Protein–RNA interactions for Protein: P43275

Hist1h1a, Histone H1.1, mousemouse

Predictions only

Length 213 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Hist1h1aP43275 Olfr160-203ENSMUST00000215727 1667 ntAPPRIS P1 TSL 5 BASIC11.23□□□□□ -0.61
Hist1h1aP43275 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1aP43275 Muc6-202ENSMUST00000189314 5087 ntAPPRIS ALT2 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1aP43275 Gm26788-201ENSMUST00000181692 1750 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1aP43275 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1aP43275 Mypn-202ENSMUST00000218978 1833 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1aP43275 Ankrd34b-201ENSMUST00000061594 4013 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1aP43275 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1aP43275 Klhl18-201ENSMUST00000068025 4530 ntAPPRIS P1 TSL 1 (best) BASIC11.23□□□□□ -0.61
Hist1h1aP43275 Reep3-201ENSMUST00000020023 5430 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h1aP43275 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h1aP43275 Klhl26-203ENSMUST00000209415 2919 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h1aP43275 Samd7-201ENSMUST00000108262 3144 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Hist1h1aP43275 Bap1-201ENSMUST00000022458 3460 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h1aP43275 Espn-213ENSMUST00000105659 3595 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Hist1h1aP43275 Nkain3-201ENSMUST00000102998 3098 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h1aP43275 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC11.22□□□□□ -0.61
Hist1h1aP43275 Hipk4-202ENSMUST00000108353 2409 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h1aP43275 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h1aP43275 Pus7-201ENSMUST00000119946 3407 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h1aP43275 Mir1895-201ENSMUST00000122615 79 ntBASIC11.22□□□□□ -0.61
Hist1h1aP43275 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h1aP43275 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC11.22□□□□□ -0.61
Hist1h1aP43275 Fam172a-203ENSMUST00000163257 1436 ntAPPRIS P4 TSL 5 BASIC11.22□□□□□ -0.61
Hist1h1aP43275 Mpped1-210ENSMUST00000172115 795 ntTSL 3 BASIC11.22□□□□□ -0.61
Hist1h1aP43275 Mpped1-211ENSMUST00000172398 795 ntTSL 3 BASIC11.22□□□□□ -0.61
Hist1h1aP43275 Gm18889-201ENSMUST00000174284 929 ntBASIC11.22□□□□□ -0.61
Hist1h1aP43275 Gm9824-201ENSMUST00000178707 561 ntBASIC11.22□□□□□ -0.61
Hist1h1aP43275 Gm27164-201ENSMUST00000184359 723 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h1aP43275 Gm8000-201ENSMUST00000188378 592 ntBASIC11.22□□□□□ -0.61
Hist1h1aP43275 Gm5264-201ENSMUST00000190584 848 ntBASIC11.22□□□□□ -0.61
Hist1h1aP43275 4930425O10Rik-201ENSMUST00000197761 1418 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h1aP43275 Zfp524-203ENSMUST00000209030 1128 ntAPPRIS P1 TSL 5 BASIC11.22□□□□□ -0.61
Hist1h1aP43275 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC11.22□□□□□ -0.61
Hist1h1aP43275 Cd3g-201ENSMUST00000002101 1023 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h1aP43275 Gm45453-201ENSMUST00000211758 853 ntBASIC11.22□□□□□ -0.61
Hist1h1aP43275 AC149588.3-201ENSMUST00000227515 150 ntBASIC11.22□□□□□ -0.61
Hist1h1aP43275 Commd9-201ENSMUST00000028584 1191 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h1aP43275 Dph2-201ENSMUST00000030265 2555 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h1aP43275 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h1aP43275 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h1aP43275 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h1aP43275 Dnph1-201ENSMUST00000046497 1106 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h1aP43275 Ifi47-201ENSMUST00000046704 1690 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h1aP43275 Asb10-201ENSMUST00000048302 2327 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h1aP43275 Igfals-201ENSMUST00000050714 2111 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h1aP43275 Zfp57-201ENSMUST00000069250 1749 ntAPPRIS P3 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h1aP43275 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h1aP43275 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h1aP43275 Ercc5-201ENSMUST00000027214 3907 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h1aP43275 Ppp6r1-201ENSMUST00000064099 3862 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h1aP43275 Arl4a-205ENSMUST00000146905 3710 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h1aP43275 Klc2-204ENSMUST00000116563 3169 ntAPPRIS P1 TSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h1aP43275 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC11.22□□□□□ -0.61
Hist1h1aP43275 Setdb2-201ENSMUST00000095775 3034 ntAPPRIS ALT2 TSL 5 BASIC11.22□□□□□ -0.61
Hist1h1aP43275 Ankfn1-201ENSMUST00000050983 2665 ntTSL 1 (best) BASIC11.22□□□□□ -0.61
Hist1h1aP43275 Olfr95-202ENSMUST00000216318 4917 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Hist1h1aP43275 Arhgap11a-203ENSMUST00000110948 4878 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hist1h1aP43275 Micu1-204ENSMUST00000165563 2442 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hist1h1aP43275 Ago1-201ENSMUST00000097888 7227 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hist1h1aP43275 Sema3f-204ENSMUST00000192727 2383 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hist1h1aP43275 Pde4d-205ENSMUST00000119507 2163 ntTSL 5 BASIC11.21□□□□□ -0.61
Hist1h1aP43275 Kmt5b-207ENSMUST00000113974 4150 ntAPPRIS P3 TSL 5 BASIC11.21□□□□□ -0.61
Hist1h1aP43275 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.21□□□□□ -0.61
Hist1h1aP43275 Adck5-207ENSMUST00000160784 1998 ntTSL 5 BASIC11.21□□□□□ -0.61
Hist1h1aP43275 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Hist1h1aP43275 Aldh3b1-201ENSMUST00000051803 1875 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hist1h1aP43275 Gm7114-201ENSMUST00000190159 1789 ntBASIC11.21□□□□□ -0.61
Hist1h1aP43275 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hist1h1aP43275 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Hist1h1aP43275 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC11.21□□□□□ -0.61
Hist1h1aP43275 Tfe3-206ENSMUST00000115679 3239 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Hist1h1aP43275 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Hist1h1aP43275 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
Hist1h1aP43275 Vrtn-201ENSMUST00000095551 3028 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hist1h1aP43275 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hist1h1aP43275 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hist1h1aP43275 Gjb4-202ENSMUST00000106090 1446 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Hist1h1aP43275 Gjb4-201ENSMUST00000060419 1445 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hist1h1aP43275 Efr3a-205ENSMUST00000173858 2848 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Hist1h1aP43275 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Hist1h1aP43275 Fam103a1-202ENSMUST00000118190 1391 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hist1h1aP43275 Rbm20-204ENSMUST00000164202 6592 ntAPPRIS P1 TSL 5 BASIC11.21□□□□□ -0.61
Hist1h1aP43275 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hist1h1aP43275 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Hist1h1aP43275 Gm16091-201ENSMUST00000156664 963 ntTSL 1 (best) BASIC11.21□□□□□ -0.61
Hist1h1aP43275 Banf1-202ENSMUST00000170010 742 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hist1h1aP43275 AC124549.3-201ENSMUST00000225541 367 ntBASIC11.21□□□□□ -0.61
Hist1h1aP43275 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hist1h1aP43275 Oxt-201ENSMUST00000028764 537 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hist1h1aP43275 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hist1h1aP43275 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hist1h1aP43275 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC11.21□□□□□ -0.61
Hist1h1aP43275 Gm15500-202ENSMUST00000071641 1019 ntBASIC11.21□□□□□ -0.61
Hist1h1aP43275 Hist1h2bg-201ENSMUST00000079251 618 ntAPPRIS P1 BASIC11.21□□□□□ -0.61
Hist1h1aP43275 Mir125a-201ENSMUST00000083545 68 ntBASIC11.21□□□□□ -0.61
Hist1h1aP43275 Tmem41b-201ENSMUST00000094097 3840 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hist1h1aP43275 Wisp1-201ENSMUST00000005255 5097 ntAPPRIS P1 TSL 1 (best) BASIC11.21□□□□□ -0.61
Hist1h1aP43275 Mbnl2-204ENSMUST00000227012 2390 ntBASIC11.21□□□□□ -0.62
Hist1h1aP43275 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC11.21□□□□□ -0.62
Retrieved 100 of 76,532 protein–RNA pairs in 39.8 ms