Protein–RNA interactions for Protein: Q7TMV1

Rnf139, E3 ubiquitin-protein ligase RNF139, mousemouse

Predictions only

Length 668 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf139Q7TMV1 Nek7-202ENSMUST00000186017 5258 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf139Q7TMV1 Inpp4a-209ENSMUST00000140264 3676 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf139Q7TMV1 Hoxd3-202ENSMUST00000111982 2413 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf139Q7TMV1 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC14.53□□□□□ -0.08
Rnf139Q7TMV1 Dagla-201ENSMUST00000039327 5634 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Rnf139Q7TMV1 Eif4g1-203ENSMUST00000115457 5440 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Rnf139Q7TMV1 Ccdc106-201ENSMUST00000045543 1534 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf139Q7TMV1 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf139Q7TMV1 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf139Q7TMV1 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf139Q7TMV1 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf139Q7TMV1 Gm13134-202ENSMUST00000144347 387 ntTSL 2 BASIC14.53□□□□□ -0.08
Rnf139Q7TMV1 Gm16000-201ENSMUST00000146657 447 ntTSL 2 BASIC14.53□□□□□ -0.08
Rnf139Q7TMV1 Gm21887-201ENSMUST00000178789 441 ntAPPRIS ALT2 TSL 5 BASIC14.53□□□□□ -0.08
Rnf139Q7TMV1 Mir7654-201ENSMUST00000185082 70 ntBASIC14.53□□□□□ -0.08
Rnf139Q7TMV1 Gm18307-201ENSMUST00000206864 949 ntBASIC14.53□□□□□ -0.08
Rnf139Q7TMV1 Pomc-202ENSMUST00000218089 977 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf139Q7TMV1 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.53□□□□□ -0.08
Rnf139Q7TMV1 Fam160a2-204ENSMUST00000122327 3521 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf139Q7TMV1 Zfp553-202ENSMUST00000106312 3342 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf139Q7TMV1 Ap2a1-202ENSMUST00000107857 3301 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf139Q7TMV1 Nfasc-208ENSMUST00000188307 3049 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf139Q7TMV1 Plxna1-202ENSMUST00000163139 9034 ntAPPRIS P1 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf139Q7TMV1 Pax6-201ENSMUST00000090391 2869 ntAPPRIS P3 TSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf139Q7TMV1 Matn2-206ENSMUST00000228570 2798 ntBASIC14.53□□□□□ -0.08
Rnf139Q7TMV1 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Rnf139Q7TMV1 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf139Q7TMV1 Stpg2-202ENSMUST00000106239 2055 ntAPPRIS P1 TSL 5 BASIC14.53□□□□□ -0.08
Rnf139Q7TMV1 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.53□□□□□ -0.08
Rnf139Q7TMV1 Zbtb5-201ENSMUST00000055028 4316 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf139Q7TMV1 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf139Q7TMV1 Etfrf1-205ENSMUST00000111724 1618 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf139Q7TMV1 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf139Q7TMV1 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.08
Rnf139Q7TMV1 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf139Q7TMV1 Trim45-203ENSMUST00000106980 3337 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf139Q7TMV1 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf139Q7TMV1 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf139Q7TMV1 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf139Q7TMV1 Nek6-203ENSMUST00000112902 3147 ntTSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf139Q7TMV1 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf139Q7TMV1 Rcan1-201ENSMUST00000023672 2192 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.08
Rnf139Q7TMV1 Pigg-202ENSMUST00000118910 3030 ntTSL 5 BASIC14.52□□□□□ -0.08
Rnf139Q7TMV1 Tagln2-201ENSMUST00000111228 716 ntAPPRIS P1 TSL 3 BASIC14.52□□□□□ -0.09
Rnf139Q7TMV1 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC14.52□□□□□ -0.09
Rnf139Q7TMV1 Gm13185-201ENSMUST00000131044 944 ntTSL 3 BASIC14.52□□□□□ -0.09
Rnf139Q7TMV1 Rab10os-207ENSMUST00000179924 823 ntTSL 5 BASIC14.52□□□□□ -0.09
Rnf139Q7TMV1 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC14.52□□□□□ -0.09
Rnf139Q7TMV1 Zfp787-205ENSMUST00000207957 880 ntTSL 5 BASIC14.52□□□□□ -0.09
Rnf139Q7TMV1 Tex12-202ENSMUST00000217236 1003 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf139Q7TMV1 AC154595.3-201ENSMUST00000224579 384 ntBASIC14.52□□□□□ -0.09
Rnf139Q7TMV1 Arl3-201ENSMUST00000026009 822 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf139Q7TMV1 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf139Q7TMV1 Hjurp-206ENSMUST00000147393 2030 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf139Q7TMV1 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf139Q7TMV1 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf139Q7TMV1 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf139Q7TMV1 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.52□□□□□ -0.09
Rnf139Q7TMV1 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf139Q7TMV1 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf139Q7TMV1 Eif4e3-201ENSMUST00000032151 2515 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf139Q7TMV1 Gad1-205ENSMUST00000130998 1705 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf139Q7TMV1 Trim52-201ENSMUST00000022708 3075 ntAPPRIS P1 BASIC14.52□□□□□ -0.09
Rnf139Q7TMV1 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf139Q7TMV1 Gpr19-208ENSMUST00000165392 1643 ntTSL 3 BASIC14.52□□□□□ -0.09
Rnf139Q7TMV1 Gpr19-202ENSMUST00000066107 1647 ntTSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf139Q7TMV1 Tead1-201ENSMUST00000059768 9964 ntAPPRIS P4 TSL 1 (best) BASIC14.52□□□□□ -0.09
Rnf139Q7TMV1 Kcnq1-202ENSMUST00000185383 1535 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf139Q7TMV1 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.51□□□□□ -0.09
Rnf139Q7TMV1 Gm43156-201ENSMUST00000202338 2127 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf139Q7TMV1 Tacc3-201ENSMUST00000074849 2669 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf139Q7TMV1 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf139Q7TMV1 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC14.51□□□□□ -0.09
Rnf139Q7TMV1 Lypd1-202ENSMUST00000159417 6464 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf139Q7TMV1 Igha-202ENSMUST00000194738 2540 ntAPPRIS P5 BASIC14.51□□□□□ -0.09
Rnf139Q7TMV1 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf139Q7TMV1 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf139Q7TMV1 Pde7b-206ENSMUST00000170265 1380 ntAPPRIS ALT2 TSL 5 BASIC14.51□□□□□ -0.09
Rnf139Q7TMV1 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC14.51□□□□□ -0.09
Rnf139Q7TMV1 Agpat4-201ENSMUST00000024594 1915 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf139Q7TMV1 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf139Q7TMV1 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf139Q7TMV1 Rbm33-201ENSMUST00000030920 3955 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf139Q7TMV1 Gm13689-201ENSMUST00000119360 685 ntBASIC14.51□□□□□ -0.09
Rnf139Q7TMV1 Zfp414-204ENSMUST00000166627 1211 ntAPPRIS ALT2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf139Q7TMV1 Gm29608-201ENSMUST00000190444 463 ntBASIC14.51□□□□□ -0.09
Rnf139Q7TMV1 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC14.51□□□□□ -0.09
Rnf139Q7TMV1 Cartpt-201ENSMUST00000022150 827 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf139Q7TMV1 AC159619.3-201ENSMUST00000222694 473 ntTSL 5 BASIC14.51□□□□□ -0.09
Rnf139Q7TMV1 Cartpt-202ENSMUST00000224142 1238 ntAPPRIS P1 BASIC14.51□□□□□ -0.09
Rnf139Q7TMV1 Zfp414-201ENSMUST00000073570 1197 ntAPPRIS P2 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf139Q7TMV1 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf139Q7TMV1 Tmem8b-202ENSMUST00000107865 4775 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf139Q7TMV1 Neil1-203ENSMUST00000190245 1693 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf139Q7TMV1 Pde4dip-201ENSMUST00000045243 6185 ntAPPRIS P3 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf139Q7TMV1 Emb-201ENSMUST00000022242 2923 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf139Q7TMV1 Ero1lb-202ENSMUST00000220811 3341 ntTSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf139Q7TMV1 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf139Q7TMV1 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Rnf139Q7TMV1 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC14.51□□□□□ -0.09
Retrieved 100 of 76,532 protein–RNA pairs in 78.5 ms