Protein–RNA interactions for Protein: Q61602

Gli3, Transcriptional activator GLI3, mousemouse

Predictions only

Length 1,583 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Gli3Q61602 Pomgnt1-201ENSMUST00000106494 2226 ntTSL 1 (best) BASIC17.85■□□□□ 0.45
Gli3Q61602 Trp73-204ENSMUST00000105644 5042 ntAPPRIS P3 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gli3Q61602 Rnf4-207ENSMUST00000182709 3046 ntAPPRIS P1 TSL 1 (best) BASIC17.85■□□□□ 0.45
Gli3Q61602 Zfp804a-201ENSMUST00000047527 4620 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gli3Q61602 Tnfaip2-202ENSMUST00000109792 3284 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gli3Q61602 Dnajb12-203ENSMUST00000142819 1495 ntAPPRIS P2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gli3Q61602 Rab10-201ENSMUST00000021001 3513 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gli3Q61602 Por-202ENSMUST00000122113 2606 ntTSL 2 BASIC17.84■□□□□ 0.45
Gli3Q61602 Acly-202ENSMUST00000107385 1741 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Gli3Q61602 Ankrd29-202ENSMUST00000122408 850 ntTSL 5 BASIC17.84■□□□□ 0.45
Gli3Q61602 Gm45398-201ENSMUST00000210561 165 ntBASIC17.84■□□□□ 0.45
Gli3Q61602 Gm46204-201ENSMUST00000219800 411 ntTSL 3 BASIC17.84■□□□□ 0.45
Gli3Q61602 AC154184.3-201ENSMUST00000225620 1090 ntBASIC17.84■□□□□ 0.45
Gli3Q61602 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC17.84■□□□□ 0.45
Gli3Q61602 Gm5965-201ENSMUST00000009191 588 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Gli3Q61602 Gm2673-201ENSMUST00000120958 1608 ntBASIC17.84■□□□□ 0.45
Gli3Q61602 Ube2r2-201ENSMUST00000040008 3600 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gli3Q61602 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Gli3Q61602 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gli3Q61602 Rspo4-201ENSMUST00000042217 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gli3Q61602 Wipi1-201ENSMUST00000047186 3338 ntTSL 1 (best) BASIC17.84■□□□□ 0.45
Gli3Q61602 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC17.84■□□□□ 0.45
Gli3Q61602 Plcl2-201ENSMUST00000043938 4050 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gli3Q61602 Ltbp3-201ENSMUST00000081496 5190 ntAPPRIS P1 TSL 5 BASIC17.84■□□□□ 0.45
Gli3Q61602 Sh3bp2-203ENSMUST00000118545 3034 ntAPPRIS ALT2 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gli3Q61602 Kctd20-208ENSMUST00000168507 2400 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gli3Q61602 Nrg3-201ENSMUST00000166968 4011 ntAPPRIS P3 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gli3Q61602 Srrm1-208ENSMUST00000136342 3152 ntAPPRIS P3 TSL 5 BASIC17.84■□□□□ 0.45
Gli3Q61602 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC17.84■□□□□ 0.45
Gli3Q61602 Ncf1-205ENSMUST00000144086 2882 ntTSL 2 BASIC17.84■□□□□ 0.45
Gli3Q61602 4921514A10Rik-201ENSMUST00000181450 2114 ntTSL 5 BASIC17.84■□□□□ 0.45
Gli3Q61602 Anks1b-213ENSMUST00000182284 2607 ntTSL 5 BASIC17.84■□□□□ 0.45
Gli3Q61602 Gm7899-201ENSMUST00000192935 1897 ntBASIC17.84■□□□□ 0.45
Gli3Q61602 Ddc-210ENSMUST00000178704 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Gli3Q61602 Cfap77-204ENSMUST00000189711 1759 ntAPPRIS ALT2 TSL 5 BASIC17.83■□□□□ 0.45
Gli3Q61602 Map7d1-202ENSMUST00000106132 3195 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.45
Gli3Q61602 Nupl2-201ENSMUST00000049887 2914 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Gli3Q61602 Gm13609-201ENSMUST00000141023 589 ntTSL 3 BASIC17.83■□□□□ 0.45
Gli3Q61602 2610316D01Rik-201ENSMUST00000181047 924 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Gli3Q61602 AC160052.1-201ENSMUST00000213173 1248 ntTSL 5 BASIC17.83■□□□□ 0.45
Gli3Q61602 AC110091.3-202ENSMUST00000217104 791 ntTSL 5 BASIC17.83■□□□□ 0.45
Gli3Q61602 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC17.83■□□□□ 0.45
Gli3Q61602 Sftpd-201ENSMUST00000077136 1275 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Gli3Q61602 Cachd1-201ENSMUST00000030257 5765 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Gli3Q61602 Herpud1-205ENSMUST00000161576 1952 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.45
Gli3Q61602 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC17.83■□□□□ 0.45
Gli3Q61602 Ppp1r3g-201ENSMUST00000132661 2361 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
Gli3Q61602 Lgi3-201ENSMUST00000047331 3174 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gli3Q61602 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gli3Q61602 Prg4-207ENSMUST00000162367 1480 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
Gli3Q61602 Zbtb33-202ENSMUST00000115142 2567 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gli3Q61602 Armcx1-206ENSMUST00000113201 2228 ntAPPRIS P1 TSL 2 BASIC17.83■□□□□ 0.44
Gli3Q61602 Rad51-201ENSMUST00000028795 3368 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gli3Q61602 Rps9-203ENSMUST00000108624 478 ntTSL 5 BASIC17.83■□□□□ 0.44
Gli3Q61602 Agtpbp1-219ENSMUST00000170378 653 ntTSL 3 BASIC17.83■□□□□ 0.44
Gli3Q61602 Mir6998-201ENSMUST00000183343 64 ntBASIC17.83■□□□□ 0.44
Gli3Q61602 Gm9139-201ENSMUST00000218817 700 ntBASIC17.83■□□□□ 0.44
Gli3Q61602 Gm18974-201ENSMUST00000221478 1031 ntBASIC17.83■□□□□ 0.44
Gli3Q61602 Smco2-201ENSMUST00000032433 1276 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
Gli3Q61602 Arhgap23-203ENSMUST00000121799 5816 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
Gli3Q61602 Gngt2-201ENSMUST00000036088 1587 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gli3Q61602 Spon2-201ENSMUST00000046186 2045 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gli3Q61602 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gli3Q61602 5430400D12Rik-201ENSMUST00000181717 1690 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Gli3Q61602 Slc22a3-201ENSMUST00000024595 3501 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gli3Q61602 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC17.82■□□□□ 0.44
Gli3Q61602 Gstm4-202ENSMUST00000106670 777 ntTSL 3 BASIC17.82■□□□□ 0.44
Gli3Q61602 Gm11246-201ENSMUST00000120880 345 ntBASIC17.82■□□□□ 0.44
Gli3Q61602 Gm11354-201ENSMUST00000121974 422 ntBASIC17.82■□□□□ 0.44
Gli3Q61602 Gm13257-201ENSMUST00000132840 665 ntTSL 3 BASIC17.82■□□□□ 0.44
Gli3Q61602 Fgfr3-ps-201ENSMUST00000195511 1137 ntBASIC17.82■□□□□ 0.44
Gli3Q61602 4930447K03Rik-201ENSMUST00000222745 1033 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Gli3Q61602 Tas2r126-201ENSMUST00000059534 930 ntAPPRIS P1 BASIC17.82■□□□□ 0.44
Gli3Q61602 Itpk1-201ENSMUST00000046518 2918 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gli3Q61602 Gm4793-201ENSMUST00000067468 2616 ntTSL 2 BASIC17.82■□□□□ 0.44
Gli3Q61602 Gm8108-202ENSMUST00000170207 1961 ntAPPRIS P5 TSL 5 BASIC17.82■□□□□ 0.44
Gli3Q61602 Gm26666-201ENSMUST00000180763 2461 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
Gli3Q61602 Olfr520-202ENSMUST00000220185 1330 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
Gli3Q61602 Mark2-202ENSMUST00000032557 4488 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
Gli3Q61602 Plcxd3-201ENSMUST00000061925 1851 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gli3Q61602 Cnksr3-201ENSMUST00000015346 3447 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gli3Q61602 Sphk2-203ENSMUST00000210060 2577 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gli3Q61602 Slc6a9-201ENSMUST00000030269 3479 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gli3Q61602 Gm45242-201ENSMUST00000210666 2129 ntBASIC17.81■□□□□ 0.44
Gli3Q61602 B230217C12Rik-202ENSMUST00000155954 2181 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Gli3Q61602 Sun3-202ENSMUST00000102909 1205 ntAPPRIS P3 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gli3Q61602 Rhox3c-202ENSMUST00000115189 648 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Gli3Q61602 Plgrkt-209ENSMUST00000152936 604 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Gli3Q61602 Agtpbp1-216ENSMUST00000168821 721 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Gli3Q61602 H2-Bl-202ENSMUST00000183560 316 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Gli3Q61602 Rhox3a2-204ENSMUST00000184565 823 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Gli3Q61602 AC126799.1-201ENSMUST00000221976 246 ntBASIC17.81■□□□□ 0.44
Gli3Q61602 Gbgt1-201ENSMUST00000028172 1084 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gli3Q61602 Rhox3e-201ENSMUST00000081327 648 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
Gli3Q61602 Rhox3a2-201ENSMUST00000096459 828 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gli3Q61602 A230077H06Rik-201ENSMUST00000188579 2918 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
Gli3Q61602 Hnrnpul2-201ENSMUST00000096753 5726 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gli3Q61602 Krt32-201ENSMUST00000107419 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Gli3Q61602 Tmem121b-201ENSMUST00000178687 4869 ntAPPRIS P1 BASIC17.81■□□□□ 0.44
Gli3Q61602 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
Retrieved 100 of 76,532 protein–RNA pairs in 28.7 ms