Protein–RNA interactions for Protein: P39876

Timp3, Metalloproteinase inhibitor 3, mousemouse

Predictions only

Length 211 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Timp3P39876 Enpp1-203ENSMUST00000135846 2721 ntAPPRIS ALT2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Timp3P39876 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC11.17□□□□□ -0.62
Timp3P39876 Keap1-202ENSMUST00000164812 3614 ntAPPRIS P2 TSL 1 (best) BASIC11.17□□□□□ -0.62
Timp3P39876 Pds5b-201ENSMUST00000016569 7417 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Timp3P39876 Gm4780-202ENSMUST00000215200 2644 ntBASIC11.17□□□□□ -0.62
Timp3P39876 Wisp3-201ENSMUST00000076713 1419 ntAPPRIS P1 TSL 5 BASIC11.17□□□□□ -0.62
Timp3P39876 G3bp2-209ENSMUST00000202258 1884 ntAPPRIS P3 TSL 1 (best) BASIC11.17□□□□□ -0.62
Timp3P39876 Nfe2-205ENSMUST00000133600 1605 ntTSL 5 BASIC11.17□□□□□ -0.62
Timp3P39876 Ddx23-201ENSMUST00000003450 3187 ntAPPRIS P1 TSL 5 BASIC11.16□□□□□ -0.62
Timp3P39876 Ube2k-210ENSMUST00000202679 4682 ntTSL 5 BASIC11.16□□□□□ -0.62
Timp3P39876 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Timp3P39876 Plagl1-202ENSMUST00000121646 5260 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Timp3P39876 Nsd3-211ENSMUST00000155861 2834 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Timp3P39876 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Timp3P39876 Cfap157-201ENSMUST00000102813 1730 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Timp3P39876 Il11-201ENSMUST00000094892 1949 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Timp3P39876 Pcdhgb8-202ENSMUST00000208907 2796 ntAPPRIS P2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Timp3P39876 Mul1-203ENSMUST00000105815 473 ntTSL 3 BASIC11.16□□□□□ -0.62
Timp3P39876 Pop7-202ENSMUST00000111035 988 ntAPPRIS P1 BASIC11.16□□□□□ -0.62
Timp3P39876 Snrnp27-202ENSMUST00000113683 1005 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Timp3P39876 Prcd-202ENSMUST00000116318 799 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Timp3P39876 Gm6912-201ENSMUST00000117218 544 ntBASIC11.16□□□□□ -0.62
Timp3P39876 Meg3-208ENSMUST00000143847 706 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Timp3P39876 Pax5-213ENSMUST00000173821 996 ntTSL 5 BASIC11.16□□□□□ -0.62
Timp3P39876 Gm10535-201ENSMUST00000182275 915 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Timp3P39876 Platr12-202ENSMUST00000189722 549 ntTSL 3 BASIC11.16□□□□□ -0.62
Timp3P39876 Lamtor1-202ENSMUST00000193465 661 ntTSL 5 BASIC11.16□□□□□ -0.62
Timp3P39876 Gm37714-201ENSMUST00000194742 342 ntBASIC11.16□□□□□ -0.62
Timp3P39876 4930592C13Rik-201ENSMUST00000196791 661 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Timp3P39876 Galns-203ENSMUST00000212319 2111 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Timp3P39876 Gm17795-201ENSMUST00000214505 757 ntBASIC11.16□□□□□ -0.62
Timp3P39876 Taf11-201ENSMUST00000025057 1220 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Timp3P39876 Nupr1-201ENSMUST00000032961 829 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Timp3P39876 Gm9949-201ENSMUST00000067743 962 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Timp3P39876 Shisa3-201ENSMUST00000087241 3760 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Timp3P39876 Hk3-208ENSMUST00000153665 2945 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Timp3P39876 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Timp3P39876 Arid5a-201ENSMUST00000097778 2270 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Timp3P39876 Gm9109-201ENSMUST00000120254 1405 ntBASIC11.16□□□□□ -0.62
Timp3P39876 Pdpk1-204ENSMUST00000115409 4623 ntTSL 5 BASIC11.16□□□□□ -0.62
Timp3P39876 Diaph1-202ENSMUST00000080033 4378 ntAPPRIS ALT2 TSL 1 (best) BASIC11.16□□□□□ -0.62
Timp3P39876 Esrrb-202ENSMUST00000110203 2363 ntTSL 1 (best) BASIC11.16□□□□□ -0.62
Timp3P39876 Sytl1-201ENSMUST00000030674 1951 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.62
Timp3P39876 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Timp3P39876 Slc39a8-202ENSMUST00000081978 3314 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Timp3P39876 Zfp319-201ENSMUST00000057717 7232 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Timp3P39876 L1td1-204ENSMUST00000173659 2547 ntAPPRIS ALT2 TSL 2 BASIC11.15□□□□□ -0.62
Timp3P39876 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Timp3P39876 Gpt-201ENSMUST00000023203 1749 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Timp3P39876 Osbp2-202ENSMUST00000101632 2697 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Timp3P39876 Retreg1-202ENSMUST00000110438 1526 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Timp3P39876 Gdap1l1-202ENSMUST00000109420 2475 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Timp3P39876 Mtif3-202ENSMUST00000066675 4927 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Timp3P39876 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Timp3P39876 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Timp3P39876 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Timp3P39876 Ascc1-201ENSMUST00000050516 1450 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Timp3P39876 Mfge8-202ENSMUST00000107409 2008 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Timp3P39876 Ptger3-201ENSMUST00000041175 3148 ntAPPRIS P2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Timp3P39876 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Timp3P39876 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC11.15□□□□□ -0.62
Timp3P39876 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Timp3P39876 Rpl27a-203ENSMUST00000143107 1158 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Timp3P39876 Gm15494-202ENSMUST00000171665 451 ntTSL 2 BASIC11.15□□□□□ -0.62
Timp3P39876 Gm9002-201ENSMUST00000178437 499 ntBASIC11.15□□□□□ -0.62
Timp3P39876 Gm28198-201ENSMUST00000190938 471 ntTSL 3 BASIC11.15□□□□□ -0.62
Timp3P39876 Gm43568-203ENSMUST00000199116 1270 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Timp3P39876 Gm18905-201ENSMUST00000205454 928 ntBASIC11.15□□□□□ -0.62
Timp3P39876 2310016G11Rik-202ENSMUST00000209111 733 ntTSL 3 BASIC11.15□□□□□ -0.62
Timp3P39876 Gm34030-202ENSMUST00000211434 1126 ntTSL 5 BASIC11.15□□□□□ -0.62
Timp3P39876 AC131690.1-201ENSMUST00000218406 374 ntBASIC11.15□□□□□ -0.62
Timp3P39876 AC155258.1-201ENSMUST00000219303 253 ntBASIC11.15□□□□□ -0.62
Timp3P39876 AC132467.2-202ENSMUST00000227726 559 ntBASIC11.15□□□□□ -0.62
Timp3P39876 Hdhd3-201ENSMUST00000037820 1205 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Timp3P39876 Uqcr10-201ENSMUST00000058407 434 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Timp3P39876 Atp5h-202ENSMUST00000073791 659 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Timp3P39876 Kcnq2-207ENSMUST00000103050 2713 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Timp3P39876 Stip1-201ENSMUST00000025918 2173 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Timp3P39876 Fnbp1-209ENSMUST00000113562 4515 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Timp3P39876 Dnmt3a-205ENSMUST00000172689 2328 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.62
Timp3P39876 Mpp4-201ENSMUST00000066374 2344 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Timp3P39876 Mpp4-202ENSMUST00000078874 2345 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Timp3P39876 Atp6v1c2-208ENSMUST00000221129 1425 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.62
Timp3P39876 Cdc73-201ENSMUST00000018337 11586 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Timp3P39876 Celf1-214ENSMUST00000177642 7806 ntAPPRIS ALT1 TSL 1 (best) BASIC11.15□□□□□ -0.62
Timp3P39876 Zfp777-201ENSMUST00000095944 3184 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Timp3P39876 Atp13a2-203ENSMUST00000127833 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.62
Timp3P39876 Srp72-202ENSMUST00000120550 2297 ntAPPRIS ALT2 TSL 5 BASIC11.15□□□□□ -0.62
Timp3P39876 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC11.15□□□□□ -0.62
Timp3P39876 Kmt2e-202ENSMUST00000115128 7317 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Timp3P39876 Nr4a3-201ENSMUST00000030025 5720 ntAPPRIS P1 TSL 1 (best) BASIC11.15□□□□□ -0.63
Timp3P39876 Mfn2-202ENSMUST00000105714 2427 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Timp3P39876 Dnmt3b-204ENSMUST00000088976 4130 ntAPPRIS ALT2 TSL 1 (best) BASIC11.15□□□□□ -0.63
Timp3P39876 Pde10a-202ENSMUST00000089085 7717 ntAPPRIS P3 TSL 1 (best) BASIC11.15□□□□□ -0.63
Timp3P39876 Grin2c-201ENSMUST00000003351 4279 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Timp3P39876 Gm29724-201ENSMUST00000214688 3062 ntTSL 1 (best) BASIC11.15□□□□□ -0.63
Timp3P39876 Fggy-202ENSMUST00000079223 1891 ntAPPRIS P1 TSL 5 BASIC11.15□□□□□ -0.63
Timp3P39876 Cpt2-201ENSMUST00000030345 2372 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Timp3P39876 Pnck-201ENSMUST00000002087 1536 ntAPPRIS P1 TSL 1 (best) BASIC11.14□□□□□ -0.63
Timp3P39876 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC11.14□□□□□ -0.63
Retrieved 100 of 76,532 protein–RNA pairs in 31.2 ms