Protein–RNA interactions for Protein: P55271

Cdkn2b, Cyclin-dependent kinase 4 inhibitor B, mousemouse

Predictions only

Length 130 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdkn2bP55271 Inip-202ENSMUST00000107526 1438 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Cdkn2bP55271 Gcsh-201ENSMUST00000040484 1443 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdkn2bP55271 Zbtb33-201ENSMUST00000049740 5122 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdkn2bP55271 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdkn2bP55271 Uhrf1bp1l-201ENSMUST00000020112 6448 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdkn2bP55271 Kctd11-201ENSMUST00000050555 3146 ntAPPRIS P1 BASIC13.04□□□□□ -0.32
Cdkn2bP55271 Grin3a-201ENSMUST00000076674 7431 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Cdkn2bP55271 Grin3a-202ENSMUST00000093859 7491 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cdkn2bP55271 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC13.03□□□□□ -0.32
Cdkn2bP55271 2610507B11Rik-201ENSMUST00000010421 7443 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdkn2bP55271 Iqcm-203ENSMUST00000212704 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdkn2bP55271 Rnf224-201ENSMUST00000091318 2021 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdkn2bP55271 Plin3-201ENSMUST00000019726 2159 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdkn2bP55271 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC13.03□□□□□ -0.32
Cdkn2bP55271 1810032O08Rik-206ENSMUST00000144049 966 ntAPPRIS P5 TSL 2 BASIC13.03□□□□□ -0.32
Cdkn2bP55271 1700021F05Rik-202ENSMUST00000147196 860 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdkn2bP55271 Gm24158-201ENSMUST00000175263 71 ntBASIC13.03□□□□□ -0.32
Cdkn2bP55271 Ighv8-8-201ENSMUST00000192591 358 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Cdkn2bP55271 Gm42560-201ENSMUST00000201216 1023 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cdkn2bP55271 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC13.03□□□□□ -0.32
Cdkn2bP55271 Shd-206ENSMUST00000225145 998 ntBASIC13.03□□□□□ -0.32
Cdkn2bP55271 Chchd10-201ENSMUST00000058906 939 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdkn2bP55271 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.03□□□□□ -0.32
Cdkn2bP55271 Secisbp2-201ENSMUST00000040117 3328 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdkn2bP55271 Azi2-201ENSMUST00000044454 3396 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdkn2bP55271 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdkn2bP55271 Gatd1-201ENSMUST00000106008 1898 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdkn2bP55271 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdkn2bP55271 C130026L21Rik-201ENSMUST00000064930 2472 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cdkn2bP55271 Map1lc3b-201ENSMUST00000034270 2532 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdkn2bP55271 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC13.03□□□□□ -0.32
Cdkn2bP55271 Rcbtb2-202ENSMUST00000110952 2176 ntAPPRIS P2 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdkn2bP55271 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC13.03□□□□□ -0.32
Cdkn2bP55271 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdkn2bP55271 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdkn2bP55271 Tbc1d22a-201ENSMUST00000063414 3229 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdkn2bP55271 Hif1a-201ENSMUST00000021530 4724 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdkn2bP55271 Mfsd14b-201ENSMUST00000054730 3251 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.32
Cdkn2bP55271 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.02□□□□□ -0.32
Cdkn2bP55271 Slc16a3-208ENSMUST00000168579 4335 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdkn2bP55271 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC13.02□□□□□ -0.32
Cdkn2bP55271 5730409E04Rik-202ENSMUST00000164362 2855 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Cdkn2bP55271 Tcf4-210ENSMUST00000128706 2066 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdkn2bP55271 Sptb-201ENSMUST00000021458 10394 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdkn2bP55271 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdkn2bP55271 Tnni1-205ENSMUST00000148201 1150 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Cdkn2bP55271 A230065H16Rik-201ENSMUST00000150384 670 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdkn2bP55271 Tnni1-206ENSMUST00000152075 1038 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Cdkn2bP55271 Tnni1-207ENSMUST00000152208 1105 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Cdkn2bP55271 Hsf4-207ENSMUST00000174837 1251 ntTSL 5 BASIC13.02□□□□□ -0.33
Cdkn2bP55271 Gm42787-201ENSMUST00000200879 1164 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdkn2bP55271 Pym1-203ENSMUST00000218218 1143 ntTSL 3 BASIC13.02□□□□□ -0.33
Cdkn2bP55271 Gm33337-201ENSMUST00000219594 228 ntTSL 3 BASIC13.02□□□□□ -0.33
Cdkn2bP55271 Gm9229-201ENSMUST00000222777 126 ntBASIC13.02□□□□□ -0.33
Cdkn2bP55271 Anapc15-202ENSMUST00000035395 836 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdkn2bP55271 Gm3695-201ENSMUST00000087222 1009 ntBASIC13.02□□□□□ -0.33
Cdkn2bP55271 Rec114-201ENSMUST00000098674 883 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdkn2bP55271 Adarb1-201ENSMUST00000020496 6549 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdkn2bP55271 Klhl15-201ENSMUST00000096369 3944 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdkn2bP55271 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC13.02□□□□□ -0.33
Cdkn2bP55271 Mier3-203ENSMUST00000109272 5279 ntAPPRIS P2 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdkn2bP55271 Alox12e-201ENSMUST00000019051 2422 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdkn2bP55271 Dcun1d3-203ENSMUST00000106519 1475 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Cdkn2bP55271 Rnf152-201ENSMUST00000058688 8492 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdkn2bP55271 Cd81-201ENSMUST00000037941 1533 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdkn2bP55271 Ptn-202ENSMUST00000201321 2558 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdkn2bP55271 Dnmt3l-208ENSMUST00000151242 1657 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdkn2bP55271 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC13.02□□□□□ -0.33
Cdkn2bP55271 Ccnh-204ENSMUST00000164127 1718 ntTSL 1 (best) BASIC13.02□□□□□ -0.33
Cdkn2bP55271 Sh3bp2-207ENSMUST00000179943 2935 ntAPPRIS P3 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdkn2bP55271 Ces2f-201ENSMUST00000076384 1823 ntAPPRIS P1 TSL 1 (best) BASIC13.02□□□□□ -0.33
Cdkn2bP55271 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC13.02□□□□□ -0.33
Cdkn2bP55271 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdkn2bP55271 Specc1-202ENSMUST00000092415 6797 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cdkn2bP55271 Prkca-202ENSMUST00000100302 2265 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdkn2bP55271 Atg7-207ENSMUST00000182428 2264 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cdkn2bP55271 Kcnq2-208ENSMUST00000103051 4200 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cdkn2bP55271 Srebf2-201ENSMUST00000023100 4989 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdkn2bP55271 Mau2-202ENSMUST00000168013 5323 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cdkn2bP55271 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdkn2bP55271 Polrmt-202ENSMUST00000159016 3535 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdkn2bP55271 Metrnl-202ENSMUST00000106089 1101 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cdkn2bP55271 Cnbp-202ENSMUST00000113617 952 ntTSL 5 BASIC13.01□□□□□ -0.33
Cdkn2bP55271 Gm15693-201ENSMUST00000120470 637 ntBASIC13.01□□□□□ -0.33
Cdkn2bP55271 E130201H02Rik-201ENSMUST00000123576 851 ntBASIC13.01□□□□□ -0.33
Cdkn2bP55271 Gm11505-201ENSMUST00000130442 737 ntTSL 3 BASIC13.01□□□□□ -0.33
Cdkn2bP55271 Khdc3-202ENSMUST00000167514 1251 ntAPPRIS ALT2 TSL 5 BASIC13.01□□□□□ -0.33
Cdkn2bP55271 Bcl2l2-204ENSMUST00000172844 498 ntTSL 5 BASIC13.01□□□□□ -0.33
Cdkn2bP55271 Gm4804-201ENSMUST00000182234 999 ntBASIC13.01□□□□□ -0.33
Cdkn2bP55271 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC13.01□□□□□ -0.33
Cdkn2bP55271 Gm5779-201ENSMUST00000218467 910 ntBASIC13.01□□□□□ -0.33
Cdkn2bP55271 Gm10044-201ENSMUST00000081331 1312 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdkn2bP55271 Ilkap-201ENSMUST00000027534 1368 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdkn2bP55271 Gm13859-201ENSMUST00000119936 1423 ntBASIC13.01□□□□□ -0.33
Cdkn2bP55271 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdkn2bP55271 2600006K01Rik-201ENSMUST00000047607 1406 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Cdkn2bP55271 Socs5-201ENSMUST00000041369 4392 ntAPPRIS P1 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdkn2bP55271 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC13.01□□□□□ -0.33
Cdkn2bP55271 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC13.01□□□□□ -0.33
Cdkn2bP55271 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC13.01□□□□□ -0.33
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms