Protein–RNA interactions for Protein: P38060

Hmgcl, Hydroxymethylglutaryl-CoA lyase, mitochondrial, mousemouse

Predictions only

Length 325 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HmgclP38060 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HmgclP38060 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HmgclP38060 Racgap1-201ENSMUST00000023756 2933 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HmgclP38060 Ctnnbip1-202ENSMUST00000105692 634 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HmgclP38060 Bola2-202ENSMUST00000106369 642 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HmgclP38060 Gm7488-201ENSMUST00000117148 684 ntBASIC13.39□□□□□ -0.27
HmgclP38060 Gm12537-201ENSMUST00000119266 1002 ntBASIC13.39□□□□□ -0.27
HmgclP38060 Gm12070-201ENSMUST00000119551 1002 ntBASIC13.39□□□□□ -0.27
HmgclP38060 Gm12671-201ENSMUST00000119978 1002 ntBASIC13.39□□□□□ -0.27
HmgclP38060 Gm13292-201ENSMUST00000120014 1000 ntBASIC13.39□□□□□ -0.27
HmgclP38060 Gm12403-201ENSMUST00000121384 959 ntBASIC13.39□□□□□ -0.27
HmgclP38060 Ccl25-205ENSMUST00000127460 867 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
HmgclP38060 Rpl34-203ENSMUST00000133802 711 ntTSL 2 BASIC13.39□□□□□ -0.27
HmgclP38060 4930456L15Rik-201ENSMUST00000145577 1185 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HmgclP38060 Gm10359-201ENSMUST00000180167 1002 ntBASIC13.39□□□□□ -0.27
HmgclP38060 Gm12033-201ENSMUST00000180654 1002 ntBASIC13.39□□□□□ -0.27
HmgclP38060 Gm5559-201ENSMUST00000180755 1002 ntBASIC13.39□□□□□ -0.27
HmgclP38060 Gm4335-201ENSMUST00000182581 1004 ntBASIC13.39□□□□□ -0.27
HmgclP38060 C330022C24Rik-201ENSMUST00000190581 1077 ntTSL 1 (best) BASIC13.39□□□□□ -0.27
HmgclP38060 Gm36979-201ENSMUST00000193616 539 ntTSL 5 BASIC13.39□□□□□ -0.27
HmgclP38060 Rps11-201ENSMUST00000003521 661 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HmgclP38060 Fam173b-201ENSMUST00000042702 1164 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HmgclP38060 Smim11-201ENSMUST00000063641 517 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HmgclP38060 Arr3-201ENSMUST00000113769 1359 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HmgclP38060 Wnk1-223ENSMUST00000177761 11303 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
HmgclP38060 Zbtb4-202ENSMUST00000108639 7811 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HmgclP38060 Adam15-201ENSMUST00000029676 2975 ntAPPRIS P4 TSL 1 (best) BASIC13.39□□□□□ -0.27
HmgclP38060 Dock4-201ENSMUST00000037488 8552 ntAPPRIS P2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HmgclP38060 Alg10b-201ENSMUST00000100309 3727 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HmgclP38060 Kcnma1-214ENSMUST00000190044 3747 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HmgclP38060 Fbxl19-202ENSMUST00000186116 3641 ntTSL 5 BASIC13.39□□□□□ -0.27
HmgclP38060 Mpzl2-201ENSMUST00000034600 3107 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HmgclP38060 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HmgclP38060 Gpc2-201ENSMUST00000014089 2514 ntAPPRIS ALT2 TSL 5 BASIC13.39□□□□□ -0.27
HmgclP38060 Fam198a-204ENSMUST00000215990 2149 ntAPPRIS P1 TSL 1 (best) BASIC13.39□□□□□ -0.27
HmgclP38060 Olfr56-201ENSMUST00000056759 1925 ntTSL 5 BASIC13.39□□□□□ -0.27
HmgclP38060 Mei4-202ENSMUST00000189391 1817 ntAPPRIS ALT2 TSL 1 (best) BASIC13.39□□□□□ -0.27
HmgclP38060 Rnf224-202ENSMUST00000205192 1707 ntAPPRIS P1 BASIC13.39□□□□□ -0.27
HmgclP38060 Arap1-204ENSMUST00000107010 5147 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
HmgclP38060 Synm-201ENSMUST00000051389 6953 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
HmgclP38060 Rbm47-201ENSMUST00000094756 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
HmgclP38060 Kbtbd7-201ENSMUST00000061222 4526 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
HmgclP38060 Pla2g4c-204ENSMUST00000167232 2154 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
HmgclP38060 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HmgclP38060 Nfkb1-206ENSMUST00000164430 3007 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HmgclP38060 Iffo2-201ENSMUST00000040023 5227 ntAPPRIS P3 TSL 5 BASIC13.38□□□□□ -0.27
HmgclP38060 Smarcb1-201ENSMUST00000000925 1660 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
HmgclP38060 Noxa1-202ENSMUST00000114373 1575 ntAPPRIS ALT2 TSL 1 (best) BASIC13.38□□□□□ -0.27
HmgclP38060 AC154527.2-201ENSMUST00000225256 1466 ntBASIC13.38□□□□□ -0.27
HmgclP38060 Arhgef4-201ENSMUST00000047664 3287 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
HmgclP38060 Dclk2-206ENSMUST00000193632 2336 ntAPPRIS ALT2 TSL 5 BASIC13.38□□□□□ -0.27
HmgclP38060 Gm21038-201ENSMUST00000222205 1383 ntBASIC13.38□□□□□ -0.27
HmgclP38060 Fgfr1-202ENSMUST00000117179 4046 ntAPPRIS ALT1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HmgclP38060 Tmem176b-201ENSMUST00000101429 1238 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
HmgclP38060 Rhox2d-201ENSMUST00000115179 685 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
HmgclP38060 Gm15491-201ENSMUST00000133963 751 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HmgclP38060 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HmgclP38060 Gm17870-201ENSMUST00000219489 1174 ntBASIC13.38□□□□□ -0.27
HmgclP38060 Med10-201ENSMUST00000022089 913 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HmgclP38060 AC192088.1-201ENSMUST00000227561 301 ntBASIC13.38□□□□□ -0.27
HmgclP38060 Prss41-201ENSMUST00000024926 1128 ntAPPRIS P2 TSL 1 (best) BASIC13.38□□□□□ -0.27
HmgclP38060 Rpp21-201ENSMUST00000025319 729 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HmgclP38060 Mpc1-201ENSMUST00000046754 920 ntAPPRIS P1 TSL 5 BASIC13.38□□□□□ -0.27
HmgclP38060 Gm5129-201ENSMUST00000065372 300 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
HmgclP38060 Gm2423-201ENSMUST00000074863 733 ntBASIC13.38□□□□□ -0.27
HmgclP38060 Tex13c3-201ENSMUST00000089246 876 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HmgclP38060 Plod2-201ENSMUST00000070522 3649 ntAPPRIS P3 TSL 1 (best) BASIC13.38□□□□□ -0.27
HmgclP38060 Ubqln2-201ENSMUST00000060714 3344 ntAPPRIS P1 BASIC13.38□□□□□ -0.27
HmgclP38060 Gm14963-201ENSMUST00000146751 2558 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HmgclP38060 Mocs1-204ENSMUST00000173033 2588 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HmgclP38060 Cnst-201ENSMUST00000040706 4709 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HmgclP38060 Lrfn2-201ENSMUST00000046254 3202 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HmgclP38060 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC13.38□□□□□ -0.27
HmgclP38060 Blzf1-202ENSMUST00000086032 1602 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HmgclP38060 Gm45003-201ENSMUST00000205875 2158 ntBASIC13.38□□□□□ -0.27
HmgclP38060 Glod4-201ENSMUST00000017430 1434 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HmgclP38060 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HmgclP38060 Bcl2l1-201ENSMUST00000007803 2417 ntAPPRIS P1 TSL 1 (best) BASIC13.38□□□□□ -0.27
HmgclP38060 4732471J01Rik-203ENSMUST00000206300 1887 ntTSL 1 (best) BASIC13.38□□□□□ -0.27
HmgclP38060 Adk-201ENSMUST00000045376 1782 ntAPPRIS P2 TSL 1 (best) BASIC13.37□□□□□ -0.27
HmgclP38060 Wwox-201ENSMUST00000004756 2244 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HmgclP38060 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HmgclP38060 Gan-201ENSMUST00000064488 2652 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HmgclP38060 Erg-203ENSMUST00000113848 2139 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HmgclP38060 Gm38197-201ENSMUST00000192320 2122 ntBASIC13.37□□□□□ -0.27
HmgclP38060 Naa30-201ENSMUST00000037362 4464 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
HmgclP38060 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
HmgclP38060 Tmem110-201ENSMUST00000006701 3742 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HmgclP38060 Psmd11-201ENSMUST00000017572 2848 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HmgclP38060 Arfgap1-205ENSMUST00000108862 2382 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
HmgclP38060 Gnb2-202ENSMUST00000111020 1470 ntTSL 5 BASIC13.37□□□□□ -0.27
HmgclP38060 Gm5779-202ENSMUST00000219564 1477 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HmgclP38060 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HmgclP38060 Gm15684-201ENSMUST00000160605 1814 ntTSL 1 (best) BASIC13.37□□□□□ -0.27
HmgclP38060 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC13.37□□□□□ -0.27
HmgclP38060 Fcrl1-204ENSMUST00000191666 925 ntAPPRIS ALT2 TSL 1 (best) BASIC13.37□□□□□ -0.27
HmgclP38060 Gm38144-201ENSMUST00000192790 465 ntBASIC13.37□□□□□ -0.27
HmgclP38060 Timm13-201ENSMUST00000020440 1225 ntAPPRIS P1 TSL 1 (best) BASIC13.37□□□□□ -0.27
HmgclP38060 1810059H22Rik-208ENSMUST00000204941 642 ntTSL 2 BASIC13.37□□□□□ -0.27
HmgclP38060 Ccdc159-204ENSMUST00000216710 1126 ntAPPRIS ALT2 TSL 5 BASIC13.37□□□□□ -0.27
Retrieved 100 of 76,532 protein–RNA pairs in 87.3 ms