp7Q8R1T1 Rims1-201ENSMUST00000081544 5954 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
Chmp7Q8R1T1 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp7Q8R1T1 Polr3c-202ENSMUST00000125183 923 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp7Q8R1T1 Gm11751-201ENSMUST00000126187 460 ntTSL 3 BASIC17.31■□□□□ 0.36
Chmp7Q8R1T1 Gm7029-201ENSMUST00000173226 450 ntBASIC17.31■□□□□ 0.36
Chmp7Q8R1T1 Gm43118-201ENSMUST00000199149 775 ntBASIC17.31■□□□□ 0.36
Chmp7Q8R1T1 Rwdd3-201ENSMUST00000039761 1145 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp7Q8R1T1 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp7Q8R1T1 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp7Q8R1T1 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp7Q8R1T1 Pxdn-201ENSMUST00000118321 2698 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp7Q8R1T1 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Chmp7Q8R1T1 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp7Q8R1T1 Gjd2-201ENSMUST00000090275 2879 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp7Q8R1T1 Slc2a6-201ENSMUST00000045702 2138 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp7Q8R1T1 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp7Q8R1T1 Snx14-204ENSMUST00000165315 3109 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp7Q8R1T1 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp7Q8R1T1 Allc-202ENSMUST00000110917 1384 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp7Q8R1T1 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC17.3■□□□□ 0.36
Chmp7Q8R1T1 Exosc5-206ENSMUST00000206561 1680 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp7Q8R1T1 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp7Q8R1T1 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC17.3■□□□□ 0.36
Chmp7Q8R1T1 Raver1-202ENSMUST00000217282 4234 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
Chmp7Q8R1T1 Rps8-201ENSMUST00000102696 860 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp7Q8R1T1 Gm13123-201ENSMUST00000122173 492 ntBASIC17.3■□□□□ 0.36
Chmp7Q8R1T1 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC17.3■□□□□ 0.36
Chmp7Q8R1T1 Sumo3-206ENSMUST00000141228 772 ntTSL 3 BASIC17.3■□□□□ 0.36
Chmp7Q8R1T1 Gm27501-201ENSMUST00000183599 107 ntBASIC17.3■□□□□ 0.36
Chmp7Q8R1T1 Gm38266-201ENSMUST00000194931 421 ntBASIC17.3■□□□□ 0.36
Chmp7Q8R1T1 Gm42627-201ENSMUST00000197347 224 ntBASIC17.3■□□□□ 0.36
Chmp7Q8R1T1 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC17.3■□□□□ 0.36
Chmp7Q8R1T1 Tyms-ps-201ENSMUST00000219550 915 ntBASIC17.3■□□□□ 0.36
Chmp7Q8R1T1 Olfr463-201ENSMUST00000081417 936 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Chmp7Q8R1T1 Rpl10-201ENSMUST00000008826 799 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp7Q8R1T1 Tmem164-202ENSMUST00000101198 4443 ntTSL 3 BASIC17.3■□□□□ 0.36
Chmp7Q8R1T1 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Chmp7Q8R1T1 Foxi2-201ENSMUST00000060356 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp7Q8R1T1 Hnf4a-202ENSMUST00000109411 4362 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp7Q8R1T1 Sox21-201ENSMUST00000170662 3799 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Chmp7Q8R1T1 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp7Q8R1T1 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp7Q8R1T1 Eif4g1-201ENSMUST00000044783 5444 ntAPPRIS P3 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp7Q8R1T1 Skp1a-201ENSMUST00000037324 1440 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Chmp7Q8R1T1 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp7Q8R1T1 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC17.29■□□□□ 0.36
Chmp7Q8R1T1 Dlk1-204ENSMUST00000109843 1300 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp7Q8R1T1 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp7Q8R1T1 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp7Q8R1T1 AU040320-202ENSMUST00000102607 4191 ntAPPRIS P4 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp7Q8R1T1 Sgsm1-201ENSMUST00000048112 5161 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp7Q8R1T1 Adamts15-201ENSMUST00000065112 5928 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp7Q8R1T1 Crb3-204ENSMUST00000163763 868 ntAPPRIS P3 TSL 2 BASIC17.29■□□□□ 0.36
Chmp7Q8R1T1 Gm25927-201ENSMUST00000175058 117 ntBASIC17.29■□□□□ 0.36
Chmp7Q8R1T1 1600014C23Rik-201ENSMUST00000178179 518 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp7Q8R1T1 Gm27516-201ENSMUST00000184237 98 ntBASIC17.29■□□□□ 0.36
Chmp7Q8R1T1 Mir8109-201ENSMUST00000184375 117 ntBASIC17.29■□□□□ 0.36
Chmp7Q8R1T1 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC17.29■□□□□ 0.36
Chmp7Q8R1T1 Gm43822-201ENSMUST00000200285 476 ntBASIC17.29■□□□□ 0.36
Chmp7Q8R1T1 Gm3961-201ENSMUST00000204425 994 ntBASIC17.29■□□□□ 0.36
Chmp7Q8R1T1 AC134254.1-201ENSMUST00000221362 167 ntBASIC17.29■□□□□ 0.36
Chmp7Q8R1T1 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp7Q8R1T1 Timm10-201ENSMUST00000028470 690 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp7Q8R1T1 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp7Q8R1T1 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC17.29■□□□□ 0.36
Chmp7Q8R1T1 Trpt1-201ENSMUST00000088223 1142 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp7Q8R1T1 Trib1-201ENSMUST00000067543 4330 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp7Q8R1T1 Yes1-201ENSMUST00000072311 4586 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp7Q8R1T1 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp7Q8R1T1 Casc4-201ENSMUST00000078752 4215 ntTSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp7Q8R1T1 Rab9b-201ENSMUST00000058814 3980 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp7Q8R1T1 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp7Q8R1T1 Gm8706-201ENSMUST00000197372 1491 ntBASIC17.29■□□□□ 0.36
Chmp7Q8R1T1 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC17.29■□□□□ 0.36
Chmp7Q8R1T1 Gm12500-202ENSMUST00000186471 2428 ntBASIC17.29■□□□□ 0.36
Chmp7Q8R1T1 Pak1-205ENSMUST00000206984 2794 ntAPPRIS P1 TSL 5 BASIC17.28■□□□□ 0.36
Chmp7Q8R1T1 Wfdc1-201ENSMUST00000024107 1371 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp7Q8R1T1 Lcmt1-201ENSMUST00000033025 1369 ntAPPRIS P2 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp7Q8R1T1 Erp29-203ENSMUST00000130451 5204 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp7Q8R1T1 Cab39-202ENSMUST00000113360 3805 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp7Q8R1T1 Gm15889-202ENSMUST00000212669 2443 ntBASIC17.28■□□□□ 0.36
Chmp7Q8R1T1 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC17.28■□□□□ 0.36
Chmp7Q8R1T1 Ttyh2-201ENSMUST00000045779 3486 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp7Q8R1T1 Prrc2a-206ENSMUST00000174805 6741 ntTSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp7Q8R1T1 Gna13-201ENSMUST00000020930 6160 ntAPPRIS P1 TSL 1 (best) BASIC17.28■□□□□ 0.36
Chmp7Q8R1T1 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC17.28■□□□□ 0.36
Chmp7Q8R1T1 Gm16202-201ENSMUST00000117532 544 ntBASIC17.28■□□□□ 0.36
Chmp7Q8R1T1 Pcp2-206ENSMUST00000144977 534 ntAPPRIS ALT2 TSL 3 BASIC17.28■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 73 ms