Protein–RNA interactions for Protein: Q8BGV9

Atg4d, Cysteine protease ATG4D, mousemouse

Predictions only

Length 474 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Atg4dQ8BGV9 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atg4dQ8BGV9 Med8-203ENSMUST00000084319 1134 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Atg4dQ8BGV9 Ecscr-201ENSMUST00000097618 1114 ntAPPRIS P2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atg4dQ8BGV9 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atg4dQ8BGV9 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atg4dQ8BGV9 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC12.65□□□□□ -0.38
Atg4dQ8BGV9 Zfp568-203ENSMUST00000148442 4005 ntAPPRIS P3 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atg4dQ8BGV9 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atg4dQ8BGV9 Dao-203ENSMUST00000161610 1633 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atg4dQ8BGV9 Rgs6-204ENSMUST00000185674 1362 ntTSL 5 BASIC12.65□□□□□ -0.38
Atg4dQ8BGV9 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atg4dQ8BGV9 Fstl5-201ENSMUST00000038364 5107 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atg4dQ8BGV9 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atg4dQ8BGV9 Myt1l-204ENSMUST00000218198 2735 ntTSL 1 (best) BASIC12.65□□□□□ -0.38
Atg4dQ8BGV9 Cenpl-202ENSMUST00000111618 1996 ntAPPRIS P1 TSL 5 BASIC12.65□□□□□ -0.38
Atg4dQ8BGV9 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC12.65□□□□□ -0.38
Atg4dQ8BGV9 Gm26747-201ENSMUST00000180597 1716 ntTSL 5 BASIC12.65□□□□□ -0.38
Atg4dQ8BGV9 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atg4dQ8BGV9 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atg4dQ8BGV9 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atg4dQ8BGV9 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atg4dQ8BGV9 Rapsn-202ENSMUST00000111445 1450 ntTSL 5 BASIC12.65□□□□□ -0.38
Atg4dQ8BGV9 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.38
Atg4dQ8BGV9 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Atg4dQ8BGV9 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Atg4dQ8BGV9 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.65□□□□□ -0.39
Atg4dQ8BGV9 Dot1l-201ENSMUST00000105336 6808 ntAPPRIS P1 TSL 1 (best) BASIC12.65□□□□□ -0.39
Atg4dQ8BGV9 Kif3c-205ENSMUST00000220210 4144 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atg4dQ8BGV9 B3galt4-201ENSMUST00000087543 1569 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Atg4dQ8BGV9 Mib2-201ENSMUST00000103176 3642 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atg4dQ8BGV9 Il1r1-202ENSMUST00000114795 4832 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atg4dQ8BGV9 Gm13387-202ENSMUST00000131147 2646 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Atg4dQ8BGV9 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atg4dQ8BGV9 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Atg4dQ8BGV9 Fhl2-202ENSMUST00000185893 1421 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atg4dQ8BGV9 4833439L19Rik-201ENSMUST00000026989 2727 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atg4dQ8BGV9 Mpi-201ENSMUST00000034856 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atg4dQ8BGV9 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atg4dQ8BGV9 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Atg4dQ8BGV9 Rusc1-202ENSMUST00000090929 3706 ntAPPRIS P4 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atg4dQ8BGV9 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC12.64□□□□□ -0.39
Atg4dQ8BGV9 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC12.64□□□□□ -0.39
Atg4dQ8BGV9 Gm11918-201ENSMUST00000121660 179 ntBASIC12.64□□□□□ -0.39
Atg4dQ8BGV9 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.64□□□□□ -0.39
Atg4dQ8BGV9 Ighv2-3-201ENSMUST00000178229 347 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Atg4dQ8BGV9 1700029B24Rik-201ENSMUST00000194040 497 ntBASIC12.64□□□□□ -0.39
Atg4dQ8BGV9 Gm4610-201ENSMUST00000198222 905 ntTSL 5 BASIC12.64□□□□□ -0.39
Atg4dQ8BGV9 Gm8463-201ENSMUST00000208573 613 ntBASIC12.64□□□□□ -0.39
Atg4dQ8BGV9 AC150560.1-201ENSMUST00000227731 1187 ntBASIC12.64□□□□□ -0.39
Atg4dQ8BGV9 Ndufa4l2-201ENSMUST00000035735 934 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atg4dQ8BGV9 Rn7sk-201ENSMUST00000083103 331 ntBASIC12.64□□□□□ -0.39
Atg4dQ8BGV9 Gm26315-201ENSMUST00000083890 321 ntBASIC12.64□□□□□ -0.39
Atg4dQ8BGV9 Adad1-203ENSMUST00000144629 3101 ntAPPRIS P2 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atg4dQ8BGV9 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC12.64□□□□□ -0.39
Atg4dQ8BGV9 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atg4dQ8BGV9 Dis3-201ENSMUST00000042471 5150 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Atg4dQ8BGV9 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC12.64□□□□□ -0.39
Atg4dQ8BGV9 Timp4-201ENSMUST00000032462 5496 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atg4dQ8BGV9 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.64□□□□□ -0.39
Atg4dQ8BGV9 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC12.64□□□□□ -0.39
Atg4dQ8BGV9 Phldb1-201ENSMUST00000034611 5461 ntTSL 1 (best) BASIC12.64□□□□□ -0.39
Atg4dQ8BGV9 Flt3-201ENSMUST00000049324 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.64□□□□□ -0.39
Atg4dQ8BGV9 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atg4dQ8BGV9 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC12.63□□□□□ -0.39
Atg4dQ8BGV9 Slc25a37-201ENSMUST00000037064 4174 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atg4dQ8BGV9 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atg4dQ8BGV9 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atg4dQ8BGV9 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atg4dQ8BGV9 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.63□□□□□ -0.39
Atg4dQ8BGV9 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atg4dQ8BGV9 Syt13-201ENSMUST00000028648 3761 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atg4dQ8BGV9 Gm11732-201ENSMUST00000151381 1742 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Atg4dQ8BGV9 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Atg4dQ8BGV9 E130317F20Rik-202ENSMUST00000217802 3420 ntBASIC12.63□□□□□ -0.39
Atg4dQ8BGV9 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.63□□□□□ -0.39
Atg4dQ8BGV9 Adamts8-201ENSMUST00000068135 3631 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atg4dQ8BGV9 Gm4782-201ENSMUST00000168705 2046 ntBASIC12.63□□□□□ -0.39
Atg4dQ8BGV9 Lca5-202ENSMUST00000034793 2001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atg4dQ8BGV9 Lzts3-203ENSMUST00000110260 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atg4dQ8BGV9 Sumo2-204ENSMUST00000118155 884 ntTSL 2 BASIC12.63□□□□□ -0.39
Atg4dQ8BGV9 Vps29-204ENSMUST00000118830 1014 ntAPPRIS ALT1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atg4dQ8BGV9 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC12.63□□□□□ -0.39
Atg4dQ8BGV9 Gm12138-201ENSMUST00000122180 951 ntBASIC12.63□□□□□ -0.39
Atg4dQ8BGV9 Gm15966-201ENSMUST00000136853 480 ntTSL 3 BASIC12.63□□□□□ -0.39
Atg4dQ8BGV9 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.63□□□□□ -0.39
Atg4dQ8BGV9 Gm34086-201ENSMUST00000196486 743 ntTSL 3 BASIC12.63□□□□□ -0.39
Atg4dQ8BGV9 Gm5276-201ENSMUST00000196683 1047 ntBASIC12.63□□□□□ -0.39
Atg4dQ8BGV9 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC12.63□□□□□ -0.39
Atg4dQ8BGV9 Gm44487-201ENSMUST00000205145 325 ntBASIC12.63□□□□□ -0.39
Atg4dQ8BGV9 Hddc3-208ENSMUST00000206122 696 ntTSL 3 BASIC12.63□□□□□ -0.39
Atg4dQ8BGV9 Ifitm3-201ENSMUST00000026565 678 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atg4dQ8BGV9 Emc4-201ENSMUST00000028551 983 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atg4dQ8BGV9 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atg4dQ8BGV9 Gm9755-201ENSMUST00000032981 1356 ntBASIC12.63□□□□□ -0.39
Atg4dQ8BGV9 Ptpn6-201ENSMUST00000004377 2308 ntAPPRIS ALT2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atg4dQ8BGV9 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC12.63□□□□□ -0.39
Atg4dQ8BGV9 Mcmbp-201ENSMUST00000057557 4237 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atg4dQ8BGV9 Gm18244-201ENSMUST00000219747 1566 ntBASIC12.63□□□□□ -0.39
Atg4dQ8BGV9 Mogat2-201ENSMUST00000064231 1780 ntAPPRIS P1 TSL 1 (best) BASIC12.63□□□□□ -0.39
Atg4dQ8BGV9 Kcnq2-217ENSMUST00000149964 8209 ntAPPRIS P2 TSL 1 (best) BASIC12.63□□□□□ -0.39
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms