Protein–RNA interactions for Protein: P42859

Htt, Huntingtin, mousemouse

Predictions only

Length 3,119 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HttP42859 Phka2-202ENSMUST00000112376 2310 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HttP42859 Commd1-201ENSMUST00000057843 1459 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HttP42859 Slc3a2-207ENSMUST00000206598 1393 ntTSL 2 BASIC14.09□□□□□ -0.15
HttP42859 Bop1-201ENSMUST00000023217 2476 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HttP42859 Gm11941-201ENSMUST00000119904 610 ntBASIC14.09□□□□□ -0.15
HttP42859 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC14.09□□□□□ -0.15
HttP42859 Fgf5-202ENSMUST00000200059 600 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HttP42859 Gm10312-201ENSMUST00000078515 489 ntBASIC14.09□□□□□ -0.15
HttP42859 Vkorc1l1-203ENSMUST00000201855 4809 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HttP42859 Lsp1-205ENSMUST00000105968 1727 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HttP42859 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HttP42859 Ano8-201ENSMUST00000093450 3653 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HttP42859 Tbk1-201ENSMUST00000020316 3024 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HttP42859 Ralyl-206ENSMUST00000193117 2933 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
HttP42859 Pla2g2f-201ENSMUST00000030526 2465 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HttP42859 Rab39-201ENSMUST00000068449 2971 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HttP42859 Gm17029-202ENSMUST00000146124 2899 ntTSL 1 (best) BASIC14.09□□□□□ -0.15
HttP42859 Oscar-202ENSMUST00000108645 1829 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HttP42859 Oscar-201ENSMUST00000039507 1823 ntAPPRIS P3 TSL 1 (best) BASIC14.09□□□□□ -0.15
HttP42859 Lats2-210ENSMUST00000174694 3287 ntAPPRIS P1 TSL 2 BASIC14.09□□□□□ -0.15
HttP42859 Pfkfb3-205ENSMUST00000114845 1971 ntTSL 5 BASIC14.09□□□□□ -0.15
HttP42859 Slc52a3-204ENSMUST00000109861 2590 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HttP42859 H2-Q3-201ENSMUST00000172583 608 ntBASIC14.09□□□□□ -0.15
HttP42859 Ankrd7-201ENSMUST00000031489 1190 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HttP42859 Sstr2-201ENSMUST00000067591 1041 ntTSL 2 BASIC14.09□□□□□ -0.15
HttP42859 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC14.09□□□□□ -0.15
HttP42859 Rbfox3-201ENSMUST00000017576 3150 ntAPPRIS P4 TSL 1 (best) BASIC14.09□□□□□ -0.15
HttP42859 Wls-205ENSMUST00000198878 2050 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HttP42859 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HttP42859 Zfp109-203ENSMUST00000206960 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC14.09□□□□□ -0.15
HttP42859 Mmp24-201ENSMUST00000029141 4306 ntAPPRIS P1 TSL 1 (best) BASIC14.09□□□□□ -0.15
HttP42859 Ncbp2-201ENSMUST00000023460 2070 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
HttP42859 Lyzl6-202ENSMUST00000107014 802 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.15
HttP42859 Olfr22-ps1-201ENSMUST00000115991 1237 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.15
HttP42859 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC14.08□□□□□ -0.15
HttP42859 Gm36503-201ENSMUST00000204284 875 ntTSL 1 (best) BASIC14.08□□□□□ -0.15
HttP42859 Gm6722-201ENSMUST00000221586 390 ntBASIC14.08□□□□□ -0.15
HttP42859 Olfr76-201ENSMUST00000087822 1048 ntAPPRIS P1 BASIC14.08□□□□□ -0.15
HttP42859 Actg-ps1-201ENSMUST00000099636 1124 ntBASIC14.08□□□□□ -0.15
HttP42859 Dzip3-201ENSMUST00000114516 3331 ntAPPRIS P3 TSL 1 (best) BASIC14.08□□□□□ -0.15
HttP42859 Gm13187-202ENSMUST00000133873 1321 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HttP42859 Slc6a8-203ENSMUST00000114465 3314 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HttP42859 Kcnh4-201ENSMUST00000107361 3748 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
HttP42859 Sirpa-202ENSMUST00000099113 3342 ntTSL 3 BASIC14.08□□□□□ -0.16
HttP42859 Gm14249-201ENSMUST00000156239 1017 ntTSL 5 BASIC14.08□□□□□ -0.16
HttP42859 Tbc1d8-204ENSMUST00000193823 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC14.08□□□□□ -0.16
HttP42859 Gm17889-201ENSMUST00000198410 598 ntBASIC14.08□□□□□ -0.16
HttP42859 AC129219.2-201ENSMUST00000224324 701 ntBASIC14.08□□□□□ -0.16
HttP42859 Smyd5-201ENSMUST00000045693 2486 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HttP42859 Cdc42ep2-201ENSMUST00000055458 1491 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HttP42859 Myo3b-202ENSMUST00000112241 1319 ntTSL 1 (best) BASIC14.08□□□□□ -0.16
HttP42859 Th-201ENSMUST00000000219 1829 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HttP42859 Fam227a-202ENSMUST00000109646 1896 ntTSL 5 BASIC14.08□□□□□ -0.16
HttP42859 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC14.08□□□□□ -0.16
HttP42859 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC14.08□□□□□ -0.16
HttP42859 Mrps17-205ENSMUST00000119985 859 ntAPPRIS P1 TSL 2 BASIC14.08□□□□□ -0.16
HttP42859 Gm12969-201ENSMUST00000120199 1004 ntBASIC14.08□□□□□ -0.16
HttP42859 Gm15432-201ENSMUST00000121106 195 ntBASIC14.08□□□□□ -0.16
HttP42859 Calca-205ENSMUST00000205933 458 ntTSL 3 BASIC14.08□□□□□ -0.16
HttP42859 1110017D15Rik-201ENSMUST00000030152 1114 ntAPPRIS P1 TSL 5 BASIC14.08□□□□□ -0.16
HttP42859 Olfr1230-201ENSMUST00000099787 918 ntAPPRIS P1 BASIC14.08□□□□□ -0.16
HttP42859 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HttP42859 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HttP42859 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC14.08□□□□□ -0.16
HttP42859 Gm9387-201ENSMUST00000098624 1320 ntBASIC14.07□□□□□ -0.16
HttP42859 Zfp566-201ENSMUST00000088785 1709 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HttP42859 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC14.07□□□□□ -0.16
HttP42859 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HttP42859 Adamts3-204ENSMUST00000198151 1833 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HttP42859 Gm14704-201ENSMUST00000120300 874 ntBASIC14.07□□□□□ -0.16
HttP42859 Gm37246-201ENSMUST00000192665 835 ntBASIC14.07□□□□□ -0.16
HttP42859 Gm32633-201ENSMUST00000205726 587 ntTSL 3 BASIC14.07□□□□□ -0.16
HttP42859 AC156501.1-201ENSMUST00000228219 270 ntBASIC14.07□□□□□ -0.16
HttP42859 Ly6i-201ENSMUST00000023250 1156 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HttP42859 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HttP42859 Gm8894-201ENSMUST00000074642 666 ntBASIC14.07□□□□□ -0.16
HttP42859 Gm21811-201ENSMUST00000096485 930 ntBASIC14.07□□□□□ -0.16
HttP42859 Trib1-202ENSMUST00000118228 3081 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HttP42859 Gm9932-201ENSMUST00000194154 2116 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HttP42859 Gm14371-201ENSMUST00000138925 1518 ntBASIC14.07□□□□□ -0.16
HttP42859 Acd-201ENSMUST00000042608 3154 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HttP42859 Ebf3-208ENSMUST00000210774 2994 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HttP42859 Xkr5-202ENSMUST00000095438 2838 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HttP42859 Unc5d-203ENSMUST00000210298 3060 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HttP42859 Dcaf4-201ENSMUST00000021645 2008 ntAPPRIS P2 TSL 5 BASIC14.07□□□□□ -0.16
HttP42859 Fhl4-202ENSMUST00000216889 1860 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HttP42859 Ripk3-201ENSMUST00000022830 1892 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HttP42859 Mir671-201ENSMUST00000102432 98 ntBASIC14.07□□□□□ -0.16
HttP42859 Gm15711-201ENSMUST00000118889 535 ntBASIC14.07□□□□□ -0.16
HttP42859 Mcfd2-205ENSMUST00000145895 751 ntTSL 2 BASIC14.07□□□□□ -0.16
HttP42859 Gm15852-201ENSMUST00000159701 915 ntTSL 1 (best) BASIC14.07□□□□□ -0.16
HttP42859 Gm37201-201ENSMUST00000191845 523 ntBASIC14.07□□□□□ -0.16
HttP42859 Gm32999-201ENSMUST00000192693 562 ntBASIC14.07□□□□□ -0.16
HttP42859 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC14.07□□□□□ -0.16
HttP42859 Arhgef25-201ENSMUST00000019611 2218 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HttP42859 Podn-203ENSMUST00000106709 3170 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HttP42859 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HttP42859 Nkx6-1-201ENSMUST00000044125 3138 ntAPPRIS P1 TSL 1 (best) BASIC14.07□□□□□ -0.16
HttP42859 Syvn1-203ENSMUST00000134667 3159 ntAPPRIS P2 TSL 1 (best) BASIC14.07□□□□□ -0.16
HttP42859 Tssk5-201ENSMUST00000071119 1518 ntAPPRIS P1 TSL 1 (best) BASIC14.06□□□□□ -0.16
Retrieved 100 of 76,532 protein–RNA pairs in 44.1 ms