Protein–RNA interactions for Protein: Q3TL54

Trim43a, Tripartite motif-containing protein 43A, mousemouse

Predictions only

Length 445 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim43aQ3TL54 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43aQ3TL54 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43aQ3TL54 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43aQ3TL54 Bbs5-201ENSMUST00000074963 1468 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43aQ3TL54 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43aQ3TL54 Creb3l3-201ENSMUST00000117422 2294 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43aQ3TL54 Dpysl5-203ENSMUST00000114729 5191 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43aQ3TL54 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.43□□□□□ -0.1
Trim43aQ3TL54 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43aQ3TL54 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43aQ3TL54 Bscl2-203ENSMUST00000159634 1684 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43aQ3TL54 Coq10a-205ENSMUST00000220027 1307 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trim43aQ3TL54 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43aQ3TL54 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43aQ3TL54 Arrdc4-201ENSMUST00000048068 3905 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43aQ3TL54 Efhd1-201ENSMUST00000027472 1854 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43aQ3TL54 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trim43aQ3TL54 Gpnmb-203ENSMUST00000204260 2430 ntAPPRIS ALT2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43aQ3TL54 BC048403-202ENSMUST00000136432 2968 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43aQ3TL54 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43aQ3TL54 Ing4-201ENSMUST00000032480 1629 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43aQ3TL54 Pcyox1-201ENSMUST00000032065 4295 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43aQ3TL54 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43aQ3TL54 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC14.42□□□□□ -0.1
Trim43aQ3TL54 Fis1-203ENSMUST00000111097 601 ntTSL 2 BASIC14.42□□□□□ -0.1
Trim43aQ3TL54 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC14.42□□□□□ -0.1
Trim43aQ3TL54 Fis1-201ENSMUST00000019198 786 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43aQ3TL54 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43aQ3TL54 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43aQ3TL54 Apc-202ENSMUST00000079362 8867 ntAPPRIS P2 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43aQ3TL54 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Trim43aQ3TL54 Lpar5-203ENSMUST00000171989 1458 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Trim43aQ3TL54 4930513N10Rik-204ENSMUST00000212647 3957 ntBASIC14.42□□□□□ -0.1
Trim43aQ3TL54 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC14.42□□□□□ -0.1
Trim43aQ3TL54 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Trim43aQ3TL54 Gm27194-201ENSMUST00000175753 2936 ntBASIC14.42□□□□□ -0.1
Trim43aQ3TL54 Atxn2l-201ENSMUST00000040202 3853 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43aQ3TL54 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43aQ3TL54 Neu2-204ENSMUST00000165109 1824 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43aQ3TL54 Pip5k1c-201ENSMUST00000045469 4323 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43aQ3TL54 Zfp422-202ENSMUST00000079749 3187 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43aQ3TL54 Def8-203ENSMUST00000093049 1909 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43aQ3TL54 Ddx31-201ENSMUST00000113853 3271 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43aQ3TL54 Actn4-201ENSMUST00000068045 3877 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43aQ3TL54 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC14.41□□□□□ -0.1
Trim43aQ3TL54 Dnmt3b-205ENSMUST00000103150 4070 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43aQ3TL54 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC14.41□□□□□ -0.1
Trim43aQ3TL54 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trim43aQ3TL54 Irak1-206ENSMUST00000114354 3835 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43aQ3TL54 Gm13015-201ENSMUST00000118674 204 ntBASIC14.41□□□□□ -0.1
Trim43aQ3TL54 Ighv1-51-201ENSMUST00000192903 354 ntBASIC14.41□□□□□ -0.1
Trim43aQ3TL54 Gm43474-201ENSMUST00000196415 774 ntBASIC14.41□□□□□ -0.1
Trim43aQ3TL54 Gm43125-201ENSMUST00000201724 730 ntBASIC14.41□□□□□ -0.1
Trim43aQ3TL54 Gm4971-201ENSMUST00000205991 1108 ntBASIC14.41□□□□□ -0.1
Trim43aQ3TL54 Tmem86b-204ENSMUST00000206610 522 ntTSL 3 BASIC14.41□□□□□ -0.1
Trim43aQ3TL54 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43aQ3TL54 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43aQ3TL54 Gdpd3-201ENSMUST00000032944 1148 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43aQ3TL54 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trim43aQ3TL54 Dgcr8-202ENSMUST00000115633 4522 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trim43aQ3TL54 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trim43aQ3TL54 Abhd3-202ENSMUST00000117726 1890 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43aQ3TL54 AC153366.2-201ENSMUST00000219461 1984 ntBASIC14.41□□□□□ -0.1
Trim43aQ3TL54 Ahdc1-204ENSMUST00000105916 6602 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Trim43aQ3TL54 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43aQ3TL54 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43aQ3TL54 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43aQ3TL54 Gm996-204ENSMUST00000191602 4812 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Trim43aQ3TL54 Cep68-201ENSMUST00000050611 4804 ntAPPRIS P2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43aQ3TL54 Rtl6-201ENSMUST00000069476 4426 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trim43aQ3TL54 Ephb1-202ENSMUST00000085169 4101 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43aQ3TL54 Eme1-201ENSMUST00000039949 2444 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43aQ3TL54 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43aQ3TL54 4931428F04Rik-203ENSMUST00000212219 2044 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43aQ3TL54 Lrrc29-201ENSMUST00000070508 1922 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43aQ3TL54 Alkbh4-202ENSMUST00000100568 1714 ntAPPRIS P3 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43aQ3TL54 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43aQ3TL54 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Trim43aQ3TL54 Arxes2-201ENSMUST00000058119 1532 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Trim43aQ3TL54 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Dmac2-202ENSMUST00000085953 2387 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43aQ3TL54 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Phka1-206ENSMUST00000122022 6115 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Phka1-202ENSMUST00000052012 6115 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Ralgds-202ENSMUST00000100241 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Ywhab-201ENSMUST00000018470 3013 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43aQ3TL54 2900026A02Rik-201ENSMUST00000050125 5876 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Kcnab2-202ENSMUST00000105648 1576 ntAPPRIS P3 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Nfat5-201ENSMUST00000075922 4619 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43aQ3TL54 C1qtnf1-202ENSMUST00000106286 2512 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43aQ3TL54 C1qtnf1-201ENSMUST00000017590 2532 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Gm22065-201ENSMUST00000103753 110 ntBASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Gm22066-201ENSMUST00000103761 110 ntBASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Gm24932-201ENSMUST00000103763 110 ntBASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Gm24115-201ENSMUST00000103799 110 ntBASIC14.4□□□□□ -0.1
Trim43aQ3TL54 Gm22190-201ENSMUST00000103827 110 ntBASIC14.4□□□□□ -0.1
Retrieved 100 of 76,532 protein–RNA pairs in 54.1 ms