Protein–RNA interactions for Protein: Q8BRF7

Scfd1, Sec1 family domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 639 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scfd1Q8BRF7 Tmem52-204ENSMUST00000178188 908 ntAPPRIS ALT2 TSL 2 BASIC15.47■□□□□ 0.07
Scfd1Q8BRF7 Tmem52-205ENSMUST00000178238 968 ntAPPRIS P4 TSL 1 (best) BASIC15.47■□□□□ 0.07
Scfd1Q8BRF7 Gm27514-201ENSMUST00000183692 110 ntBASIC15.47■□□□□ 0.07
Scfd1Q8BRF7 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Scfd1Q8BRF7 Olfr533-203ENSMUST00000215308 2345 ntAPPRIS P1 TSL 5 BASIC15.47■□□□□ 0.07
Scfd1Q8BRF7 Lsm7-208ENSMUST00000220225 1129 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Scfd1Q8BRF7 Gm36264-202ENSMUST00000221989 1142 ntTSL 5 BASIC15.47■□□□□ 0.07
Scfd1Q8BRF7 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Scfd1Q8BRF7 Gm9955-201ENSMUST00000067987 309 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Scfd1Q8BRF7 Capg-201ENSMUST00000071044 1247 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Scfd1Q8BRF7 Sfta3-ps-201ENSMUST00000218376 2128 ntTSL 1 (best) BASIC15.47■□□□□ 0.07
Scfd1Q8BRF7 Usp33-201ENSMUST00000026507 4153 ntAPPRIS ALT2 TSL 1 (best) BASIC15.47■□□□□ 0.07
Scfd1Q8BRF7 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC15.47■□□□□ 0.07
Scfd1Q8BRF7 Cyth2-208ENSMUST00000211783 1983 ntTSL 5 BASIC15.47■□□□□ 0.07
Scfd1Q8BRF7 Slc5a6-202ENSMUST00000114668 3436 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Scfd1Q8BRF7 Dnajc30-201ENSMUST00000071263 1661 ntAPPRIS P1 BASIC15.47■□□□□ 0.07
Scfd1Q8BRF7 Dusp15-203ENSMUST00000123121 2993 ntAPPRIS P1 TSL 3 BASIC15.47■□□□□ 0.07
Scfd1Q8BRF7 Sh3glb1-201ENSMUST00000163279 3961 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Scfd1Q8BRF7 N4bp3-201ENSMUST00000001080 2367 ntAPPRIS P1 TSL 1 (best) BASIC15.47■□□□□ 0.07
Scfd1Q8BRF7 Gm10676-201ENSMUST00000098778 3221 ntBASIC15.47■□□□□ 0.07
Scfd1Q8BRF7 Gm37133-201ENSMUST00000192705 1922 ntBASIC15.47■□□□□ 0.07
Scfd1Q8BRF7 Arfgap1-203ENSMUST00000108860 2326 ntAPPRIS ALT2 TSL 1 (best) BASIC15.46■□□□□ 0.07
Scfd1Q8BRF7 Gm26880-201ENSMUST00000181610 1318 ntTSL 5 BASIC15.46■□□□□ 0.07
Scfd1Q8BRF7 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Scfd1Q8BRF7 Cyp2f2-201ENSMUST00000003100 1866 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Scfd1Q8BRF7 Gm12500-202ENSMUST00000186471 2428 ntBASIC15.46■□□□□ 0.07
Scfd1Q8BRF7 Ctnna2-204ENSMUST00000160894 4162 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Scfd1Q8BRF7 Crybg1-201ENSMUST00000020017 6608 ntAPPRIS P2 TSL 5 BASIC15.46■□□□□ 0.07
Scfd1Q8BRF7 Vax2os-201ENSMUST00000123402 1435 ntTSL 5 BASIC15.46■□□□□ 0.07
Scfd1Q8BRF7 Gbe1-207ENSMUST00000171132 3303 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Scfd1Q8BRF7 Zfp839-201ENSMUST00000170060 3723 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Scfd1Q8BRF7 Magi1-202ENSMUST00000089317 7209 ntAPPRIS P3 TSL 1 (best) BASIC15.46■□□□□ 0.07
Scfd1Q8BRF7 Mad2l2-203ENSMUST00000105707 949 ntTSL 3 BASIC15.46■□□□□ 0.07
Scfd1Q8BRF7 Mapkapk5-205ENSMUST00000111786 975 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Scfd1Q8BRF7 Gm13369-201ENSMUST00000119442 987 ntBASIC15.46■□□□□ 0.07
Scfd1Q8BRF7 Gm1335-201ENSMUST00000121653 386 ntBASIC15.46■□□□□ 0.07
Scfd1Q8BRF7 Ccdc103-202ENSMUST00000159834 1156 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Scfd1Q8BRF7 Mad2l1bp-201ENSMUST00000171172 1269 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Scfd1Q8BRF7 2310040G24Rik-202ENSMUST00000189386 775 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Scfd1Q8BRF7 Gm43763-201ENSMUST00000201761 683 ntTSL 3 BASIC15.46■□□□□ 0.07
Scfd1Q8BRF7 Apoa5-203ENSMUST00000213878 727 ntTSL 3 BASIC15.46■□□□□ 0.07
Scfd1Q8BRF7 4930502A04Rik-201ENSMUST00000214059 865 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Scfd1Q8BRF7 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Scfd1Q8BRF7 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Scfd1Q8BRF7 H2afv-201ENSMUST00000093346 519 ntTSL 1 (best) BASIC15.46■□□□□ 0.07
Scfd1Q8BRF7 Fbxo3-201ENSMUST00000028603 4740 ntAPPRIS P4 TSL 1 (best) BASIC15.46■□□□□ 0.07
Scfd1Q8BRF7 Apln-201ENSMUST00000039026 3149 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.07
Scfd1Q8BRF7 F11r-201ENSMUST00000043839 2518 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Scfd1Q8BRF7 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Scfd1Q8BRF7 Foxo3-203ENSMUST00000105502 6848 ntAPPRIS P1 TSL 1 (best) BASIC15.46■□□□□ 0.06
Scfd1Q8BRF7 Rps13-203ENSMUST00000205490 1317 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Scfd1Q8BRF7 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scfd1Q8BRF7 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Scfd1Q8BRF7 AC096628.2-201ENSMUST00000225443 1413 ntBASIC15.45■□□□□ 0.06
Scfd1Q8BRF7 Zranb2-201ENSMUST00000029831 2540 ntTSL 5 BASIC15.45■□□□□ 0.06
Scfd1Q8BRF7 Fbxo41-201ENSMUST00000159062 6505 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scfd1Q8BRF7 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Scfd1Q8BRF7 Dstyk-204ENSMUST00000188389 3232 ntTSL 5 BASIC15.45■□□□□ 0.06
Scfd1Q8BRF7 Zfp157-202ENSMUST00000100524 869 ntTSL 3 BASIC15.45■□□□□ 0.06
Scfd1Q8BRF7 Cox16-202ENSMUST00000110340 668 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Scfd1Q8BRF7 Mrpl2-203ENSMUST00000113430 991 ntAPPRIS ALT2 TSL 5 BASIC15.45■□□□□ 0.06
Scfd1Q8BRF7 Gm6447-201ENSMUST00000118905 835 ntBASIC15.45■□□□□ 0.06
Scfd1Q8BRF7 Rdh18-ps-201ENSMUST00000137395 944 ntBASIC15.45■□□□□ 0.06
Scfd1Q8BRF7 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC15.45■□□□□ 0.06
Scfd1Q8BRF7 Rdh18-ps-202ENSMUST00000143917 953 ntTSL 1 (best) BASIC15.45■□□□□ 0.06
Scfd1Q8BRF7 Mrps24-205ENSMUST00000154330 995 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scfd1Q8BRF7 Gm27682-201ENSMUST00000183930 110 ntBASIC15.45■□□□□ 0.06
Scfd1Q8BRF7 Gm5370-201ENSMUST00000187187 574 ntBASIC15.45■□□□□ 0.06
Scfd1Q8BRF7 Gm42693-201ENSMUST00000196779 631 ntBASIC15.45■□□□□ 0.06
Scfd1Q8BRF7 C030018K13Rik-202ENSMUST00000196829 712 ntTSL 3 BASIC15.45■□□□□ 0.06
Scfd1Q8BRF7 Myl6-205ENSMUST00000217969 608 ntTSL 2 BASIC15.45■□□□□ 0.06
Scfd1Q8BRF7 Cyct-201ENSMUST00000028430 655 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scfd1Q8BRF7 Cebpe-201ENSMUST00000064290 1241 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scfd1Q8BRF7 Cant1-201ENSMUST00000017620 4182 ntAPPRIS P1 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scfd1Q8BRF7 Phldb1-212ENSMUST00000138356 5600 ntTSL 5 BASIC15.45■□□□□ 0.06
Scfd1Q8BRF7 Rnase10-201ENSMUST00000022424 1629 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scfd1Q8BRF7 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC15.45■□□□□ 0.06
Scfd1Q8BRF7 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Scfd1Q8BRF7 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC15.45■□□□□ 0.06
Scfd1Q8BRF7 Tmem19-203ENSMUST00000217884 2799 ntTSL 5 BASIC15.45■□□□□ 0.06
Scfd1Q8BRF7 Tex13c2-201ENSMUST00000197237 1834 ntAPPRIS P1 BASIC15.45■□□□□ 0.06
Scfd1Q8BRF7 Nol4-208ENSMUST00000164893 2175 ntAPPRIS ALT1 TSL 5 BASIC15.45■□□□□ 0.06
Scfd1Q8BRF7 Zfp651-201ENSMUST00000093772 6353 ntAPPRIS P1 TSL 5 BASIC15.45■□□□□ 0.06
Scfd1Q8BRF7 Gm45684-201ENSMUST00000210244 1571 ntBASIC15.45■□□□□ 0.06
Scfd1Q8BRF7 Nt5c3b-203ENSMUST00000107397 1348 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Scfd1Q8BRF7 Gm28182-201ENSMUST00000188354 2477 ntBASIC15.44■□□□□ 0.06
Scfd1Q8BRF7 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Scfd1Q8BRF7 Psmc3-203ENSMUST00000111441 1419 ntTSL 5 BASIC15.44■□□□□ 0.06
Scfd1Q8BRF7 Gm7899-201ENSMUST00000192935 1897 ntBASIC15.44■□□□□ 0.06
Scfd1Q8BRF7 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC15.44■□□□□ 0.06
Scfd1Q8BRF7 Bcan-201ENSMUST00000090971 3141 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Scfd1Q8BRF7 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC15.44■□□□□ 0.06
Scfd1Q8BRF7 Lypla1-201ENSMUST00000027036 2507 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Scfd1Q8BRF7 Birc7-201ENSMUST00000108875 1178 ntAPPRIS P1 TSL 5 BASIC15.44■□□□□ 0.06
Scfd1Q8BRF7 Gm5187-201ENSMUST00000117317 991 ntBASIC15.44■□□□□ 0.06
Scfd1Q8BRF7 Cdk4-202ENSMUST00000120226 714 ntTSL 5 BASIC15.44■□□□□ 0.06
Scfd1Q8BRF7 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC15.44■□□□□ 0.06
Scfd1Q8BRF7 Gm5741-201ENSMUST00000177563 328 ntAPPRIS P1 TSL 1 (best) BASIC15.44■□□□□ 0.06
Scfd1Q8BRF7 Sox2ot-208ENSMUST00000197103 802 ntTSL 2 BASIC15.44■□□□□ 0.06
Scfd1Q8BRF7 Gm45233-201ENSMUST00000203633 898 ntAPPRIS P5 TSL 5 BASIC15.44■□□□□ 0.06
Retrieved 100 of 76,532 protein–RNA pairs in 52.5 ms