Protein–RNA interactions for Protein: Q7TSG2

Ctdp1, RNA polymerase II subunit A C-terminal domain phosphatase, mousemouse

Predictions only

Length 960 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ctdp1Q7TSG2 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ctdp1Q7TSG2 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC14.84□□□□□ -0.03
Ctdp1Q7TSG2 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC14.84□□□□□ -0.03
Ctdp1Q7TSG2 Pik3ip1-201ENSMUST00000045153 2573 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ctdp1Q7TSG2 Rab10os-202ENSMUST00000177896 2872 ntTSL 1 (best) BASIC14.83□□□□□ -0.03
Ctdp1Q7TSG2 Rcsd1-201ENSMUST00000040357 2622 ntAPPRIS P4 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ctdp1Q7TSG2 Gdf6-201ENSMUST00000057613 3532 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ctdp1Q7TSG2 Sp2-201ENSMUST00000062652 2367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.03
Ctdp1Q7TSG2 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.03
Ctdp1Q7TSG2 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ctdp1Q7TSG2 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ctdp1Q7TSG2 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ctdp1Q7TSG2 Crybg2-213ENSMUST00000227683 5578 ntAPPRIS ALT2 BASIC14.83□□□□□ -0.04
Ctdp1Q7TSG2 Prdm5-202ENSMUST00000031976 2155 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ctdp1Q7TSG2 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ctdp1Q7TSG2 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ctdp1Q7TSG2 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ctdp1Q7TSG2 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.83□□□□□ -0.04
Ctdp1Q7TSG2 Pex12-207ENSMUST00000176518 2501 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ctdp1Q7TSG2 Gm13616-201ENSMUST00000120600 222 ntBASIC14.83□□□□□ -0.04
Ctdp1Q7TSG2 Gm9824-201ENSMUST00000178707 561 ntBASIC14.83□□□□□ -0.04
Ctdp1Q7TSG2 Gm27430-201ENSMUST00000184585 107 ntBASIC14.83□□□□□ -0.04
Ctdp1Q7TSG2 1700086L19Rik-202ENSMUST00000185822 1028 ntTSL 3 BASIC14.83□□□□□ -0.04
Ctdp1Q7TSG2 Gm44333-201ENSMUST00000197168 107 ntBASIC14.83□□□□□ -0.04
Ctdp1Q7TSG2 Plpp4-203ENSMUST00000205896 714 ntTSL 5 BASIC14.83□□□□□ -0.04
Ctdp1Q7TSG2 2610318N02Rik-201ENSMUST00000093336 1265 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ctdp1Q7TSG2 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ctdp1Q7TSG2 Phf13-201ENSMUST00000055688 3205 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ctdp1Q7TSG2 Dyx1c1-202ENSMUST00000098567 1612 ntAPPRIS ALT2 TSL 5 BASIC14.83□□□□□ -0.04
Ctdp1Q7TSG2 Fgf17-202ENSMUST00000227123 1336 ntBASIC14.83□□□□□ -0.04
Ctdp1Q7TSG2 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ctdp1Q7TSG2 Cluh-201ENSMUST00000092915 5379 ntAPPRIS P2 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ctdp1Q7TSG2 Epha8-201ENSMUST00000030420 4713 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ctdp1Q7TSG2 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ctdp1Q7TSG2 Kcnj3-201ENSMUST00000067101 5215 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ctdp1Q7TSG2 Gm45242-201ENSMUST00000210666 2129 ntBASIC14.83□□□□□ -0.04
Ctdp1Q7TSG2 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ctdp1Q7TSG2 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC14.83□□□□□ -0.04
Ctdp1Q7TSG2 Opn4-201ENSMUST00000022331 2156 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ctdp1Q7TSG2 Nr2c2-201ENSMUST00000113460 7647 ntAPPRIS P3 TSL 1 (best) BASIC14.83□□□□□ -0.04
Ctdp1Q7TSG2 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ctdp1Q7TSG2 Zfp36l1-201ENSMUST00000021552 2990 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ctdp1Q7TSG2 Prss36-202ENSMUST00000118755 3028 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Ctdp1Q7TSG2 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ctdp1Q7TSG2 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ctdp1Q7TSG2 Nrxn1-207ENSMUST00000160844 9309 ntAPPRIS P2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ctdp1Q7TSG2 Dnajc22-201ENSMUST00000061295 1564 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ctdp1Q7TSG2 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ctdp1Q7TSG2 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC14.82□□□□□ -0.04
Ctdp1Q7TSG2 Slc9a3r2-202ENSMUST00000019684 1688 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ctdp1Q7TSG2 Mdga1-201ENSMUST00000073556 7566 ntAPPRIS P2 TSL 5 BASIC14.82□□□□□ -0.04
Ctdp1Q7TSG2 Mvk-206ENSMUST00000137167 1049 ntTSL 2 BASIC14.82□□□□□ -0.04
Ctdp1Q7TSG2 Sgsm3-208ENSMUST00000139517 2996 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ctdp1Q7TSG2 1700003M07Rik-202ENSMUST00000147634 564 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ctdp1Q7TSG2 Ighv8-14-201ENSMUST00000196781 358 ntBASIC14.82□□□□□ -0.04
Ctdp1Q7TSG2 AC139350.3-201ENSMUST00000226151 420 ntBASIC14.82□□□□□ -0.04
Ctdp1Q7TSG2 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ctdp1Q7TSG2 Slc22a2-201ENSMUST00000046959 2115 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ctdp1Q7TSG2 Tmod4-201ENSMUST00000005769 1242 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ctdp1Q7TSG2 Ccdc172-201ENSMUST00000069419 1086 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ctdp1Q7TSG2 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC14.82□□□□□ -0.04
Ctdp1Q7TSG2 Zkscan14-203ENSMUST00000198959 2243 ntBASIC14.82□□□□□ -0.04
Ctdp1Q7TSG2 Rps6ka4-202ENSMUST00000170516 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ctdp1Q7TSG2 Rps6ka4-201ENSMUST00000025903 3105 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ctdp1Q7TSG2 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ctdp1Q7TSG2 Has3-203ENSMUST00000176144 4150 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ctdp1Q7TSG2 Bend7-201ENSMUST00000056914 2302 ntAPPRIS P3 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ctdp1Q7TSG2 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC14.82□□□□□ -0.04
Ctdp1Q7TSG2 Hmgcl-201ENSMUST00000030432 1418 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ctdp1Q7TSG2 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ctdp1Q7TSG2 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC14.82□□□□□ -0.04
Ctdp1Q7TSG2 Serpina11-202ENSMUST00000120251 1461 ntAPPRIS ALT2 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ctdp1Q7TSG2 Ntrk2-204ENSMUST00000224259 3049 ntBASIC14.82□□□□□ -0.04
Ctdp1Q7TSG2 Oxa1l-201ENSMUST00000000985 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.82□□□□□ -0.04
Ctdp1Q7TSG2 Lrriq4-201ENSMUST00000108265 2092 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ctdp1Q7TSG2 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC14.81□□□□□ -0.04
Ctdp1Q7TSG2 Nrf1-210ENSMUST00000115211 3295 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ctdp1Q7TSG2 Adgrl1-204ENSMUST00000131717 5152 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ctdp1Q7TSG2 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ctdp1Q7TSG2 Hacd2-201ENSMUST00000061156 3603 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ctdp1Q7TSG2 Sh2b1-206ENSMUST00000205889 3011 ntAPPRIS ALT2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ctdp1Q7TSG2 Tnnc2-201ENSMUST00000103095 700 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ctdp1Q7TSG2 Ppil3-203ENSMUST00000114348 1033 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ctdp1Q7TSG2 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ctdp1Q7TSG2 Arpp19-210ENSMUST00000170308 429 ntAPPRIS P1 TSL 2 BASIC14.81□□□□□ -0.04
Ctdp1Q7TSG2 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ctdp1Q7TSG2 Cyb561d2-205ENSMUST00000195235 1162 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ctdp1Q7TSG2 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.81□□□□□ -0.04
Ctdp1Q7TSG2 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ctdp1Q7TSG2 A130006I12Rik-201ENSMUST00000091396 408 ntBASIC14.81□□□□□ -0.04
Ctdp1Q7TSG2 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC14.81□□□□□ -0.04
Ctdp1Q7TSG2 AC154725.1-201ENSMUST00000224826 1961 ntBASIC14.81□□□□□ -0.04
Ctdp1Q7TSG2 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ctdp1Q7TSG2 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ctdp1Q7TSG2 Tmc6-201ENSMUST00000026659 2865 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ctdp1Q7TSG2 Gm7002-201ENSMUST00000221386 2165 ntBASIC14.81□□□□□ -0.04
Ctdp1Q7TSG2 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ctdp1Q7TSG2 Oprm1-215ENSMUST00000105607 2369 ntAPPRIS P2 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ctdp1Q7TSG2 Strip1-201ENSMUST00000064759 3215 ntAPPRIS P1 TSL 1 (best) BASIC14.81□□□□□ -0.04
Ctdp1Q7TSG2 Gm10305-201ENSMUST00000195331 2475 ntBASIC14.81□□□□□ -0.04
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms