Protein–RNA interactions for Protein: Q09XV5

Chd8, Chromodomain-helicase-DNA-binding protein 8, mousemouse

Known RBP Predictions only

Length 2,582 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Chd8Q09XV5 Tff1-201ENSMUST00000024831 478 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chd8Q09XV5 Cox17-201ENSMUST00000050273 444 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chd8Q09XV5 Prss55-201ENSMUST00000089338 1032 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chd8Q09XV5 Sphk1-202ENSMUST00000063446 2527 ntAPPRIS ALT2 TSL 2 BASIC12.04□□□□□ -0.48
Chd8Q09XV5 Hdac8-201ENSMUST00000087916 1936 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chd8Q09XV5 Fam83g-202ENSMUST00000093019 4778 ntAPPRIS P1 TSL 1 (best) BASIC12.04□□□□□ -0.48
Chd8Q09XV5 Kifc3-212ENSMUST00000213004 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd8Q09XV5 Il1f5-205ENSMUST00000147885 1392 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Chd8Q09XV5 Pnoc-202ENSMUST00000224594 1388 ntAPPRIS ALT2 BASIC12.03□□□□□ -0.48
Chd8Q09XV5 Slc6a1-204ENSMUST00000204074 1740 ntTSL 5 BASIC12.03□□□□□ -0.48
Chd8Q09XV5 Mxra8-201ENSMUST00000030947 2203 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd8Q09XV5 Art3-201ENSMUST00000113083 1561 ntAPPRIS P3 TSL 5 BASIC12.03□□□□□ -0.48
Chd8Q09XV5 Dnpep-202ENSMUST00000113605 1571 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd8Q09XV5 F830212C03Rik-201ENSMUST00000191701 2285 ntBASIC12.03□□□□□ -0.48
Chd8Q09XV5 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC12.03□□□□□ -0.48
Chd8Q09XV5 Bach2os-202ENSMUST00000136149 687 ntTSL 2 BASIC12.03□□□□□ -0.48
Chd8Q09XV5 Fhit-206ENSMUST00000162278 981 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd8Q09XV5 Gm38161-201ENSMUST00000195344 576 ntTSL 2 BASIC12.03□□□□□ -0.48
Chd8Q09XV5 Gm43416-201ENSMUST00000201916 1015 ntBASIC12.03□□□□□ -0.48
Chd8Q09XV5 Ap3s1-202ENSMUST00000224622 978 ntBASIC12.03□□□□□ -0.48
Chd8Q09XV5 Olfr354-201ENSMUST00000068475 1084 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Chd8Q09XV5 Gm5544-201ENSMUST00000098828 891 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Chd8Q09XV5 Ttll5-203ENSMUST00000095536 4150 ntAPPRIS ALT2 TSL 2 BASIC12.03□□□□□ -0.48
Chd8Q09XV5 Rundc3b-201ENSMUST00000047485 3677 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd8Q09XV5 Atf3-201ENSMUST00000027941 1984 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd8Q09XV5 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd8Q09XV5 Mier2-203ENSMUST00000165028 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd8Q09XV5 Ap5m1-205ENSMUST00000227431 3757 ntBASIC12.03□□□□□ -0.48
Chd8Q09XV5 Rnf133-202ENSMUST00000115354 1333 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Chd8Q09XV5 Dennd4b-202ENSMUST00000129564 5647 ntAPPRIS ALT2 TSL 5 BASIC12.03□□□□□ -0.48
Chd8Q09XV5 Zfp28-201ENSMUST00000081022 4447 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd8Q09XV5 Rgs6-216ENSMUST00000200911 2626 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd8Q09XV5 Pitpnm2-210ENSMUST00000162812 6952 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd8Q09XV5 Trim11-201ENSMUST00000093061 2251 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd8Q09XV5 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd8Q09XV5 Zfand5-201ENSMUST00000025659 2834 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd8Q09XV5 Slc35b3-202ENSMUST00000167513 1778 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd8Q09XV5 Hdgfl1-201ENSMUST00000055915 1993 ntAPPRIS P1 BASIC12.03□□□□□ -0.48
Chd8Q09XV5 Slc22a7-201ENSMUST00000087012 2007 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd8Q09XV5 Sirpa-203ENSMUST00000103202 3982 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd8Q09XV5 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.03□□□□□ -0.48
Chd8Q09XV5 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Chd8Q09XV5 Gm11941-201ENSMUST00000119904 610 ntBASIC12.03□□□□□ -0.48
Chd8Q09XV5 Rpl18a-ps1-201ENSMUST00000161190 523 ntBASIC12.03□□□□□ -0.48
Chd8Q09XV5 Smco4-202ENSMUST00000178999 820 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd8Q09XV5 Mir6998-201ENSMUST00000183343 64 ntBASIC12.03□□□□□ -0.48
Chd8Q09XV5 Gm28388-201ENSMUST00000186262 437 ntBASIC12.03□□□□□ -0.48
Chd8Q09XV5 4930430O22Rik-202ENSMUST00000202548 579 ntBASIC12.03□□□□□ -0.48
Chd8Q09XV5 Gm9132-201ENSMUST00000210182 832 ntBASIC12.03□□□□□ -0.48
Chd8Q09XV5 Gm9004-201ENSMUST00000218739 1222 ntBASIC12.03□□□□□ -0.48
Chd8Q09XV5 AC173210.1-201ENSMUST00000222341 1131 ntBASIC12.03□□□□□ -0.48
Chd8Q09XV5 Sec24a-203ENSMUST00000109092 2094 ntTSL 1 (best) BASIC12.03□□□□□ -0.48
Chd8Q09XV5 Nf2-201ENSMUST00000053079 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd8Q09XV5 Kcnn1-208ENSMUST00000212611 2528 ntAPPRIS P2 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd8Q09XV5 Ccna2-201ENSMUST00000029270 2965 ntAPPRIS P1 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd8Q09XV5 Fam114a2-201ENSMUST00000020831 2557 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd8Q09XV5 Mier2-201ENSMUST00000062855 2562 ntAPPRIS P3 TSL 1 (best) BASIC12.03□□□□□ -0.48
Chd8Q09XV5 Gm20628-201ENSMUST00000177363 3215 ntBASIC12.03□□□□□ -0.48
Chd8Q09XV5 Qsox1-207ENSMUST00000194632 2433 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chd8Q09XV5 Slc5a5-201ENSMUST00000000809 2928 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chd8Q09XV5 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC12.02□□□□□ -0.48
Chd8Q09XV5 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chd8Q09XV5 Cnr1-201ENSMUST00000057188 5807 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chd8Q09XV5 Slc6a9-210ENSMUST00000169885 1876 ntTSL 5 BASIC12.02□□□□□ -0.48
Chd8Q09XV5 Skor1-201ENSMUST00000055281 3657 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chd8Q09XV5 Cyp2a12-201ENSMUST00000075552 1681 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chd8Q09XV5 Epn1-202ENSMUST00000098845 2565 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chd8Q09XV5 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chd8Q09XV5 Arid1a-202ENSMUST00000105897 8175 ntAPPRIS P2 TSL 5 BASIC12.02□□□□□ -0.48
Chd8Q09XV5 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Chd8Q09XV5 Mir6941-201ENSMUST00000184711 59 ntBASIC12.02□□□□□ -0.48
Chd8Q09XV5 4933408A14Rik-201ENSMUST00000199037 729 ntTSL 1 (best) BASIC12.02□□□□□ -0.48
Chd8Q09XV5 AY036118-201ENSMUST00000200021 923 ntBASIC12.02□□□□□ -0.48
Chd8Q09XV5 Gm40709-203ENSMUST00000219695 973 ntTSL 5 BASIC12.02□□□□□ -0.48
Chd8Q09XV5 Riiad1-201ENSMUST00000029785 630 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chd8Q09XV5 Saa2-201ENSMUST00000075982 606 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chd8Q09XV5 Tor1aip1-201ENSMUST00000027738 1952 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chd8Q09XV5 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chd8Q09XV5 Tmcc3-201ENSMUST00000065060 5530 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chd8Q09XV5 Adipor1-202ENSMUST00000112237 3446 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.48
Chd8Q09XV5 Snx16-201ENSMUST00000029047 2288 ntAPPRIS P3 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chd8Q09XV5 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.02□□□□□ -0.49
Chd8Q09XV5 Rab32-201ENSMUST00000019974 2149 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chd8Q09XV5 Chst4-202ENSMUST00000211894 2146 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chd8Q09XV5 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Chd8Q09XV5 Gnl3-201ENSMUST00000037739 1947 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chd8Q09XV5 Stk40-202ENSMUST00000116286 3860 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Chd8Q09XV5 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chd8Q09XV5 Tbc1d10b-201ENSMUST00000120705 3614 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chd8Q09XV5 Luc7l2-213ENSMUST00000163047 3141 ntTSL 1 (best) BASIC12.02□□□□□ -0.49
Chd8Q09XV5 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chd8Q09XV5 Erf-201ENSMUST00000045847 3505 ntAPPRIS P2 TSL 1 (best) BASIC12.02□□□□□ -0.49
Chd8Q09XV5 Cenpx-203ENSMUST00000106154 873 ntTSL 2 BASIC12.02□□□□□ -0.49
Chd8Q09XV5 Gm12783-201ENSMUST00000121425 397 ntBASIC12.02□□□□□ -0.49
Chd8Q09XV5 Apobr-203ENSMUST00000137646 457 ntAPPRIS ALT2 TSL 2 BASIC12.02□□□□□ -0.49
Chd8Q09XV5 Gm29615-201ENSMUST00000185371 697 ntBASIC12.02□□□□□ -0.49
Chd8Q09XV5 Gm28224-201ENSMUST00000186078 697 ntBASIC12.02□□□□□ -0.49
Chd8Q09XV5 Gm29001-201ENSMUST00000186177 697 ntBASIC12.02□□□□□ -0.49
Chd8Q09XV5 Gm28292-201ENSMUST00000186593 697 ntBASIC12.02□□□□□ -0.49
Chd8Q09XV5 Gm28101-201ENSMUST00000187608 697 ntBASIC12.02□□□□□ -0.49
Retrieved 100 of 76,532 protein–RNA pairs in 45.8 ms