Protein–RNA interactions for Protein: Q0EEE2

Ptchd3, Patched domain-containing protein 3, mousemouse

Predictions only

Length 906 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ptchd3Q0EEE2 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ptchd3Q0EEE2 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ptchd3Q0EEE2 Cux2-202ENSMUST00000111752 8784 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ptchd3Q0EEE2 Nudt21-201ENSMUST00000034204 5010 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ptchd3Q0EEE2 Lrpprc-201ENSMUST00000112308 4393 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ptchd3Q0EEE2 Usp33-209ENSMUST00000197748 4183 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ptchd3Q0EEE2 Npr1-201ENSMUST00000029540 4066 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ptchd3Q0EEE2 Rnf214-201ENSMUST00000058720 3964 ntAPPRIS P3 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ptchd3Q0EEE2 Tlr9-201ENSMUST00000062241 3478 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ptchd3Q0EEE2 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ptchd3Q0EEE2 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ptchd3Q0EEE2 Clec18a-203ENSMUST00000188466 1973 ntAPPRIS ALT2 TSL 5 BASIC13.13□□□□□ -0.31
Ptchd3Q0EEE2 Clec18a-201ENSMUST00000039597 1998 ntAPPRIS P5 TSL 5 BASIC13.13□□□□□ -0.31
Ptchd3Q0EEE2 Nptn-206ENSMUST00000176557 1898 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ptchd3Q0EEE2 Caskin2-201ENSMUST00000041684 4929 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ptchd3Q0EEE2 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ptchd3Q0EEE2 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.13□□□□□ -0.31
Ptchd3Q0EEE2 Tmsb4x-201ENSMUST00000112172 768 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ptchd3Q0EEE2 Gm13015-201ENSMUST00000118674 204 ntBASIC13.13□□□□□ -0.31
Ptchd3Q0EEE2 Gm8116-201ENSMUST00000182917 1201 ntBASIC13.13□□□□□ -0.31
Ptchd3Q0EEE2 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ptchd3Q0EEE2 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.13□□□□□ -0.31
Ptchd3Q0EEE2 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ptchd3Q0EEE2 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ptchd3Q0EEE2 Pcnx2-204ENSMUST00000131127 3782 ntTSL 5 BASIC13.13□□□□□ -0.31
Ptchd3Q0EEE2 Klc2-202ENSMUST00000113727 2874 ntTSL 5 BASIC13.13□□□□□ -0.31
Ptchd3Q0EEE2 Gm27198-201ENSMUST00000184172 1517 ntTSL 1 (best) BASIC13.13□□□□□ -0.31
Ptchd3Q0EEE2 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.13□□□□□ -0.31
Ptchd3Q0EEE2 Lzts1-204ENSMUST00000185176 5019 ntAPPRIS P1 TSL 5 BASIC13.13□□□□□ -0.31
Ptchd3Q0EEE2 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Rfx1-204ENSMUST00000211046 3677 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Kcna6-202ENSMUST00000112242 3464 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Snx14-207ENSMUST00000174806 3082 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Mypopos-202ENSMUST00000205975 2321 ntBASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Acap1-201ENSMUST00000001631 2482 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Jpt1-201ENSMUST00000021083 1375 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Dnpep-203ENSMUST00000185419 2833 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Zfp688-201ENSMUST00000106300 1015 ntAPPRIS P1 TSL 2 BASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Pex11g-202ENSMUST00000111081 666 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Ssty1-201ENSMUST00000180056 699 ntAPPRIS P1 BASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Gm29310-201ENSMUST00000185468 696 ntBASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Gm21825-201ENSMUST00000185728 696 ntBASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Gm29109-201ENSMUST00000185895 696 ntBASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Gm21896-201ENSMUST00000186520 696 ntBASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Gm21873-201ENSMUST00000186728 696 ntBASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Gm21794-201ENSMUST00000187056 696 ntBASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Gm21880-201ENSMUST00000187275 696 ntBASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Gm21826-201ENSMUST00000187451 696 ntBASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Gm21198-201ENSMUST00000188393 696 ntBASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Gm21749-201ENSMUST00000189343 696 ntBASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Gm21901-201ENSMUST00000189568 696 ntBASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Gm29424-201ENSMUST00000189716 696 ntBASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Gm28599-201ENSMUST00000189838 694 ntBASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Gm21867-201ENSMUST00000189917 696 ntBASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Gm29269-201ENSMUST00000190087 696 ntBASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Gm21722-201ENSMUST00000190153 696 ntBASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Gm28423-201ENSMUST00000190701 696 ntBASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Gm21899-201ENSMUST00000190745 696 ntBASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Gm21910-201ENSMUST00000191163 696 ntBASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Gm21849-201ENSMUST00000191571 696 ntBASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Gm28678-201ENSMUST00000191593 696 ntBASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Gm20910-201ENSMUST00000193268 696 ntBASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Gm21871-201ENSMUST00000194621 696 ntBASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Gm18049-201ENSMUST00000208909 581 ntBASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Ggn-201ENSMUST00000033886 588 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Hspb2-201ENSMUST00000042790 773 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Ephb3-201ENSMUST00000006112 4185 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Gm43423-201ENSMUST00000198390 2094 ntBASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Bud13-201ENSMUST00000074957 2539 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Myc-205ENSMUST00000161976 2338 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Myc-201ENSMUST00000022971 2338 ntAPPRIS ALT1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Ptp4a3-202ENSMUST00000163582 3808 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 C5ar1-201ENSMUST00000050770 2481 ntAPPRIS P1 TSL 3 BASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Mlxip-201ENSMUST00000068237 7303 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Daglb-201ENSMUST00000045593 4651 ntAPPRIS P1 TSL 1 (best) BASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Srl-201ENSMUST00000023161 5000 ntTSL 1 (best) BASIC13.12□□□□□ -0.31
Ptchd3Q0EEE2 Fam219a-202ENSMUST00000108050 3321 ntTSL 5 BASIC13.11□□□□□ -0.31
Ptchd3Q0EEE2 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptchd3Q0EEE2 Procr-201ENSMUST00000029140 1597 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptchd3Q0EEE2 Bach2-202ENSMUST00000108180 8882 ntAPPRIS P2 TSL 5 BASIC13.11□□□□□ -0.31
Ptchd3Q0EEE2 Cldn14-204ENSMUST00000169391 1456 ntAPPRIS P1 TSL 2 BASIC13.11□□□□□ -0.31
Ptchd3Q0EEE2 Phactr3-202ENSMUST00000103066 2680 ntAPPRIS P4 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptchd3Q0EEE2 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptchd3Q0EEE2 Arl14ep-201ENSMUST00000028536 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptchd3Q0EEE2 Ltbp2-203ENSMUST00000163189 6470 ntAPPRIS ALT2 TSL 1 (best) BASIC13.11□□□□□ -0.31
Ptchd3Q0EEE2 Gm23935-201ENSMUST00000102303 57 ntBASIC13.11□□□□□ -0.31
Ptchd3Q0EEE2 Gm24270-201ENSMUST00000102326 57 ntBASIC13.11□□□□□ -0.31
Ptchd3Q0EEE2 Gm25287-201ENSMUST00000103846 110 ntBASIC13.11□□□□□ -0.31
Ptchd3Q0EEE2 Gm22918-201ENSMUST00000103855 110 ntBASIC13.11□□□□□ -0.31
Retrieved 100 of 76,532 protein–RNA pairs in 61.2 ms