Protein–RNA interactions for Protein: P51448

Rora, Nuclear receptor ROR-alpha, mousemouse

Predictions only

Length 523 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RoraP51448 Clps-201ENSMUST00000025062 550 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RoraP51448 Cby3-201ENSMUST00000052596 703 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RoraP51448 Stx5a-202ENSMUST00000073430 2112 ntAPPRIS P2 TSL 1 (best) BASIC12.87□□□□□ -0.35
RoraP51448 Nfxl1-202ENSMUST00000087216 3712 ntAPPRIS P1 TSL 5 BASIC12.87□□□□□ -0.35
RoraP51448 Zc3h13-201ENSMUST00000022577 6151 ntAPPRIS P2 TSL 5 BASIC12.87□□□□□ -0.35
RoraP51448 Lpar1-201ENSMUST00000055018 3512 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
RoraP51448 Palm-201ENSMUST00000046945 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RoraP51448 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
RoraP51448 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC12.87□□□□□ -0.35
RoraP51448 Pprc1-202ENSMUST00000099392 3956 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RoraP51448 Gm26513-201ENSMUST00000181802 2489 ntBASIC12.87□□□□□ -0.35
RoraP51448 Krt71-201ENSMUST00000023710 2185 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RoraP51448 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RoraP51448 Pctp-201ENSMUST00000020864 2723 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RoraP51448 Fubp1-206ENSMUST00000196739 2526 ntAPPRIS ALT2 TSL 1 (best) BASIC12.87□□□□□ -0.35
RoraP51448 Camk2d-206ENSMUST00000106402 4180 ntTSL 1 (best) BASIC12.87□□□□□ -0.35
RoraP51448 Adcyap1r1-208ENSMUST00000172084 1344 ntAPPRIS ALT2 TSL 5 BASIC12.87□□□□□ -0.35
RoraP51448 4933415J04Rik-201ENSMUST00000195895 1301 ntBASIC12.87□□□□□ -0.35
RoraP51448 Adamts16-201ENSMUST00000080145 4981 ntAPPRIS P1 TSL 1 (best) BASIC12.87□□□□□ -0.35
RoraP51448 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RoraP51448 Serpinh1-201ENSMUST00000094154 2215 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RoraP51448 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RoraP51448 Gpr137c-201ENSMUST00000146150 3917 ntAPPRIS P2 TSL 5 BASIC12.86□□□□□ -0.35
RoraP51448 Fbxl19-203ENSMUST00000186207 3178 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RoraP51448 Epb41-208ENSMUST00000105981 5303 ntAPPRIS P3 TSL 5 BASIC12.86□□□□□ -0.35
RoraP51448 Nxf1-202ENSMUST00000010248 748 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RoraP51448 Gm12928-201ENSMUST00000117115 573 ntBASIC12.86□□□□□ -0.35
RoraP51448 Tmem219-202ENSMUST00000119781 1118 ntTSL 5 BASIC12.86□□□□□ -0.35
RoraP51448 Gm16342-201ENSMUST00000124025 1025 ntBASIC12.86□□□□□ -0.35
RoraP51448 Rpl13a-201ENSMUST00000150350 1047 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RoraP51448 Rps19-ps13-201ENSMUST00000180504 441 ntBASIC12.86□□□□□ -0.35
RoraP51448 Gm2445-201ENSMUST00000182798 989 ntBASIC12.86□□□□□ -0.35
RoraP51448 Gm5069-202ENSMUST00000192714 1011 ntBASIC12.86□□□□□ -0.35
RoraP51448 Gm7287-201ENSMUST00000205267 602 ntBASIC12.86□□□□□ -0.35
RoraP51448 1700018B08Rik-201ENSMUST00000034265 1084 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RoraP51448 Alkbh7-202ENSMUST00000074141 736 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RoraP51448 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RoraP51448 Tmem55a-201ENSMUST00000029875 2339 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RoraP51448 Syt8-204ENSMUST00000118276 1503 ntAPPRIS P3 TSL 1 (best) BASIC12.86□□□□□ -0.35
RoraP51448 Kdm4b-201ENSMUST00000025036 4577 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RoraP51448 Madd-201ENSMUST00000066420 3753 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
RoraP51448 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC12.86□□□□□ -0.35
RoraP51448 Mrap2-202ENSMUST00000113149 2112 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
RoraP51448 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RoraP51448 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RoraP51448 Tspyl1-201ENSMUST00000061372 3086 ntAPPRIS P1 BASIC12.86□□□□□ -0.35
RoraP51448 Ntrk2-208ENSMUST00000225583 2719 ntBASIC12.86□□□□□ -0.35
RoraP51448 Megf6-201ENSMUST00000030897 6851 ntAPPRIS P1 TSL 5 BASIC12.86□□□□□ -0.35
RoraP51448 Gm10371-201ENSMUST00000127429 1411 ntTSL 2 BASIC12.86□□□□□ -0.35
RoraP51448 A930033H14Rik-201ENSMUST00000170048 2969 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RoraP51448 Sgce-203ENSMUST00000101677 1656 ntTSL 1 (best) BASIC12.86□□□□□ -0.35
RoraP51448 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RoraP51448 Pramel1-201ENSMUST00000037419 2794 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RoraP51448 Lgals8-202ENSMUST00000099821 2792 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RoraP51448 Trim27-201ENSMUST00000021761 4204 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RoraP51448 Maged2-203ENSMUST00000112699 2183 ntAPPRIS P1 TSL 1 (best) BASIC12.86□□□□□ -0.35
RoraP51448 Galt-201ENSMUST00000084695 1595 ntAPPRIS P2 TSL 1 (best) BASIC12.86□□□□□ -0.35
RoraP51448 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RoraP51448 Klc2-203ENSMUST00000113728 2838 ntTSL 5 BASIC12.85□□□□□ -0.35
RoraP51448 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RoraP51448 Gm12020-201ENSMUST00000119030 2042 ntBASIC12.85□□□□□ -0.35
RoraP51448 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RoraP51448 Lcn5-203ENSMUST00000100313 660 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RoraP51448 Gm4984-201ENSMUST00000115987 360 ntBASIC12.85□□□□□ -0.35
RoraP51448 Gm5303-201ENSMUST00000117943 1252 ntBASIC12.85□□□□□ -0.35
RoraP51448 Nat8f4-202ENSMUST00000159755 1129 ntTSL 2 BASIC12.85□□□□□ -0.35
RoraP51448 Commd6-203ENSMUST00000168587 519 ntAPPRIS ALT2 TSL 1 (best) BASIC12.85□□□□□ -0.35
RoraP51448 Fam24a-203ENSMUST00000207784 600 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RoraP51448 Cks1b-201ENSMUST00000029679 849 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RoraP51448 Mrps17-201ENSMUST00000042191 832 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RoraP51448 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RoraP51448 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RoraP51448 Tsku-206ENSMUST00000179780 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RoraP51448 Popdc2-201ENSMUST00000023494 2169 ntAPPRIS P4 TSL 1 (best) BASIC12.85□□□□□ -0.35
RoraP51448 Rbbp8nl-201ENSMUST00000038529 2319 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RoraP51448 Fgd6-201ENSMUST00000020208 8044 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RoraP51448 Apol7a-201ENSMUST00000010745 1431 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RoraP51448 Parp10-202ENSMUST00000165738 3367 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RoraP51448 Zkscan7-202ENSMUST00000215872 4035 ntTSL 5 BASIC12.85□□□□□ -0.35
RoraP51448 AL645783.1-201ENSMUST00000221416 1832 ntBASIC12.85□□□□□ -0.35
RoraP51448 Vangl1-201ENSMUST00000029453 6531 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RoraP51448 Mpped1-203ENSMUST00000109470 3281 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RoraP51448 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RoraP51448 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RoraP51448 Adal-204ENSMUST00000110665 2356 ntTSL 1 (best) BASIC12.85□□□□□ -0.35
RoraP51448 Gm8775-201ENSMUST00000170943 1327 ntBASIC12.85□□□□□ -0.35
RoraP51448 Zfp57-211ENSMUST00000174524 1747 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
RoraP51448 Tcf4-258ENSMUST00000202937 2103 ntTSL 5 BASIC12.85□□□□□ -0.35
RoraP51448 Kcnk16-202ENSMUST00000225596 2127 ntBASIC12.85□□□□□ -0.35
RoraP51448 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.85□□□□□ -0.35
RoraP51448 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC12.85□□□□□ -0.35
RoraP51448 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC12.85□□□□□ -0.35
RoraP51448 Rtkn-202ENSMUST00000087938 3080 ntAPPRIS P3 TSL 1 (best) BASIC12.85□□□□□ -0.35
RoraP51448 Amdhd2-201ENSMUST00000040735 1496 ntAPPRIS P1 TSL 1 (best) BASIC12.85□□□□□ -0.35
RoraP51448 Eml6-201ENSMUST00000058902 8083 ntAPPRIS P1 TSL 5 BASIC12.84□□□□□ -0.35
RoraP51448 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RoraP51448 As3mt-201ENSMUST00000003655 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RoraP51448 Atp13a2-201ENSMUST00000037055 3956 ntAPPRIS P3 TSL 1 (best) BASIC12.84□□□□□ -0.35
RoraP51448 Fam71f1-204ENSMUST00000166462 1363 ntAPPRIS ALT1 TSL 1 (best) BASIC12.84□□□□□ -0.35
RoraP51448 Gm9947-201ENSMUST00000067599 2920 ntBASIC12.84□□□□□ -0.35
Retrieved 100 of 76,532 protein–RNA pairs in 33.3 ms