Protein–RNA interactions for Protein: Q00780

Col8a1, Collagen alpha-1(VIII) chain, mousemouse

Predictions only

Length 744 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Col8a1Q00780 Fbxo10-201ENSMUST00000052236 4635 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col8a1Q00780 Gins2-201ENSMUST00000034278 3900 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col8a1Q00780 AC113441.2-201ENSMUST00000221538 1468 ntBASIC11.58□□□□□ -0.56
Col8a1Q00780 Kcnc2-201ENSMUST00000092175 5046 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col8a1Q00780 Dnajc27-201ENSMUST00000020986 4698 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col8a1Q00780 Pcsk6-202ENSMUST00000098391 4207 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col8a1Q00780 Kctd14-204ENSMUST00000205577 2310 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col8a1Q00780 Psmd13-201ENSMUST00000026560 1989 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col8a1Q00780 Gm10605-202ENSMUST00000183019 3198 ntBASIC11.58□□□□□ -0.56
Col8a1Q00780 Fbxw7-201ENSMUST00000029727 2221 ntAPPRIS P3 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col8a1Q00780 Fkbp4-201ENSMUST00000032508 2217 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col8a1Q00780 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC11.58□□□□□ -0.56
Col8a1Q00780 Gm12280-201ENSMUST00000155836 1624 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col8a1Q00780 Rph3al-203ENSMUST00000108420 695 ntTSL 3 BASIC11.58□□□□□ -0.56
Col8a1Q00780 Styxl1-205ENSMUST00000111164 1243 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col8a1Q00780 Rhox7-ps1-201ENSMUST00000117595 806 ntBASIC11.58□□□□□ -0.56
Col8a1Q00780 Gm13369-201ENSMUST00000119442 987 ntBASIC11.58□□□□□ -0.56
Col8a1Q00780 Gm13461-201ENSMUST00000120980 662 ntBASIC11.58□□□□□ -0.56
Col8a1Q00780 Gm10156-201ENSMUST00000122364 462 ntBASIC11.58□□□□□ -0.56
Col8a1Q00780 1700012C08Rik-201ENSMUST00000141554 363 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col8a1Q00780 Gm12714-201ENSMUST00000143391 669 ntTSL 3 BASIC11.58□□□□□ -0.56
Col8a1Q00780 Gm11754-201ENSMUST00000156576 661 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col8a1Q00780 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col8a1Q00780 Prss51-202ENSMUST00000165710 953 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col8a1Q00780 Glo1-202ENSMUST00000167624 895 ntAPPRIS P1 TSL 2 BASIC11.58□□□□□ -0.56
Col8a1Q00780 Gm4271-201ENSMUST00000174444 973 ntBASIC11.58□□□□□ -0.56
Col8a1Q00780 Gm16505-201ENSMUST00000179981 232 ntBASIC11.58□□□□□ -0.56
Col8a1Q00780 Gm26787-201ENSMUST00000180474 608 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col8a1Q00780 4930516B21Rik-201ENSMUST00000181600 1195 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col8a1Q00780 Rps4l-202ENSMUST00000204242 789 ntBASIC11.58□□□□□ -0.56
Col8a1Q00780 Nsd1-205ENSMUST00000224693 852 ntBASIC11.58□□□□□ -0.56
Col8a1Q00780 Slc7a7-209ENSMUST00000226753 2126 ntAPPRIS P1 BASIC11.58□□□□□ -0.56
Col8a1Q00780 Rit1-201ENSMUST00000029692 1204 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col8a1Q00780 Tsc22d4-201ENSMUST00000031738 1043 ntTSL 3 BASIC11.58□□□□□ -0.56
Col8a1Q00780 Gm10268-201ENSMUST00000085340 555 ntBASIC11.58□□□□□ -0.56
Col8a1Q00780 Mtus2-204ENSMUST00000110514 1532 ntTSL 5 BASIC11.58□□□□□ -0.56
Col8a1Q00780 Sgce-202ENSMUST00000090686 1547 ntTSL 5 BASIC11.58□□□□□ -0.56
Col8a1Q00780 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col8a1Q00780 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col8a1Q00780 Rexo4-202ENSMUST00000114020 2278 ntAPPRIS P2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col8a1Q00780 Bdp1-201ENSMUST00000038104 9921 ntAPPRIS P2 TSL 5 BASIC11.58□□□□□ -0.56
Col8a1Q00780 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col8a1Q00780 Bmper-201ENSMUST00000071982 3791 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col8a1Q00780 Gpr160-203ENSMUST00000108259 1916 ntAPPRIS P1 TSL 3 BASIC11.58□□□□□ -0.56
Col8a1Q00780 Rai2-202ENSMUST00000112338 2165 ntAPPRIS P1 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col8a1Q00780 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col8a1Q00780 Zfr2-201ENSMUST00000117798 3349 ntAPPRIS P1 TSL 5 BASIC11.58□□□□□ -0.56
Col8a1Q00780 Fam169b-206ENSMUST00000210558 2815 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Col8a1Q00780 Rad18-201ENSMUST00000068487 2577 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col8a1Q00780 Apc2-202ENSMUST00000105359 9173 ntAPPRIS ALT2 TSL 5 BASIC11.58□□□□□ -0.56
Col8a1Q00780 Nyap1-204ENSMUST00000212152 2499 ntAPPRIS ALT2 TSL 1 (best) BASIC11.58□□□□□ -0.56
Col8a1Q00780 Dok7-201ENSMUST00000050709 2498 ntTSL 1 (best) BASIC11.58□□□□□ -0.56
Col8a1Q00780 Dlk1-205ENSMUST00000109844 1703 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col8a1Q00780 Fer-202ENSMUST00000038080 2365 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col8a1Q00780 Trp53-206ENSMUST00000171247 1867 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col8a1Q00780 Adgrb2-206ENSMUST00000106018 4470 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Col8a1Q00780 Esyt1-201ENSMUST00000026427 3981 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col8a1Q00780 Cep63-201ENSMUST00000093791 2696 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col8a1Q00780 Acp5-203ENSMUST00000165735 1376 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col8a1Q00780 Galnt4-201ENSMUST00000161240 5089 ntAPPRIS P1 BASIC11.57□□□□□ -0.56
Col8a1Q00780 Slc34a3-201ENSMUST00000006638 2183 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col8a1Q00780 Impdh1-207ENSMUST00000162099 2580 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col8a1Q00780 Rasgef1b-209ENSMUST00000168092 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col8a1Q00780 Rasgef1b-201ENSMUST00000031276 2990 ntAPPRIS P3 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col8a1Q00780 AC161252.3-201ENSMUST00000225465 1549 ntBASIC11.57□□□□□ -0.56
Col8a1Q00780 Cacna1g-206ENSMUST00000107788 8050 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Col8a1Q00780 Cacna1g-211ENSMUST00000107793 8071 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Col8a1Q00780 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC11.57□□□□□ -0.56
Col8a1Q00780 Gm24255-201ENSMUST00000104481 128 ntBASIC11.57□□□□□ -0.56
Col8a1Q00780 Dhrs3-202ENSMUST00000105744 1226 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col8a1Q00780 Gm15370-201ENSMUST00000117158 253 ntBASIC11.57□□□□□ -0.56
Col8a1Q00780 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC11.57□□□□□ -0.56
Col8a1Q00780 Prss41-202ENSMUST00000122936 1088 ntAPPRIS ALT2 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col8a1Q00780 Gm5637-201ENSMUST00000153890 1119 ntBASIC11.57□□□□□ -0.56
Col8a1Q00780 Rwdd3-209ENSMUST00000170781 1111 ntTSL 5 BASIC11.57□□□□□ -0.56
Col8a1Q00780 Gm4819-201ENSMUST00000182170 1009 ntBASIC11.57□□□□□ -0.56
Col8a1Q00780 Sox2ot-207ENSMUST00000196987 727 ntTSL 3 BASIC11.57□□□□□ -0.56
Col8a1Q00780 Gm42550-201ENSMUST00000201553 960 ntBASIC11.57□□□□□ -0.56
Col8a1Q00780 Sct-204ENSMUST00000211667 506 ntAPPRIS ALT2 TSL 2 BASIC11.57□□□□□ -0.56
Col8a1Q00780 Fuom-201ENSMUST00000026539 685 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col8a1Q00780 Nudt22-201ENSMUST00000041686 1000 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col8a1Q00780 Rhox2a-201ENSMUST00000063340 795 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col8a1Q00780 Cmc2-201ENSMUST00000078589 523 ntTSL 2 BASIC11.57□□□□□ -0.56
Col8a1Q00780 Snora73a-201ENSMUST00000082453 205 ntBASIC11.57□□□□□ -0.56
Col8a1Q00780 Cenpm-202ENSMUST00000089157 1201 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col8a1Q00780 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col8a1Q00780 Dapk1-201ENSMUST00000044083 5304 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col8a1Q00780 Hnf1a-201ENSMUST00000031535 3191 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col8a1Q00780 Gm12620-201ENSMUST00000119791 1986 ntBASIC11.57□□□□□ -0.56
Col8a1Q00780 Gm12612-201ENSMUST00000140182 1986 ntBASIC11.57□□□□□ -0.56
Col8a1Q00780 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC11.57□□□□□ -0.56
Col8a1Q00780 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col8a1Q00780 Il4ra-201ENSMUST00000033004 5256 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col8a1Q00780 Plekha1-203ENSMUST00000120441 3777 ntAPPRIS ALT2 TSL 5 BASIC11.57□□□□□ -0.56
Col8a1Q00780 Tcf19-202ENSMUST00000160885 1732 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col8a1Q00780 Dmtn-202ENSMUST00000022695 4080 ntTSL 5 BASIC11.57□□□□□ -0.56
Col8a1Q00780 Dek-201ENSMUST00000021807 2556 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Col8a1Q00780 Gm6203-201ENSMUST00000209575 1342 ntBASIC11.57□□□□□ -0.56
Col8a1Q00780 Gm45765-202ENSMUST00000212921 1313 ntTSL 5 BASIC11.57□□□□□ -0.56
Col8a1Q00780 Inha-201ENSMUST00000037330 1475 ntAPPRIS P1 TSL 1 (best) BASIC11.57□□□□□ -0.56
Retrieved 100 of 76,532 protein–RNA pairs in 39.5 ms