Protein–RNA interactions for Protein: Q8C4J0

Ccdc60, Coiled-coil domain-containing protein 60, mousemouse

Predictions only

Length 545 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ccdc60Q8C4J0 Gm12070-201ENSMUST00000119551 1002 ntBASIC17.33■□□□□ 0.36
Ccdc60Q8C4J0 Akirin1-ps-201ENSMUST00000119676 458 ntBASIC17.33■□□□□ 0.36
Ccdc60Q8C4J0 Gm12671-201ENSMUST00000119978 1002 ntBASIC17.33■□□□□ 0.36
Ccdc60Q8C4J0 Gm13292-201ENSMUST00000120014 1000 ntBASIC17.33■□□□□ 0.36
Ccdc60Q8C4J0 Gm12416-201ENSMUST00000120911 1008 ntBASIC17.33■□□□□ 0.36
Ccdc60Q8C4J0 Gm12403-201ENSMUST00000121384 959 ntBASIC17.33■□□□□ 0.36
Ccdc60Q8C4J0 Gm10359-201ENSMUST00000180167 1002 ntBASIC17.33■□□□□ 0.36
Ccdc60Q8C4J0 Gm12033-201ENSMUST00000180654 1002 ntBASIC17.33■□□□□ 0.36
Ccdc60Q8C4J0 Gm5559-201ENSMUST00000180755 1002 ntBASIC17.33■□□□□ 0.36
Ccdc60Q8C4J0 Gm4335-201ENSMUST00000182581 1004 ntBASIC17.33■□□□□ 0.36
Ccdc60Q8C4J0 Mir7654-201ENSMUST00000185082 70 ntBASIC17.33■□□□□ 0.36
Ccdc60Q8C4J0 Gm43691-201ENSMUST00000196625 697 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc60Q8C4J0 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc60Q8C4J0 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc60Q8C4J0 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc60Q8C4J0 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc60Q8C4J0 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC17.33■□□□□ 0.36
Ccdc60Q8C4J0 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC17.33■□□□□ 0.36
Ccdc60Q8C4J0 Rbmx-202ENSMUST00000114726 2108 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc60Q8C4J0 Klhdc8b-207ENSMUST00000193286 2956 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc60Q8C4J0 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc60Q8C4J0 Xlr-202ENSMUST00000067782 1860 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc60Q8C4J0 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc60Q8C4J0 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
Ccdc60Q8C4J0 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC17.32■□□□□ 0.36
Ccdc60Q8C4J0 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc60Q8C4J0 Tfe3-201ENSMUST00000077680 3277 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc60Q8C4J0 A530083I20Rik-201ENSMUST00000180486 2421 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc60Q8C4J0 Gars-201ENSMUST00000003572 2380 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc60Q8C4J0 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc60Q8C4J0 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc60Q8C4J0 Serpinh1-205ENSMUST00000208119 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc60Q8C4J0 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc60Q8C4J0 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc60Q8C4J0 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC17.32■□□□□ 0.36
Ccdc60Q8C4J0 Slc38a1-201ENSMUST00000088452 7266 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc60Q8C4J0 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC17.32■□□□□ 0.36
Ccdc60Q8C4J0 Cobl-208ENSMUST00000172919 2566 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc60Q8C4J0 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc60Q8C4J0 Rab15-204ENSMUST00000122419 856 ntTSL 5 BASIC17.32■□□□□ 0.36
Ccdc60Q8C4J0 Atp5j2-202ENSMUST00000161741 955 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc60Q8C4J0 2410004P03Rik-203ENSMUST00000190691 953 ntTSL 2 BASIC17.32■□□□□ 0.36
Ccdc60Q8C4J0 Smyd3-207ENSMUST00000194237 1047 ntTSL 2 BASIC17.32■□□□□ 0.36
Ccdc60Q8C4J0 Gm18307-201ENSMUST00000206864 949 ntBASIC17.32■□□□□ 0.36
Ccdc60Q8C4J0 Ndufs6-201ENSMUST00000022097 568 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc60Q8C4J0 Zmat5-201ENSMUST00000009220 792 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc60Q8C4J0 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc60Q8C4J0 Taok2-201ENSMUST00000071268 4720 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc60Q8C4J0 Spock2-201ENSMUST00000121820 5238 ntAPPRIS P2 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc60Q8C4J0 Ugt1a5-201ENSMUST00000097659 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc60Q8C4J0 Zfp711-202ENSMUST00000113409 4330 ntAPPRIS P2 TSL 5 BASIC17.32■□□□□ 0.36
Ccdc60Q8C4J0 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc60Q8C4J0 Gm11405-201ENSMUST00000118689 1556 ntBASIC17.32■□□□□ 0.36
Ccdc60Q8C4J0 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
Ccdc60Q8C4J0 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc60Q8C4J0 Pde4a-203ENSMUST00000115458 2962 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc60Q8C4J0 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC17.31■□□□□ 0.36
Ccdc60Q8C4J0 Spata5-209ENSMUST00000198968 2916 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc60Q8C4J0 Mark2-209ENSMUST00000165965 2874 ntAPPRIS P4 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc60Q8C4J0 Gm10729-202ENSMUST00000193403 1375 ntBASIC17.31■□□□□ 0.36
Ccdc60Q8C4J0 Ttc8-202ENSMUST00000085109 2272 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc60Q8C4J0 Amz1-201ENSMUST00000060918 2683 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc60Q8C4J0 Gm11978-202ENSMUST00000127510 1303 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc60Q8C4J0 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC17.31■□□□□ 0.36
Ccdc60Q8C4J0 Gm15678-201ENSMUST00000117573 960 ntBASIC17.31■□□□□ 0.36
Ccdc60Q8C4J0 Gm23984-201ENSMUST00000157139 203 ntBASIC17.31■□□□□ 0.36
Ccdc60Q8C4J0 Gm17870-201ENSMUST00000219489 1174 ntBASIC17.31■□□□□ 0.36
Ccdc60Q8C4J0 Tmco5b-201ENSMUST00000040856 1237 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc60Q8C4J0 Gm6180-201ENSMUST00000065243 498 ntBASIC17.31■□□□□ 0.36
Ccdc60Q8C4J0 Itgav-201ENSMUST00000028499 7054 ntAPPRIS P2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc60Q8C4J0 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc60Q8C4J0 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc60Q8C4J0 Tmem220-201ENSMUST00000061786 1597 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc60Q8C4J0 Trappc9-203ENSMUST00000168191 3127 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc60Q8C4J0 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc60Q8C4J0 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
Ccdc60Q8C4J0 Cd1d1-202ENSMUST00000063869 1421 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc60Q8C4J0 Chst10-205ENSMUST00000193441 4999 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc60Q8C4J0 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc60Q8C4J0 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc60Q8C4J0 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc60Q8C4J0 Eps8l1-214ENSMUST00000171445 2975 ntAPPRIS ALT2 TSL 5 BASIC17.3■□□□□ 0.36
Ccdc60Q8C4J0 Tbkbp1-205ENSMUST00000118375 3288 ntAPPRIS P2 TSL 5 BASIC17.3■□□□□ 0.36
Ccdc60Q8C4J0 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC17.3■□□□□ 0.36
Ccdc60Q8C4J0 Ndufa13-201ENSMUST00000110167 1251 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc60Q8C4J0 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
Ccdc60Q8C4J0 Boll-202ENSMUST00000114423 1106 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc60Q8C4J0 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC17.3■□□□□ 0.36
Ccdc60Q8C4J0 Mecp2-204ENSMUST00000140399 1168 ntTSL 5 BASIC17.3■□□□□ 0.36
Ccdc60Q8C4J0 9330198N18Rik-201ENSMUST00000146702 1247 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc60Q8C4J0 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc60Q8C4J0 Gm29608-201ENSMUST00000190444 463 ntBASIC17.3■□□□□ 0.36
Ccdc60Q8C4J0 Gm18018-201ENSMUST00000198273 408 ntBASIC17.3■□□□□ 0.36
Ccdc60Q8C4J0 Fam162a-201ENSMUST00000004057 635 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc60Q8C4J0 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc60Q8C4J0 Rpn2-202ENSMUST00000116380 2756 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc60Q8C4J0 Tdrd6-203ENSMUST00000168073 7062 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc60Q8C4J0 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc60Q8C4J0 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Ccdc60Q8C4J0 Ptprs-202ENSMUST00000086828 5608 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
Retrieved 100 of 76,532 protein–RNA pairs in 28.1 ms