Protein–RNA interactions for Protein: Q80X41

Vrk1, Serine/threonine-protein kinase VRK1, mousemouse

Predictions only

Length 440 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Vrk1Q80X41 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vrk1Q80X41 Dmkn-201ENSMUST00000041703 662 ntAPPRIS ALT2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vrk1Q80X41 Casc3-204ENSMUST00000169695 3741 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vrk1Q80X41 Nop58-201ENSMUST00000027174 1713 ntAPPRIS ALT2 TSL 5 BASIC12.98□□□□□ -0.33
Vrk1Q80X41 H13-202ENSMUST00000089059 1743 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vrk1Q80X41 Yap1-202ENSMUST00000086580 4115 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vrk1Q80X41 Pars2-201ENSMUST00000058905 2191 ntAPPRIS P3 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vrk1Q80X41 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vrk1Q80X41 Btbd10-201ENSMUST00000047091 2581 ntAPPRIS P2 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vrk1Q80X41 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vrk1Q80X41 Atp5f1-201ENSMUST00000118209 1604 ntAPPRIS P1 TSL 5 BASIC12.98□□□□□ -0.33
Vrk1Q80X41 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.98□□□□□ -0.33
Vrk1Q80X41 Pcyox1l-201ENSMUST00000025472 2017 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vrk1Q80X41 Shmt1-201ENSMUST00000018744 2858 ntAPPRIS P1 TSL 1 (best) BASIC12.98□□□□□ -0.33
Vrk1Q80X41 Gm26732-201ENSMUST00000181807 2771 ntTSL 5 BASIC12.98□□□□□ -0.33
Vrk1Q80X41 Gpr137b-202ENSMUST00000220628 3634 ntTSL 1 (best) BASIC12.98□□□□□ -0.33
Vrk1Q80X41 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vrk1Q80X41 Saraf-201ENSMUST00000033933 1860 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vrk1Q80X41 Tet3-203ENSMUST00000186548 5944 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vrk1Q80X41 Dera-207ENSMUST00000203693 1446 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vrk1Q80X41 Hsph1-211ENSMUST00000202361 3802 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vrk1Q80X41 Eef1e1-201ENSMUST00000001757 2553 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vrk1Q80X41 Gm14455-201ENSMUST00000138288 2146 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vrk1Q80X41 4933435G04Rik-201ENSMUST00000205892 2108 ntBASIC12.97□□□□□ -0.33
Vrk1Q80X41 Ap3d1-201ENSMUST00000020420 4805 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vrk1Q80X41 Ncln-202ENSMUST00000118498 2841 ntAPPRIS ALT1 TSL 5 BASIC12.97□□□□□ -0.33
Vrk1Q80X41 Cxadr-202ENSMUST00000114229 1668 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vrk1Q80X41 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vrk1Q80X41 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.97□□□□□ -0.33
Vrk1Q80X41 Glrx2-202ENSMUST00000111957 580 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vrk1Q80X41 Gm12384-201ENSMUST00000119228 919 ntBASIC12.97□□□□□ -0.33
Vrk1Q80X41 Gm22331-201ENSMUST00000158066 136 ntBASIC12.97□□□□□ -0.33
Vrk1Q80X41 Gas5-210ENSMUST00000159706 557 ntTSL 2 BASIC12.97□□□□□ -0.33
Vrk1Q80X41 Ppm1h-208ENSMUST00000162969 811 ntTSL 3 BASIC12.97□□□□□ -0.33
Vrk1Q80X41 1600017P15Rik-202ENSMUST00000193960 890 ntBASIC12.97□□□□□ -0.33
Vrk1Q80X41 Gm43818-201ENSMUST00000200605 466 ntBASIC12.97□□□□□ -0.33
Vrk1Q80X41 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vrk1Q80X41 Mrps22-201ENSMUST00000035034 1197 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vrk1Q80X41 Ppil3-201ENSMUST00000081677 896 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vrk1Q80X41 Cadps2-209ENSMUST00000142913 4533 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Vrk1Q80X41 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vrk1Q80X41 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vrk1Q80X41 Odf2-203ENSMUST00000113755 2305 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vrk1Q80X41 Igsf5-202ENSMUST00000081093 1554 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vrk1Q80X41 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC12.97□□□□□ -0.33
Vrk1Q80X41 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vrk1Q80X41 Ctsk-201ENSMUST00000015664 1512 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vrk1Q80X41 4933436I20Rik-202ENSMUST00000190615 1509 ntTSL 5 BASIC12.97□□□□□ -0.33
Vrk1Q80X41 Rtfdc1-201ENSMUST00000029005 2173 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vrk1Q80X41 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vrk1Q80X41 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.97□□□□□ -0.33
Vrk1Q80X41 Pcnx3-201ENSMUST00000068169 5276 ntTSL 1 (best) BASIC12.97□□□□□ -0.33
Vrk1Q80X41 2810402E24Rik-201ENSMUST00000190699 3040 ntBASIC12.97□□□□□ -0.33
Vrk1Q80X41 Lysmd3-202ENSMUST00000224300 4250 ntAPPRIS P1 BASIC12.96□□□□□ -0.33
Vrk1Q80X41 Nr2e3-201ENSMUST00000034831 2037 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vrk1Q80X41 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC12.96□□□□□ -0.33
Vrk1Q80X41 Rab11fip2-201ENSMUST00000051996 4482 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vrk1Q80X41 F10-204ENSMUST00000128418 1395 ntTSL 5 BASIC12.96□□□□□ -0.33
Vrk1Q80X41 Gemin5-205ENSMUST00000172035 6213 ntAPPRIS ALT2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vrk1Q80X41 Gm37691-201ENSMUST00000192147 2573 ntBASIC12.96□□□□□ -0.33
Vrk1Q80X41 Gm20465-201ENSMUST00000174768 1932 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vrk1Q80X41 Hnrnpa2b1-204ENSMUST00000203220 1638 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vrk1Q80X41 Ankrd34b-203ENSMUST00000168871 3397 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vrk1Q80X41 Kcp-201ENSMUST00000078112 4775 ntTSL 5 BASIC12.96□□□□□ -0.33
Vrk1Q80X41 Il2rb-202ENSMUST00000163494 1894 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vrk1Q80X41 Mfsd1-201ENSMUST00000029344 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vrk1Q80X41 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vrk1Q80X41 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vrk1Q80X41 Folr1-205ENSMUST00000106986 1286 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vrk1Q80X41 Apoo-204ENSMUST00000113898 784 ntAPPRIS P1 TSL 3 BASIC12.96□□□□□ -0.33
Vrk1Q80X41 Gm11803-201ENSMUST00000119966 444 ntBASIC12.96□□□□□ -0.33
Vrk1Q80X41 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC12.96□□□□□ -0.33
Vrk1Q80X41 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC12.96□□□□□ -0.33
Vrk1Q80X41 Tbx3os1-203ENSMUST00000140101 490 ntTSL 3 BASIC12.96□□□□□ -0.33
Vrk1Q80X41 Gm6152-201ENSMUST00000151704 340 ntBASIC12.96□□□□□ -0.33
Vrk1Q80X41 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.96□□□□□ -0.33
Vrk1Q80X41 Naa60-209ENSMUST00000175809 279 ntTSL 5 BASIC12.96□□□□□ -0.33
Vrk1Q80X41 1700037C18Rik-205ENSMUST00000177323 915 ntAPPRIS ALT2 TSL 5 BASIC12.96□□□□□ -0.33
Vrk1Q80X41 Gm8565-201ENSMUST00000183259 1014 ntBASIC12.96□□□□□ -0.33
Vrk1Q80X41 Dera-204ENSMUST00000203216 688 ntTSL 5 BASIC12.96□□□□□ -0.33
Vrk1Q80X41 Oit1-201ENSMUST00000022269 1253 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vrk1Q80X41 Mal-201ENSMUST00000028853 486 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vrk1Q80X41 Cox7a2-201ENSMUST00000034881 659 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vrk1Q80X41 Pias3-203ENSMUST00000107077 2695 ntTSL 1 (best) BASIC12.96□□□□□ -0.33
Vrk1Q80X41 Zfp664-201ENSMUST00000111417 4092 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vrk1Q80X41 Commd7-201ENSMUST00000071852 3210 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vrk1Q80X41 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vrk1Q80X41 Canx-205ENSMUST00000179865 4281 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.33
Vrk1Q80X41 Pex2-202ENSMUST00000071280 1777 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vrk1Q80X41 Mon1a-202ENSMUST00000191906 2821 ntTSL 2 BASIC12.96□□□□□ -0.34
Vrk1Q80X41 Itgb3-201ENSMUST00000021028 5784 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vrk1Q80X41 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Vrk1Q80X41 Tsn-201ENSMUST00000027623 7063 ntAPPRIS P1 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vrk1Q80X41 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC12.96□□□□□ -0.34
Vrk1Q80X41 AW822073-202ENSMUST00000204003 1959 ntAPPRIS P1 BASIC12.96□□□□□ -0.34
Vrk1Q80X41 Plch2-207ENSMUST00000139976 5322 ntAPPRIS P3 TSL 1 (best) BASIC12.96□□□□□ -0.34
Vrk1Q80X41 Gm7553-201ENSMUST00000185805 1426 ntBASIC12.96□□□□□ -0.34
Vrk1Q80X41 BC051537-201ENSMUST00000183290 1668 ntTSL 1 (best) BASIC12.96□□□□□ -0.34
Vrk1Q80X41 Tspan32-206ENSMUST00000105925 1376 ntTSL 1 (best) BASIC12.95□□□□□ -0.34
Vrk1Q80X41 Hpcal4-202ENSMUST00000106246 1627 ntAPPRIS P1 TSL 5 BASIC12.95□□□□□ -0.34
Retrieved 100 of 76,532 protein–RNA pairs in 25.7 ms