Protein–RNA interactions for Protein: Q8K2Z2

Prpf39, Pre-mRNA-processing factor 39, mousemouse

Predictions only

Length 665 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf39Q8K2Z2 Hp-201ENSMUST00000074898 1345 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf39Q8K2Z2 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf39Q8K2Z2 B3gat1-204ENSMUST00000160899 3801 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf39Q8K2Z2 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf39Q8K2Z2 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC14.11□□□□□ -0.15
Prpf39Q8K2Z2 Il1rn-204ENSMUST00000114487 2474 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf39Q8K2Z2 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf39Q8K2Z2 Pcdh7-202ENSMUST00000094783 3752 ntAPPRIS ALT1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf39Q8K2Z2 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.1□□□□□ -0.15
Prpf39Q8K2Z2 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf39Q8K2Z2 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC14.1□□□□□ -0.15
Prpf39Q8K2Z2 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Prpf39Q8K2Z2 Hoxc10-201ENSMUST00000001699 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf39Q8K2Z2 Cnmd-201ENSMUST00000022603 1433 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf39Q8K2Z2 Adamts7-208ENSMUST00000167122 5338 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Prpf39Q8K2Z2 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf39Q8K2Z2 Gm7488-201ENSMUST00000117148 684 ntBASIC14.1□□□□□ -0.15
Prpf39Q8K2Z2 Ldha-ps-201ENSMUST00000119390 995 ntBASIC14.1□□□□□ -0.15
Prpf39Q8K2Z2 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC14.1□□□□□ -0.15
Prpf39Q8K2Z2 1700061E18Rik-201ENSMUST00000154159 588 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf39Q8K2Z2 Gm26464-201ENSMUST00000157094 305 ntBASIC14.1□□□□□ -0.15
Prpf39Q8K2Z2 Gm5866-201ENSMUST00000177881 973 ntBASIC14.1□□□□□ -0.15
Prpf39Q8K2Z2 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC14.1□□□□□ -0.15
Prpf39Q8K2Z2 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC14.1□□□□□ -0.15
Prpf39Q8K2Z2 Olfr683-202ENSMUST00000209879 3841 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Prpf39Q8K2Z2 Gm17330-201ENSMUST00000221047 165 ntBASIC14.1□□□□□ -0.15
Prpf39Q8K2Z2 Gm5161-201ENSMUST00000075243 853 ntBASIC14.1□□□□□ -0.15
Prpf39Q8K2Z2 Trim32-202ENSMUST00000107366 3191 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf39Q8K2Z2 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf39Q8K2Z2 Thnsl2-201ENSMUST00000074241 1821 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Prpf39Q8K2Z2 Cacna2d2-208ENSMUST00000170737 5332 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf39Q8K2Z2 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf39Q8K2Z2 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf39Q8K2Z2 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf39Q8K2Z2 Ephx2-201ENSMUST00000070515 2035 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf39Q8K2Z2 Car3-201ENSMUST00000029076 1679 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf39Q8K2Z2 Folr1-204ENSMUST00000106985 1313 ntAPPRIS P1 TSL 5 BASIC14.1□□□□□ -0.15
Prpf39Q8K2Z2 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf39Q8K2Z2 Dlk2-201ENSMUST00000061722 1532 ntTSL 5 BASIC14.1□□□□□ -0.15
Prpf39Q8K2Z2 Cabp7-201ENSMUST00000009219 2628 ntAPPRIS P1 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf39Q8K2Z2 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.1□□□□□ -0.15
Prpf39Q8K2Z2 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf39Q8K2Z2 Gm18244-201ENSMUST00000219747 1566 ntBASIC14.09□□□□□ -0.15
Prpf39Q8K2Z2 Il12rb1-205ENSMUST00000212657 2741 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Prpf39Q8K2Z2 Sdha-201ENSMUST00000022062 2900 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf39Q8K2Z2 Kmt5c-203ENSMUST00000108583 2177 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf39Q8K2Z2 Mink1-203ENSMUST00000079244 4829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf39Q8K2Z2 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Prpf39Q8K2Z2 Gm7324-201ENSMUST00000094051 1647 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Prpf39Q8K2Z2 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf39Q8K2Z2 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf39Q8K2Z2 Erg-206ENSMUST00000122199 2007 ntAPPRIS ALT1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf39Q8K2Z2 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf39Q8K2Z2 Wnk1-203ENSMUST00000088644 11330 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Prpf39Q8K2Z2 Pik3cd-214ENSMUST00000177654 4765 ntAPPRIS P4 TSL 5 BASIC14.09□□□□□ -0.15
Prpf39Q8K2Z2 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf39Q8K2Z2 Cd63-202ENSMUST00000105229 1043 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf39Q8K2Z2 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf39Q8K2Z2 Ghr-203ENSMUST00000110698 1171 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf39Q8K2Z2 Kir3dl1-201ENSMUST00000113104 1031 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf39Q8K2Z2 Gm15376-201ENSMUST00000122258 783 ntBASIC14.09□□□□□ -0.15
Prpf39Q8K2Z2 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC14.09□□□□□ -0.15
Prpf39Q8K2Z2 Pfdn5-205ENSMUST00000166658 1062 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf39Q8K2Z2 Gm11427-203ENSMUST00000215482 1203 ntTSL 5 BASIC14.09□□□□□ -0.15
Prpf39Q8K2Z2 Cd63-204ENSMUST00000219317 1109 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Prpf39Q8K2Z2 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf39Q8K2Z2 Olfr750-201ENSMUST00000048478 1132 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Prpf39Q8K2Z2 Gm24447-201ENSMUST00000083977 338 ntBASIC14.09□□□□□ -0.15
Prpf39Q8K2Z2 Tspan32-205ENSMUST00000105924 1478 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf39Q8K2Z2 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Prpf39Q8K2Z2 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
Prpf39Q8K2Z2 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC14.09□□□□□ -0.15
Prpf39Q8K2Z2 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf39Q8K2Z2 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.09□□□□□ -0.15
Prpf39Q8K2Z2 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC14.09□□□□□ -0.15
Prpf39Q8K2Z2 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf39Q8K2Z2 Gk5-202ENSMUST00000122383 4455 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf39Q8K2Z2 Slc4a5-201ENSMUST00000039212 5123 ntAPPRIS P2 TSL 5 BASIC14.09□□□□□ -0.15
Prpf39Q8K2Z2 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
Prpf39Q8K2Z2 Scyl3-201ENSMUST00000027876 4368 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
Prpf39Q8K2Z2 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
Prpf39Q8K2Z2 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.08□□□□□ -0.15
Prpf39Q8K2Z2 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Prpf39Q8K2Z2 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Prpf39Q8K2Z2 Axdnd1-204ENSMUST00000178036 3586 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.15
Prpf39Q8K2Z2 Poli-205ENSMUST00000161542 2736 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Prpf39Q8K2Z2 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Prpf39Q8K2Z2 Cnga3-203ENSMUST00000194195 2083 ntAPPRIS P3 TSL 5 BASIC14.08□□□□□ -0.15
Prpf39Q8K2Z2 Ccnc-203ENSMUST00000108240 1406 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
Prpf39Q8K2Z2 Acot6-202ENSMUST00000222921 3622 ntBASIC14.08□□□□□ -0.15
Prpf39Q8K2Z2 Dnajb1-201ENSMUST00000005620 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf39Q8K2Z2 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC14.08□□□□□ -0.16
Prpf39Q8K2Z2 Tfap2a-201ENSMUST00000021787 3487 ntAPPRIS ALT1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf39Q8K2Z2 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf39Q8K2Z2 Gm12462-201ENSMUST00000140826 3056 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf39Q8K2Z2 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf39Q8K2Z2 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf39Q8K2Z2 Mfrp-205ENSMUST00000206308 4037 ntAPPRIS ALT2 TSL 5 BASIC14.08□□□□□ -0.16
Prpf39Q8K2Z2 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
Prpf39Q8K2Z2 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 39.9 ms