Protein–RNA interactions for Protein: P97503

Nkx3-2, Homeobox protein Nkx-3.2, mousemouse

Predictions only

Length 333 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nkx3-2P97503 Gm12626-201ENSMUST00000117339 1983 ntBASIC12.87□□□□□ -0.35
Nkx3-2P97503 Gm12623-201ENSMUST00000119849 1983 ntBASIC12.87□□□□□ -0.35
Nkx3-2P97503 Acp5-202ENSMUST00000115315 1349 ntAPPRIS P1 TSL 2 BASIC12.87□□□□□ -0.35
Nkx3-2P97503 Lrrc29-203ENSMUST00000210412 2304 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
Nkx3-2P97503 Tshz2-202ENSMUST00000109159 4314 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
Nkx3-2P97503 Ak1-201ENSMUST00000068271 2034 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx3-2P97503 Rasl12-202ENSMUST00000165682 1903 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx3-2P97503 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Nkx3-2P97503 Slc5a2-202ENSMUST00000118169 2277 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx3-2P97503 Pigg-201ENSMUST00000031189 3427 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
Nkx3-2P97503 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
Nkx3-2P97503 Steap2-201ENSMUST00000015797 3657 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx3-2P97503 Scyl3-207ENSMUST00000170359 4288 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Nkx3-2P97503 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC12.86□□□□□ -0.35
Nkx3-2P97503 Gm11524-201ENSMUST00000119349 807 ntBASIC12.86□□□□□ -0.35
Nkx3-2P97503 1700016P03Rik-201ENSMUST00000134252 863 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx3-2P97503 Ucma-204ENSMUST00000167607 785 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx3-2P97503 Gm45059-201ENSMUST00000205558 1077 ntBASIC12.86□□□□□ -0.35
Nkx3-2P97503 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
Nkx3-2P97503 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx3-2P97503 CT030657.3-201ENSMUST00000222707 1200 ntBASIC12.86□□□□□ -0.35
Nkx3-2P97503 Tada3-203ENSMUST00000099118 1282 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx3-2P97503 Aire-207ENSMUST00000140636 1615 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx3-2P97503 Gm38037-201ENSMUST00000192600 1624 ntBASIC12.86□□□□□ -0.35
Nkx3-2P97503 Pja1-201ENSMUST00000036354 2563 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx3-2P97503 Zfp367-201ENSMUST00000059817 3532 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx3-2P97503 Cfap99-201ENSMUST00000207754 2123 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
Nkx3-2P97503 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.86□□□□□ -0.35
Nkx3-2P97503 Casp7-201ENSMUST00000026062 2350 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx3-2P97503 Jakmip1-201ENSMUST00000043794 2383 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx3-2P97503 Zfp385b-203ENSMUST00000111830 2642 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx3-2P97503 Usp19-201ENSMUST00000006854 4791 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx3-2P97503 Mecp2-203ENSMUST00000123362 1675 ntTSL 5 BASIC12.86□□□□□ -0.35
Nkx3-2P97503 Ap4e1-203ENSMUST00000110394 2271 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx3-2P97503 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx3-2P97503 Ate1-201ENSMUST00000033139 4735 ntAPPRIS P4 TSL 1 (best) BASIC12.86□□□□□ -0.35
Nkx3-2P97503 Trim15-201ENSMUST00000025329 1843 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx3-2P97503 Fam46a-201ENSMUST00000034802 5479 ntAPPRIS P3 TSL 3 BASIC12.85□□□□□ -0.35
Nkx3-2P97503 Nfatc1-202ENSMUST00000078049 4607 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx3-2P97503 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.85□□□□□ -0.35
Nkx3-2P97503 Ckmt2-201ENSMUST00000022122 1486 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx3-2P97503 Tgm6-201ENSMUST00000028888 3327 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx3-2P97503 Hp1bp3-202ENSMUST00000097836 3113 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx3-2P97503 Gm38577-201ENSMUST00000221531 4545 ntBASIC12.85□□□□□ -0.35
Nkx3-2P97503 Aff2-201ENSMUST00000033532 4523 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx3-2P97503 P2ry2-201ENSMUST00000037540 3011 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx3-2P97503 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx3-2P97503 Sall4-202ENSMUST00000075044 2534 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx3-2P97503 Tmem131l-202ENSMUST00000191758 5555 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx3-2P97503 Ggt6-203ENSMUST00000108499 874 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx3-2P97503 Gm15678-201ENSMUST00000117573 960 ntBASIC12.85□□□□□ -0.35
Nkx3-2P97503 4930412M03Rik-201ENSMUST00000130746 1111 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx3-2P97503 Gm15755-201ENSMUST00000133698 659 ntTSL 3 BASIC12.85□□□□□ -0.35
Nkx3-2P97503 Haglr-202ENSMUST00000152462 443 ntTSL 2 BASIC12.85□□□□□ -0.35
Nkx3-2P97503 Lrcol1-202ENSMUST00000185691 764 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx3-2P97503 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.85□□□□□ -0.35
Nkx3-2P97503 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx3-2P97503 1700011B04Rik-206ENSMUST00000221013 824 ntTSL 5 BASIC12.85□□□□□ -0.35
Nkx3-2P97503 Med10-204ENSMUST00000221893 815 ntTSL 2 BASIC12.85□□□□□ -0.35
Nkx3-2P97503 Ngf-201ENSMUST00000035952 904 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Nkx3-2P97503 Wdr74-201ENSMUST00000049424 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx3-2P97503 Upk3bl-201ENSMUST00000006303 1045 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx3-2P97503 AC115735.4-201ENSMUST00000227460 1944 ntBASIC12.85□□□□□ -0.35
Nkx3-2P97503 Spag1-201ENSMUST00000047348 3646 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx3-2P97503 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx3-2P97503 Zfp365-201ENSMUST00000064656 4259 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx3-2P97503 Cplx2-201ENSMUST00000026985 4928 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
Nkx3-2P97503 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx3-2P97503 Clic6-201ENSMUST00000023670 3758 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx3-2P97503 Abr-205ENSMUST00000108408 3534 ntTSL 5 BASIC12.85□□□□□ -0.35
Nkx3-2P97503 Tmc8-202ENSMUST00000106334 2644 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx3-2P97503 Gm37844-201ENSMUST00000192473 4097 ntBASIC12.85□□□□□ -0.35
Nkx3-2P97503 Myo19-202ENSMUST00000093969 4091 ntAPPRIS P1 TSL 5 BASIC12.85□□□□□ -0.35
Nkx3-2P97503 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC12.85□□□□□ -0.35
Nkx3-2P97503 Tnk2-201ENSMUST00000115120 2794 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx3-2P97503 Abcg4-208ENSMUST00000161354 3999 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx3-2P97503 Lrrc56-202ENSMUST00000070458 2502 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx3-2P97503 Rbak-201ENSMUST00000049861 3335 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx3-2P97503 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx3-2P97503 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
Nkx3-2P97503 Bcl11b-201ENSMUST00000066060 8111 ntAPPRIS P4 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx3-2P97503 9130008F23Rik-201ENSMUST00000068258 2159 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx3-2P97503 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx3-2P97503 Ankrd6-202ENSMUST00000084748 4354 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Nkx3-2P97503 Prkcq-201ENSMUST00000028118 3583 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx3-2P97503 Slc6a7-201ENSMUST00000025520 3342 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx3-2P97503 Tmtc3-202ENSMUST00000099318 2794 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx3-2P97503 Ugt1a8-201ENSMUST00000113139 2227 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Nkx3-2P97503 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx3-2P97503 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Nkx3-2P97503 Shf-202ENSMUST00000110530 910 ntAPPRIS ALT2 TSL 5 BASIC12.84□□□□□ -0.35
Nkx3-2P97503 Kxd1-204ENSMUST00000121623 884 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
Nkx3-2P97503 H2afb1-201ENSMUST00000122446 348 ntAPPRIS P1 BASIC12.84□□□□□ -0.35
Nkx3-2P97503 Gm16175-201ENSMUST00000128181 248 ntTSL 3 BASIC12.84□□□□□ -0.35
Nkx3-2P97503 Tmem80-205ENSMUST00000132061 667 ntAPPRIS P1 TSL 3 BASIC12.84□□□□□ -0.35
Nkx3-2P97503 Dtnb-223ENSMUST00000174547 2112 ntTSL 5 BASIC12.84□□□□□ -0.35
Nkx3-2P97503 Asb1-205ENSMUST00000188081 1272 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx3-2P97503 Asb1-206ENSMUST00000188879 1299 ntTSL 1 (best) BASIC12.84□□□□□ -0.35
Nkx3-2P97503 Mpv17-209ENSMUST00000202241 903 ntAPPRIS ALT1 TSL 3 BASIC12.84□□□□□ -0.35
Nkx3-2P97503 AC159006.1-201ENSMUST00000226396 258 ntBASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 40.4 ms