Protein–RNA interactions for Protein: Q8CIE6

Copa, Coatomer subunit alpha, mousemouse

Known RBP Predictions only

Length 1,224 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CopaQ8CIE6 Pnpla2-203ENSMUST00000164016 2625 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CopaQ8CIE6 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.18
CopaQ8CIE6 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC13.9□□□□□ -0.18
CopaQ8CIE6 Cuedc2-201ENSMUST00000051234 1833 ntAPPRIS P1 TSL 5 BASIC13.9□□□□□ -0.18
CopaQ8CIE6 Gm6159-201ENSMUST00000191249 1724 ntBASIC13.9□□□□□ -0.18
CopaQ8CIE6 Gm14371-201ENSMUST00000138925 1518 ntBASIC13.9□□□□□ -0.19
CopaQ8CIE6 Klk8-201ENSMUST00000085461 1322 ntAPPRIS P1 TSL 1 (best) BASIC13.9□□□□□ -0.19
CopaQ8CIE6 Trim26-201ENSMUST00000053434 3198 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CopaQ8CIE6 Dhx57-201ENSMUST00000038166 4918 ntAPPRIS P3 TSL 1 (best) BASIC13.89□□□□□ -0.19
CopaQ8CIE6 Pnoc-201ENSMUST00000059339 2157 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CopaQ8CIE6 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CopaQ8CIE6 Gpr108-201ENSMUST00000005975 2095 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CopaQ8CIE6 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC13.89□□□□□ -0.19
CopaQ8CIE6 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
CopaQ8CIE6 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CopaQ8CIE6 Edrf1-201ENSMUST00000051169 5424 ntAPPRIS P2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CopaQ8CIE6 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC13.89□□□□□ -0.19
CopaQ8CIE6 Plcb2-202ENSMUST00000102524 5145 ntAPPRIS P3 TSL 2 BASIC13.89□□□□□ -0.19
CopaQ8CIE6 Apbb2-203ENSMUST00000159512 6632 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CopaQ8CIE6 Zfp683-201ENSMUST00000105884 1471 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CopaQ8CIE6 Inpp5a-202ENSMUST00000097975 2301 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CopaQ8CIE6 Hoxa7-203ENSMUST00000140316 643 ntTSL 3 BASIC13.89□□□□□ -0.19
CopaQ8CIE6 Gm14617-202ENSMUST00000144208 607 ntTSL 3 BASIC13.89□□□□□ -0.19
CopaQ8CIE6 Gm12091-201ENSMUST00000146791 830 ntBASIC13.89□□□□□ -0.19
CopaQ8CIE6 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC13.89□□□□□ -0.19
CopaQ8CIE6 1700022A21Rik-201ENSMUST00000182745 1051 ntBASIC13.89□□□□□ -0.19
CopaQ8CIE6 1700072B07Rik-201ENSMUST00000191141 445 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CopaQ8CIE6 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CopaQ8CIE6 Gm4756-204ENSMUST00000209038 990 ntTSL 5 BASIC13.89□□□□□ -0.19
CopaQ8CIE6 Gm9908-201ENSMUST00000211534 448 ntBASIC13.89□□□□□ -0.19
CopaQ8CIE6 Isca2-201ENSMUST00000021667 883 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CopaQ8CIE6 Alkbh6-201ENSMUST00000060834 982 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CopaQ8CIE6 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CopaQ8CIE6 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CopaQ8CIE6 Cenpo-201ENSMUST00000020981 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC13.89□□□□□ -0.19
CopaQ8CIE6 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CopaQ8CIE6 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CopaQ8CIE6 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC13.89□□□□□ -0.19
CopaQ8CIE6 D930019O06Rik-201ENSMUST00000181841 3663 ntTSL 1 (best) BASIC13.89□□□□□ -0.19
CopaQ8CIE6 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CopaQ8CIE6 Secisbp2l-201ENSMUST00000053699 6797 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CopaQ8CIE6 Brd2-201ENSMUST00000025193 4374 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CopaQ8CIE6 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC13.89□□□□□ -0.19
CopaQ8CIE6 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CopaQ8CIE6 Pbx2-203ENSMUST00000173328 1990 ntTSL 2 BASIC13.89□□□□□ -0.19
CopaQ8CIE6 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CopaQ8CIE6 Grk4-201ENSMUST00000001112 2408 ntAPPRIS P1 TSL 1 (best) BASIC13.89□□□□□ -0.19
CopaQ8CIE6 Gm15163-201ENSMUST00000120749 1302 ntBASIC13.89□□□□□ -0.19
CopaQ8CIE6 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CopaQ8CIE6 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CopaQ8CIE6 Hdgfl2-210ENSMUST00000225843 2238 ntAPPRIS ALT2 BASIC13.88□□□□□ -0.19
CopaQ8CIE6 Cxcl16-201ENSMUST00000019064 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CopaQ8CIE6 Strip2-201ENSMUST00000046028 5370 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CopaQ8CIE6 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.88□□□□□ -0.19
CopaQ8CIE6 Cyp2d11-201ENSMUST00000170255 1590 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CopaQ8CIE6 Gm43796-201ENSMUST00000202853 2012 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CopaQ8CIE6 Acin1-216ENSMUST00000141453 2381 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CopaQ8CIE6 Ntf3-201ENSMUST00000050484 1483 ntAPPRIS P3 TSL 2 BASIC13.88□□□□□ -0.19
CopaQ8CIE6 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CopaQ8CIE6 Srsf1-205ENSMUST00000139129 5362 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CopaQ8CIE6 Leo1-201ENSMUST00000048937 2180 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CopaQ8CIE6 Tm7sf2-203ENSMUST00000159084 1351 ntTSL 5 BASIC13.88□□□□□ -0.19
CopaQ8CIE6 Myh7-201ENSMUST00000102803 6135 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CopaQ8CIE6 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CopaQ8CIE6 Pla2g2e-203ENSMUST00000105804 786 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CopaQ8CIE6 Uqcrq-203ENSMUST00000109021 405 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CopaQ8CIE6 Fcnb-202ENSMUST00000117486 873 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CopaQ8CIE6 Rnd1-203ENSMUST00000120997 856 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CopaQ8CIE6 Gm20499-201ENSMUST00000140374 444 ntAPPRIS P1 TSL 2 BASIC13.88□□□□□ -0.19
CopaQ8CIE6 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC13.88□□□□□ -0.19
CopaQ8CIE6 Ip6k2-210ENSMUST00000194875 748 ntTSL 2 BASIC13.88□□□□□ -0.19
CopaQ8CIE6 Mpv17-207ENSMUST00000201491 923 ntTSL 2 BASIC13.88□□□□□ -0.19
CopaQ8CIE6 Gm42846-201ENSMUST00000201771 514 ntTSL 3 BASIC13.88□□□□□ -0.19
CopaQ8CIE6 AC087891.2-201ENSMUST00000219293 658 ntTSL 5 BASIC13.88□□□□□ -0.19
CopaQ8CIE6 Gm18624-201ENSMUST00000220966 658 ntBASIC13.88□□□□□ -0.19
CopaQ8CIE6 Trib2-204ENSMUST00000221518 1192 ntTSL 5 BASIC13.88□□□□□ -0.19
CopaQ8CIE6 Pla2g2e-201ENSMUST00000030531 854 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CopaQ8CIE6 Gstm1-201ENSMUST00000004140 1289 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CopaQ8CIE6 Hilpda-201ENSMUST00000054445 982 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CopaQ8CIE6 Cd3d-201ENSMUST00000034602 1617 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CopaQ8CIE6 Snx29-207ENSMUST00000180792 2667 ntAPPRIS P1 TSL 5 BASIC13.88□□□□□ -0.19
CopaQ8CIE6 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CopaQ8CIE6 Ate1-202ENSMUST00000035458 4685 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CopaQ8CIE6 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CopaQ8CIE6 Supt6-201ENSMUST00000002121 6488 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CopaQ8CIE6 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CopaQ8CIE6 Itm2b-201ENSMUST00000022704 1796 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CopaQ8CIE6 Gm13883-201ENSMUST00000150450 1404 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CopaQ8CIE6 F420014N23Rik-201ENSMUST00000181578 2396 ntTSL 1 (best) BASIC13.88□□□□□ -0.19
CopaQ8CIE6 Duxf3-202ENSMUST00000176875 2025 ntAPPRIS P1 BASIC13.88□□□□□ -0.19
CopaQ8CIE6 Muc20-201ENSMUST00000041123 2299 ntAPPRIS ALT2 TSL 1 (best) BASIC13.88□□□□□ -0.19
CopaQ8CIE6 Arl6ip6-201ENSMUST00000028336 2548 ntAPPRIS P1 TSL 1 (best) BASIC13.88□□□□□ -0.19
CopaQ8CIE6 Gm9115-201ENSMUST00000120192 1348 ntBASIC13.88□□□□□ -0.19
CopaQ8CIE6 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC13.88□□□□□ -0.19
CopaQ8CIE6 AC139054.1-201ENSMUST00000226898 1598 ntBASIC13.88□□□□□ -0.19
CopaQ8CIE6 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC13.87□□□□□ -0.19
CopaQ8CIE6 Tmem9-201ENSMUST00000063719 1806 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
CopaQ8CIE6 Pkp3-202ENSMUST00000106039 2919 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CopaQ8CIE6 Nrp2-204ENSMUST00000102822 6708 ntAPPRIS ALT2 TSL 1 (best) BASIC13.87□□□□□ -0.19
CopaQ8CIE6 Lpcat1-201ENSMUST00000022099 3675 ntAPPRIS P1 TSL 1 (best) BASIC13.87□□□□□ -0.19
Retrieved 100 of 76,532 protein–RNA pairs in 32.6 ms