Protein–RNA interactions for Protein: P97789

Xrn1, 5'-3' exoribonuclease 1, mousemouse

Known RBP Predictions only

Length 1,719 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Xrn1P97789 Adm2-201ENSMUST00000066991 1043 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Xrn1P97789 5330426L24Rik-201ENSMUST00000200008 2175 ntBASIC18.88■□□□□ 0.61
Xrn1P97789 Mapk8ip1-202ENSMUST00000111279 3274 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Xrn1P97789 Tspan13-201ENSMUST00000020896 1932 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Xrn1P97789 Cyp4f16-208ENSMUST00000169591 2242 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Xrn1P97789 Eda-203ENSMUST00000113776 5105 ntTSL 1 (best) BASIC18.88■□□□□ 0.61
Xrn1P97789 Slc35c2-204ENSMUST00000109300 2008 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Xrn1P97789 Klhl12-203ENSMUST00000116528 3277 ntAPPRIS P1 TSL 5 BASIC18.88■□□□□ 0.61
Xrn1P97789 Panx1-202ENSMUST00000164273 5732 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Xrn1P97789 Enpp5-203ENSMUST00000154166 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Xrn1P97789 Gm43134-201ENSMUST00000199434 1886 ntBASIC18.88■□□□□ 0.61
Xrn1P97789 Mir7221-201ENSMUST00000184009 72 ntBASIC18.88■□□□□ 0.61
Xrn1P97789 Gm37666-201ENSMUST00000194110 866 ntBASIC18.88■□□□□ 0.61
Xrn1P97789 Syngr4-201ENSMUST00000039049 967 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Xrn1P97789 Olfr887-201ENSMUST00000074681 930 ntAPPRIS P1 BASIC18.88■□□□□ 0.61
Xrn1P97789 Emc8-201ENSMUST00000034277 4942 ntAPPRIS P1 TSL 1 (best) BASIC18.88■□□□□ 0.61
Xrn1P97789 Cnmd-203ENSMUST00000165835 1362 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Xrn1P97789 Zfp277-202ENSMUST00000069692 2438 ntAPPRIS ALT2 TSL 1 (best) BASIC18.88■□□□□ 0.61
Xrn1P97789 Mslnl-201ENSMUST00000047098 2628 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Xrn1P97789 Pkp4-202ENSMUST00000102754 4614 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Xrn1P97789 Paxbp1-202ENSMUST00000118522 3973 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Xrn1P97789 Tnks2-201ENSMUST00000025729 6481 ntAPPRIS P1 TSL 5 BASIC18.87■□□□□ 0.61
Xrn1P97789 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Xrn1P97789 Srcin1-202ENSMUST00000107593 3733 ntAPPRIS ALT2 TSL 5 BASIC18.87■□□□□ 0.61
Xrn1P97789 Rap1a-ps2-201ENSMUST00000118467 559 ntBASIC18.87■□□□□ 0.61
Xrn1P97789 Gm16481-201ENSMUST00000119074 1227 ntBASIC18.87■□□□□ 0.61
Xrn1P97789 3110056K07Rik-202ENSMUST00000136690 1063 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Xrn1P97789 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC18.87■□□□□ 0.61
Xrn1P97789 Gm18393-201ENSMUST00000208349 1131 ntBASIC18.87■□□□□ 0.61
Xrn1P97789 AC165260.3-202ENSMUST00000224550 1031 ntBASIC18.87■□□□□ 0.61
Xrn1P97789 AC167013.1-201ENSMUST00000228592 202 ntBASIC18.87■□□□□ 0.61
Xrn1P97789 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC18.87■□□□□ 0.61
Xrn1P97789 Pard3-219ENSMUST00000162309 5659 ntAPPRIS P3 TSL 1 (best) BASIC18.87■□□□□ 0.61
Xrn1P97789 Sirt4-201ENSMUST00000112066 1794 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Xrn1P97789 Gm17089-201ENSMUST00000171098 1394 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Xrn1P97789 6030466F02Rik-201ENSMUST00000212339 1434 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Xrn1P97789 Snx10-201ENSMUST00000049152 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Xrn1P97789 Dhcr24-201ENSMUST00000047973 4028 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
Xrn1P97789 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
Xrn1P97789 Pigh-201ENSMUST00000072154 2339 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Xrn1P97789 Snx27-202ENSMUST00000107283 3531 ntAPPRIS P4 TSL 1 (best) BASIC18.86■□□□□ 0.61
Xrn1P97789 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Xrn1P97789 Repin1-207ENSMUST00000163452 2959 ntAPPRIS P3 TSL 1 (best) BASIC18.86■□□□□ 0.61
Xrn1P97789 Asic4-201ENSMUST00000037708 2464 ntAPPRIS P2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Xrn1P97789 Npas3-204ENSMUST00000223358 3143 ntAPPRIS ALT2 TSL 1 (best) BASIC18.86■□□□□ 0.61
Xrn1P97789 Cela2a-201ENSMUST00000102481 1070 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Xrn1P97789 Acyp1-204ENSMUST00000121930 634 ntTSL 2 BASIC18.86■□□□□ 0.61
Xrn1P97789 Gm17227-202ENSMUST00000170286 1016 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Xrn1P97789 Pmvk-203ENSMUST00000184515 1156 ntTSL 1 (best) BASIC18.86■□□□□ 0.61
Xrn1P97789 Mir7032-201ENSMUST00000185154 79 ntBASIC18.86■□□□□ 0.61
Xrn1P97789 Gm26953-204ENSMUST00000212526 553 ntTSL 5 BASIC18.86■□□□□ 0.61
Xrn1P97789 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC18.86■□□□□ 0.61
Xrn1P97789 Batf2-201ENSMUST00000045042 1391 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Xrn1P97789 Gm10787-201ENSMUST00000099552 1548 ntTSL 2 BASIC18.86■□□□□ 0.61
Xrn1P97789 Afg3l2-201ENSMUST00000025408 3085 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Xrn1P97789 Txndc2-201ENSMUST00000050236 1899 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Xrn1P97789 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Xrn1P97789 Slc26a4-201ENSMUST00000001253 3075 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Xrn1P97789 Sohlh2-201ENSMUST00000029369 2364 ntAPPRIS P1 TSL 1 (best) BASIC18.86■□□□□ 0.61
Xrn1P97789 Cbfa2t2-ps1-201ENSMUST00000117165 730 ntBASIC18.86■□□□□ 0.61
Xrn1P97789 Gm5523-201ENSMUST00000180415 997 ntBASIC18.86■□□□□ 0.61
Xrn1P97789 AC154680.1-201ENSMUST00000224376 859 ntBASIC18.86■□□□□ 0.61
Xrn1P97789 AC125209.1-201ENSMUST00000225812 766 ntBASIC18.86■□□□□ 0.61
Xrn1P97789 CT025694.1-201ENSMUST00000226188 934 ntBASIC18.86■□□□□ 0.61
Xrn1P97789 Dppa4-201ENSMUST00000050705 1378 ntAPPRIS ALT2 TSL 5 BASIC18.85■□□□□ 0.61
Xrn1P97789 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Xrn1P97789 Edem3-204ENSMUST00000191070 3127 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Xrn1P97789 Garem1-201ENSMUST00000049260 4923 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Xrn1P97789 Tmem254a-204ENSMUST00000185006 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Xrn1P97789 Tubgcp4-203ENSMUST00000110658 4250 ntAPPRIS ALT1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Xrn1P97789 Gm28182-201ENSMUST00000188354 2477 ntBASIC18.85■□□□□ 0.61
Xrn1P97789 Fgf5-201ENSMUST00000031280 2501 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Xrn1P97789 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Xrn1P97789 Togaram2-205ENSMUST00000153445 3302 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Xrn1P97789 Gm13124-201ENSMUST00000105748 1221 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Xrn1P97789 Znrf3-201ENSMUST00000109867 6311 ntAPPRIS P3 TSL 5 BASIC18.85■□□□□ 0.61
Xrn1P97789 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC18.85■□□□□ 0.61
Xrn1P97789 Anxa4-201ENSMUST00000001187 2002 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Xrn1P97789 Gm14832-201ENSMUST00000121289 322 ntBASIC18.85■□□□□ 0.61
Xrn1P97789 Dlx1as-202ENSMUST00000137251 647 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Xrn1P97789 Gm26361-201ENSMUST00000158868 186 ntBASIC18.85■□□□□ 0.61
Xrn1P97789 Dusp26-203ENSMUST00000161713 1524 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Xrn1P97789 H2-Ob-202ENSMUST00000167280 1878 ntTSL 1 (best) BASIC18.85■□□□□ 0.61
Xrn1P97789 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC18.85■□□□□ 0.61
Xrn1P97789 Gm28982-201ENSMUST00000186895 512 ntTSL 3 BASIC18.85■□□□□ 0.61
Xrn1P97789 Gm43298-201ENSMUST00000200887 866 ntTSL 3 BASIC18.85■□□□□ 0.61
Xrn1P97789 Gm44126-201ENSMUST00000204831 514 ntBASIC18.85■□□□□ 0.61
Xrn1P97789 Gm8285-201ENSMUST00000208293 759 ntBASIC18.85■□□□□ 0.61
Xrn1P97789 1700023F06Rik-201ENSMUST00000021323 1199 ntAPPRIS P2 TSL 5 BASIC18.85■□□□□ 0.61
Xrn1P97789 AC126444.1-201ENSMUST00000225938 1768 ntBASIC18.85■□□□□ 0.61
Xrn1P97789 Mindy3-201ENSMUST00000028105 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Xrn1P97789 Dgkz-201ENSMUST00000028667 3584 ntAPPRIS P2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Xrn1P97789 C1qb-201ENSMUST00000046384 1088 ntAPPRIS P1 TSL 1 (best) BASIC18.85■□□□□ 0.61
Xrn1P97789 Krtap19-1-201ENSMUST00000081334 493 ntAPPRIS P1 BASIC18.85■□□□□ 0.61
Xrn1P97789 Cobll1-205ENSMUST00000112431 5024 ntAPPRIS ALT2 TSL 1 (best) BASIC18.85■□□□□ 0.61
Xrn1P97789 Sema3b-204ENSMUST00000102531 2958 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Xrn1P97789 Sarm1-202ENSMUST00000108287 4868 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Xrn1P97789 Osm-201ENSMUST00000075221 2272 ntAPPRIS P1 TSL 1 (best) BASIC18.84■□□□□ 0.61
Xrn1P97789 Gcdh-202ENSMUST00000109745 2114 ntAPPRIS ALT2 TSL 5 BASIC18.84■□□□□ 0.61
Xrn1P97789 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC18.84■□□□□ 0.61
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms