Protein–RNA interactions for Protein: Q80SX8

Pif1, ATP-dependent DNA helicase PIF1, mousemouse

Predictions only

Length 650 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pif1Q80SX8 Pla2g5-201ENSMUST00000030524 2131 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pif1Q80SX8 4921530L21Rik-201ENSMUST00000045892 1161 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pif1Q80SX8 Nphp4-202ENSMUST00000081393 5027 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pif1Q80SX8 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pif1Q80SX8 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pif1Q80SX8 Prss36-201ENSMUST00000094026 3061 ntAPPRIS ALT2 TSL 5 BASIC12.57□□□□□ -0.4
Pif1Q80SX8 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pif1Q80SX8 Mlkl-201ENSMUST00000056157 2003 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pif1Q80SX8 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pif1Q80SX8 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC12.57□□□□□ -0.4
Pif1Q80SX8 Wnt11-201ENSMUST00000067495 3451 ntAPPRIS P1 TSL 5 BASIC12.57□□□□□ -0.4
Pif1Q80SX8 Slc22a20-201ENSMUST00000041827 1897 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pif1Q80SX8 Ube3a-201ENSMUST00000107537 4911 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pif1Q80SX8 Tifa-203ENSMUST00000164447 1538 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pif1Q80SX8 Dao-202ENSMUST00000112292 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pif1Q80SX8 Dimt1-201ENSMUST00000022203 2051 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pif1Q80SX8 Fgfr1op-202ENSMUST00000097419 3505 ntAPPRIS ALT2 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pif1Q80SX8 Gm32036-201ENSMUST00000221484 2638 ntTSL 2 BASIC12.57□□□□□ -0.4
Pif1Q80SX8 Sh2b2-201ENSMUST00000005188 2848 ntAPPRIS P1 TSL 1 (best) BASIC12.57□□□□□ -0.4
Pif1Q80SX8 Creld2-201ENSMUST00000024042 1364 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pif1Q80SX8 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pif1Q80SX8 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pif1Q80SX8 Ism2-202ENSMUST00000125733 2526 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Pif1Q80SX8 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.56□□□□□ -0.4
Pif1Q80SX8 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Pif1Q80SX8 Atpaf2-201ENSMUST00000108721 1813 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pif1Q80SX8 Rhox9-202ENSMUST00000170643 2422 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pif1Q80SX8 Mir698-201ENSMUST00000102164 109 ntBASIC12.56□□□□□ -0.4
Pif1Q80SX8 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.56□□□□□ -0.4
Pif1Q80SX8 Nfu1-203ENSMUST00000120240 1195 ntAPPRIS P3 TSL 5 BASIC12.56□□□□□ -0.4
Pif1Q80SX8 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC12.56□□□□□ -0.4
Pif1Q80SX8 Far2os1-201ENSMUST00000162391 555 ntTSL 2 BASIC12.56□□□□□ -0.4
Pif1Q80SX8 Klk11-202ENSMUST00000171458 1260 ntAPPRIS P3 TSL 2 BASIC12.56□□□□□ -0.4
Pif1Q80SX8 Pyy-204ENSMUST00000177304 551 ntAPPRIS ALT2 TSL 2 BASIC12.56□□□□□ -0.4
Pif1Q80SX8 Gm36991-201ENSMUST00000191800 648 ntBASIC12.56□□□□□ -0.4
Pif1Q80SX8 Gm29741-201ENSMUST00000192667 421 ntBASIC12.56□□□□□ -0.4
Pif1Q80SX8 Gm44974-201ENSMUST00000206387 1279 ntBASIC12.56□□□□□ -0.4
Pif1Q80SX8 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pif1Q80SX8 Sit1-201ENSMUST00000030180 1228 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pif1Q80SX8 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC12.56□□□□□ -0.4
Pif1Q80SX8 Cbs-201ENSMUST00000067801 2497 ntAPPRIS P4 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pif1Q80SX8 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC12.56□□□□□ -0.4
Pif1Q80SX8 Kctd3-201ENSMUST00000085678 3706 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pif1Q80SX8 Gm13050-201ENSMUST00000122149 1345 ntBASIC12.56□□□□□ -0.4
Pif1Q80SX8 Slc39a3-202ENSMUST00000117276 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pif1Q80SX8 Pde4d-203ENSMUST00000117420 1955 ntTSL 1 (best) BASIC12.56□□□□□ -0.4
Pif1Q80SX8 Gm43205-201ENSMUST00000198622 1968 ntBASIC12.56□□□□□ -0.4
Pif1Q80SX8 Fbxo28-201ENSMUST00000051431 4925 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pif1Q80SX8 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.56□□□□□ -0.4
Pif1Q80SX8 Cnot7-201ENSMUST00000034012 2615 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pif1Q80SX8 Psmb9-204ENSMUST00000174576 1351 ntAPPRIS P1 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pif1Q80SX8 Prkcsh-205ENSMUST00000216344 2228 ntAPPRIS P3 TSL 1 (best) BASIC12.56□□□□□ -0.4
Pif1Q80SX8 Nup62-205ENSMUST00000208626 2708 ntAPPRIS P1 TSL 5 BASIC12.55□□□□□ -0.4
Pif1Q80SX8 Nup62-201ENSMUST00000057195 2722 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pif1Q80SX8 Epsti1-201ENSMUST00000022591 1870 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pif1Q80SX8 Slc8a3-203ENSMUST00000182208 3433 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pif1Q80SX8 Kcnq1-201ENSMUST00000009689 3029 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pif1Q80SX8 Cpeb3-210ENSMUST00000136286 5260 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Pif1Q80SX8 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pif1Q80SX8 Haus8-202ENSMUST00000110071 1452 ntAPPRIS P3 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pif1Q80SX8 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pif1Q80SX8 Hyou1-201ENSMUST00000066601 4432 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pif1Q80SX8 Camk2b-209ENSMUST00000109813 4023 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pif1Q80SX8 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pif1Q80SX8 Camk2b-204ENSMUST00000090443 4004 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pif1Q80SX8 Aurkaip1-202ENSMUST00000105591 773 ntAPPRIS P1 TSL 3 BASIC12.55□□□□□ -0.4
Pif1Q80SX8 Fuom-203ENSMUST00000121115 872 ntTSL 1 (best) BASIC12.55□□□□□ -0.4
Pif1Q80SX8 Gm24644-201ENSMUST00000157114 139 ntBASIC12.55□□□□□ -0.4
Pif1Q80SX8 Dpy30-202ENSMUST00000164832 799 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pif1Q80SX8 Bik-201ENSMUST00000016902 943 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pif1Q80SX8 Gm20652-201ENSMUST00000177314 383 ntTSL 2 BASIC12.55□□□□□ -0.4
Pif1Q80SX8 Fkbp2-202ENSMUST00000177752 627 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pif1Q80SX8 4930502C17Rik-201ENSMUST00000200282 948 ntBASIC12.55□□□□□ -0.4
Pif1Q80SX8 Gm42550-201ENSMUST00000201553 960 ntBASIC12.55□□□□□ -0.4
Pif1Q80SX8 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.55□□□□□ -0.4
Pif1Q80SX8 Gm40466-201ENSMUST00000212174 422 ntBASIC12.55□□□□□ -0.4
Pif1Q80SX8 AC159896.2-201ENSMUST00000214753 269 ntBASIC12.55□□□□□ -0.4
Pif1Q80SX8 9230020A06Rik-204ENSMUST00000215201 1116 ntTSL 5 BASIC12.55□□□□□ -0.4
Pif1Q80SX8 AC154319.1-201ENSMUST00000216330 312 ntBASIC12.55□□□□□ -0.4
Pif1Q80SX8 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC12.55□□□□□ -0.4
Pif1Q80SX8 AL589735.1-201ENSMUST00000224353 270 ntBASIC12.55□□□□□ -0.4
Pif1Q80SX8 CT030704.2-201ENSMUST00000228887 494 ntBASIC12.55□□□□□ -0.4
Pif1Q80SX8 Dctn6-201ENSMUST00000033913 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pif1Q80SX8 Rassf8-202ENSMUST00000058538 1131 ntBASIC12.55□□□□□ -0.4
Pif1Q80SX8 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pif1Q80SX8 Tnks1bp1-202ENSMUST00000111605 5747 ntAPPRIS P2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pif1Q80SX8 Gm19863-201ENSMUST00000192480 2218 ntBASIC12.55□□□□□ -0.4
Pif1Q80SX8 AC164702.1-201ENSMUST00000220135 2212 ntBASIC12.55□□□□□ -0.4
Pif1Q80SX8 Ckmt1-202ENSMUST00000078222 1518 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pif1Q80SX8 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pif1Q80SX8 Fars2-208ENSMUST00000224611 1750 ntAPPRIS P1 BASIC12.55□□□□□ -0.4
Pif1Q80SX8 Tmem184a-201ENSMUST00000044002 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pif1Q80SX8 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Pif1Q80SX8 Tmem86b-202ENSMUST00000205360 1344 ntTSL 2 BASIC12.55□□□□□ -0.4
Pif1Q80SX8 Lancl1-202ENSMUST00000113979 4461 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pif1Q80SX8 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pif1Q80SX8 Alox5-201ENSMUST00000026795 2821 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pif1Q80SX8 Slc8b1-203ENSMUST00000111889 1624 ntAPPRIS ALT2 TSL 5 BASIC12.55□□□□□ -0.4
Pif1Q80SX8 Cfp-201ENSMUST00000001156 1636 ntAPPRIS P1 TSL 1 (best) BASIC12.55□□□□□ -0.4
Pif1Q80SX8 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.55□□□□□ -0.4
Retrieved 100 of 76,532 protein–RNA pairs in 40.3 ms