Protein–RNA interactions for Protein: Q62158

Trim27, Zinc finger protein RFP, mousemouse

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim27Q62158 Fam217a-204ENSMUST00000225242 1811 ntAPPRIS ALT2 BASIC16.68■□□□□ 0.26
Trim27Q62158 Fam53b-203ENSMUST00000097999 5465 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim27Q62158 Phactr2-203ENSMUST00000105545 8556 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim27Q62158 Fam131b-202ENSMUST00000095974 3992 ntAPPRIS ALT1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim27Q62158 Olfr718-ps1-203ENSMUST00000215102 4913 ntAPPRIS P5 TSL 5 BASIC16.68■□□□□ 0.26
Trim27Q62158 Ash2l-204ENSMUST00000110610 2337 ntAPPRIS ALT2 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim27Q62158 A530013C23Rik-201ENSMUST00000130679 2555 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim27Q62158 Erlin1-206ENSMUST00000170801 3172 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim27Q62158 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim27Q62158 Gh-201ENSMUST00000103071 862 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim27Q62158 Rpl9-203ENSMUST00000120094 680 ntAPPRIS P1 TSL 2 BASIC16.68■□□□□ 0.26
Trim27Q62158 Gm25925-201ENSMUST00000158314 306 ntBASIC16.68■□□□□ 0.26
Trim27Q62158 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC16.68■□□□□ 0.26
Trim27Q62158 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim27Q62158 Tspan11-201ENSMUST00000032501 5188 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim27Q62158 Pfkl-201ENSMUST00000020522 3730 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim27Q62158 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim27Q62158 Fbxw9-201ENSMUST00000095220 1907 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim27Q62158 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC16.68■□□□□ 0.26
Trim27Q62158 Ccdc125-201ENSMUST00000057325 2413 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim27Q62158 Ppcdc-209ENSMUST00000214624 1814 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim27Q62158 Lin54-201ENSMUST00000046154 4451 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim27Q62158 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Trim27Q62158 Hoxaas3-202ENSMUST00000136806 2207 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Trim27Q62158 Fscn2-201ENSMUST00000026445 1713 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim27Q62158 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim27Q62158 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim27Q62158 Ccne2-201ENSMUST00000029866 3006 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim27Q62158 Runx2-202ENSMUST00000113571 5898 ntAPPRIS P3 TSL 5 BASIC16.67■□□□□ 0.26
Trim27Q62158 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim27Q62158 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim27Q62158 Adra1b-201ENSMUST00000067258 3331 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim27Q62158 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim27Q62158 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim27Q62158 Arhgef2-208ENSMUST00000175911 2030 ntAPPRIS ALT2 TSL 5 BASIC16.67■□□□□ 0.26
Trim27Q62158 Sall2-202ENSMUST00000135523 4773 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim27Q62158 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim27Q62158 Grm5-204ENSMUST00000155358 4500 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim27Q62158 Magi1-201ENSMUST00000055224 7007 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim27Q62158 Wdr90-201ENSMUST00000079461 5991 ntAPPRIS P2 TSL 5 BASIC16.67■□□□□ 0.26
Trim27Q62158 Kcnh7-202ENSMUST00000112452 2849 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim27Q62158 Fndc3a-201ENSMUST00000089017 6143 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim27Q62158 Tpgs2-201ENSMUST00000115817 4159 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim27Q62158 Spaca3-202ENSMUST00000103223 947 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim27Q62158 Gm26517-201ENSMUST00000181279 1172 ntTSL 1 (best) BASIC16.67■□□□□ 0.26
Trim27Q62158 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC16.67■□□□□ 0.26
Trim27Q62158 Gm5626-201ENSMUST00000222151 1058 ntBASIC16.67■□□□□ 0.26
Trim27Q62158 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim27Q62158 Gm10188-201ENSMUST00000086544 720 ntAPPRIS P1 BASIC16.67■□□□□ 0.26
Trim27Q62158 Rprd1b-202ENSMUST00000103123 4504 ntAPPRIS P3 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim27Q62158 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim27Q62158 Sectm1a-203ENSMUST00000106119 1302 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim27Q62158 Gab3-201ENSMUST00000037374 2153 ntAPPRIS P2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim27Q62158 Ccdc157-201ENSMUST00000093381 5015 ntAPPRIS ALT2 TSL 1 (best) BASIC16.67■□□□□ 0.26
Trim27Q62158 Pnn-201ENSMUST00000021381 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim27Q62158 D230025D16Rik-201ENSMUST00000034361 2916 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim27Q62158 Spcs2-201ENSMUST00000036274 2909 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim27Q62158 Myocd-202ENSMUST00000102635 4935 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim27Q62158 6030458C11Rik-202ENSMUST00000227299 3206 ntBASIC16.66■□□□□ 0.26
Trim27Q62158 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim27Q62158 Gm44065-201ENSMUST00000203184 3527 ntBASIC16.66■□□□□ 0.26
Trim27Q62158 Gm28230-201ENSMUST00000053932 3527 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim27Q62158 Shank3-201ENSMUST00000039074 7131 ntAPPRIS P2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim27Q62158 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim27Q62158 Cpne4-201ENSMUST00000057742 3959 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim27Q62158 AI839979-202ENSMUST00000201790 1539 ntTSL 2 BASIC16.66■□□□□ 0.26
Trim27Q62158 Tacc1-202ENSMUST00000084512 6471 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim27Q62158 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim27Q62158 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC16.66■□□□□ 0.26
Trim27Q62158 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim27Q62158 Sgms1-212ENSMUST00000151289 2488 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim27Q62158 Gm17344-202ENSMUST00000173980 621 ntTSL 5 BASIC16.66■□□□□ 0.26
Trim27Q62158 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim27Q62158 Dnpep-209ENSMUST00000187836 1862 ntAPPRIS P3 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim27Q62158 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim27Q62158 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim27Q62158 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim27Q62158 AC155258.1-201ENSMUST00000219303 253 ntBASIC16.66■□□□□ 0.26
Trim27Q62158 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim27Q62158 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim27Q62158 Hnrnpf-210ENSMUST00000180341 1922 ntAPPRIS P1 BASIC16.66■□□□□ 0.26
Trim27Q62158 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim27Q62158 Nrf1-211ENSMUST00000115212 3584 ntTSL 1 (best) BASIC16.66■□□□□ 0.26
Trim27Q62158 Cyp2u1-201ENSMUST00000106337 4378 ntAPPRIS P1 TSL 1 (best) BASIC16.66■□□□□ 0.26
Trim27Q62158 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trim27Q62158 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim27Q62158 Rwdd2a-201ENSMUST00000034988 1355 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim27Q62158 Hhatl-202ENSMUST00000163981 1744 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim27Q62158 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC16.65■□□□□ 0.26
Trim27Q62158 Epb41l2-201ENSMUST00000053748 4385 ntAPPRIS P2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim27Q62158 Arhgap27os3-201ENSMUST00000124462 2729 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim27Q62158 Gm17705-201ENSMUST00000172285 1555 ntTSL 1 (best) BASIC16.65■□□□□ 0.26
Trim27Q62158 Eci2-211ENSMUST00000171229 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim27Q62158 B230206H07Rik-202ENSMUST00000134845 3269 ntTSL 5 BASIC16.65■□□□□ 0.26
Trim27Q62158 Ugt1a6a-201ENSMUST00000014263 2265 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim27Q62158 Zhx3-203ENSMUST00000109460 4480 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim27Q62158 Rassf5-201ENSMUST00000027688 3485 ntAPPRIS P1 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim27Q62158 Cpsf4l-205ENSMUST00000173655 1213 ntAPPRIS P3 TSL 1 (best) BASIC16.65■□□□□ 0.26
Trim27Q62158 Tbc1d17-209ENSMUST00000207293 692 ntTSL 3 BASIC16.65■□□□□ 0.26
Trim27Q62158 AC192088.1-201ENSMUST00000227561 301 ntBASIC16.65■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 36 ms