Protein–RNA interactions for Protein: P31648

Slc6a1, Sodium- and chloride-dependent GABA transporter 1, mousemouse

Predictions only

Length 599 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Slc6a1P31648 Tdrd5-201ENSMUST00000121146 3759 ntAPPRIS P2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc6a1P31648 Fig4-201ENSMUST00000043814 3282 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc6a1P31648 Gabrg3-202ENSMUST00000068911 9767 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc6a1P31648 Fam198a-203ENSMUST00000214536 2789 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Slc6a1P31648 Fbln7-202ENSMUST00000110324 3228 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Slc6a1P31648 Psmb10-201ENSMUST00000034369 1311 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc6a1P31648 Dync1i1-204ENSMUST00000115559 2599 ntAPPRIS P3 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc6a1P31648 Capn11-201ENSMUST00000120717 2591 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc6a1P31648 Trem2-202ENSMUST00000113237 1056 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc6a1P31648 Nudt6-208ENSMUST00000146324 1264 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Slc6a1P31648 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc6a1P31648 Cby3-202ENSMUST00000164067 731 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Slc6a1P31648 Gm27494-201ENSMUST00000184735 189 ntBASIC11.7□□□□□ -0.54
Slc6a1P31648 Gm29202-201ENSMUST00000191263 422 ntTSL 5 BASIC11.7□□□□□ -0.54
Slc6a1P31648 Hapln3-202ENSMUST00000205782 930 ntTSL 5 BASIC11.7□□□□□ -0.54
Slc6a1P31648 Thap2-203ENSMUST00000218989 527 ntBASIC11.7□□□□□ -0.54
Slc6a1P31648 Gm18246-201ENSMUST00000221023 728 ntBASIC11.7□□□□□ -0.54
Slc6a1P31648 Eif4g3-204ENSMUST00000105830 3252 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Slc6a1P31648 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Slc6a1P31648 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc6a1P31648 1700128E19Rik-201ENSMUST00000134409 2439 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Slc6a1P31648 Col22a1-202ENSMUST00000159993 8809 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Slc6a1P31648 Gm28729-201ENSMUST00000190704 1964 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Slc6a1P31648 Jakmip3-201ENSMUST00000106111 1571 ntAPPRIS P1 TSL 5 BASIC11.7□□□□□ -0.54
Slc6a1P31648 Gm8096-201ENSMUST00000209921 1591 ntBASIC11.7□□□□□ -0.54
Slc6a1P31648 Gm16582-201ENSMUST00000159627 1930 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Slc6a1P31648 Fam214b-201ENSMUST00000036462 3074 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc6a1P31648 Ppp1r12b-201ENSMUST00000045665 8840 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Slc6a1P31648 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Slc6a1P31648 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC11.7□□□□□ -0.54
Slc6a1P31648 Sumf2-204ENSMUST00000171300 2264 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc6a1P31648 Klf4-201ENSMUST00000107619 3029 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc6a1P31648 Grip1-212ENSMUST00000147356 4145 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc6a1P31648 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Slc6a1P31648 Sema3d-201ENSMUST00000030868 6307 ntAPPRIS P1 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc6a1P31648 Slc27a5-202ENSMUST00000120903 1468 ntTSL 1 (best) BASIC11.7□□□□□ -0.54
Slc6a1P31648 AC164565.1-201ENSMUST00000217520 1484 ntBASIC11.7□□□□□ -0.54
Slc6a1P31648 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC11.7□□□□□ -0.54
Slc6a1P31648 Gm2109-201ENSMUST00000189326 1409 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Slc6a1P31648 Lypd1-201ENSMUST00000027582 1447 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Slc6a1P31648 Stard5-202ENSMUST00000117410 2832 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Slc6a1P31648 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc6a1P31648 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc6a1P31648 Vit-201ENSMUST00000024880 2720 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc6a1P31648 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc6a1P31648 Rap1gds1-202ENSMUST00000098574 3669 ntAPPRIS P3 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc6a1P31648 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC11.69□□□□□ -0.54
Slc6a1P31648 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC11.69□□□□□ -0.54
Slc6a1P31648 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC11.69□□□□□ -0.54
Slc6a1P31648 Slc44a4-201ENSMUST00000007249 2261 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc6a1P31648 Pla2g3-202ENSMUST00000064265 2566 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc6a1P31648 Cnn2-202ENSMUST00000105374 926 ntTSL 5 BASIC11.69□□□□□ -0.54
Slc6a1P31648 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc6a1P31648 Rabepk-202ENSMUST00000113086 1106 ntTSL 5 BASIC11.69□□□□□ -0.54
Slc6a1P31648 Gm15427-201ENSMUST00000117288 531 ntBASIC11.69□□□□□ -0.54
Slc6a1P31648 Rpl18-ps1-201ENSMUST00000121555 525 ntBASIC11.69□□□□□ -0.54
Slc6a1P31648 Gm21984-201ENSMUST00000123117 822 ntTSL 5 BASIC11.69□□□□□ -0.54
Slc6a1P31648 Sumo3-204ENSMUST00000129492 487 ntAPPRIS ALT2 TSL 2 BASIC11.69□□□□□ -0.54
Slc6a1P31648 Fam241b-208ENSMUST00000142796 1135 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc6a1P31648 A530058N18Rik-205ENSMUST00000143993 550 ntTSL 3 BASIC11.69□□□□□ -0.54
Slc6a1P31648 Cystm1-205ENSMUST00000152804 445 ntAPPRIS P2 TSL 3 BASIC11.69□□□□□ -0.54
Slc6a1P31648 Ankrd13d-204ENSMUST00000167215 639 ntTSL 3 BASIC11.69□□□□□ -0.54
Slc6a1P31648 Gm20036-201ENSMUST00000177547 844 ntTSL 3 BASIC11.69□□□□□ -0.54
Slc6a1P31648 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC11.69□□□□□ -0.54
Slc6a1P31648 Gm45612-201ENSMUST00000211320 160 ntBASIC11.69□□□□□ -0.54
Slc6a1P31648 Nxnl2-201ENSMUST00000021828 1167 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc6a1P31648 Tsfm-201ENSMUST00000040560 1206 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc6a1P31648 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc6a1P31648 Arl5c-201ENSMUST00000042971 1571 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc6a1P31648 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc6a1P31648 Cux2-210ENSMUST00000168288 4697 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Slc6a1P31648 Lmo7-201ENSMUST00000100337 6092 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc6a1P31648 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC11.69□□□□□ -0.54
Slc6a1P31648 Med25-211ENSMUST00000208551 2678 ntTSL 2 BASIC11.69□□□□□ -0.54
Slc6a1P31648 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc6a1P31648 Rasl12-201ENSMUST00000085453 2390 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc6a1P31648 Lmln-201ENSMUST00000023497 6147 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc6a1P31648 Stx11-202ENSMUST00000163425 4032 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc6a1P31648 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc6a1P31648 Tesmin-203ENSMUST00000142193 2279 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc6a1P31648 Fgfr3-215ENSMUST00000202138 3960 ntAPPRIS ALT2 TSL 1 (best) BASIC11.69□□□□□ -0.54
Slc6a1P31648 Nudt18-202ENSMUST00000228554 3619 ntBASIC11.68□□□□□ -0.54
Slc6a1P31648 Atp4b-201ENSMUST00000033826 1378 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc6a1P31648 Treh-202ENSMUST00000071219 1927 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Slc6a1P31648 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC11.68□□□□□ -0.54
Slc6a1P31648 Tjap1-201ENSMUST00000012440 2426 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc6a1P31648 Nrp2-203ENSMUST00000075144 6723 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Slc6a1P31648 Gm26635-201ENSMUST00000181077 3199 ntTSL 5 BASIC11.68□□□□□ -0.54
Slc6a1P31648 Fgd2-201ENSMUST00000024810 2612 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc6a1P31648 Pi4kb-201ENSMUST00000072287 3692 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc6a1P31648 Exoc6b-203ENSMUST00000160197 5439 ntAPPRIS P1 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc6a1P31648 Olfr533-206ENSMUST00000217179 2825 ntAPPRIS P1 TSL 5 BASIC11.68□□□□□ -0.54
Slc6a1P31648 Aqr-201ENSMUST00000043160 4888 ntAPPRIS P3 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc6a1P31648 Pfn2-203ENSMUST00000120289 905 ntTSL 2 BASIC11.68□□□□□ -0.54
Slc6a1P31648 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC11.68□□□□□ -0.54
Slc6a1P31648 Gm11795-201ENSMUST00000127180 396 ntTSL 5 BASIC11.68□□□□□ -0.54
Slc6a1P31648 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC11.68□□□□□ -0.54
Slc6a1P31648 Rpl26-206ENSMUST00000167436 606 ntAPPRIS P2 TSL 1 (best) BASIC11.68□□□□□ -0.54
Slc6a1P31648 Gm5177-201ENSMUST00000183092 997 ntBASIC11.68□□□□□ -0.54
Slc6a1P31648 1700080E11Rik-202ENSMUST00000190661 682 ntTSL 1 (best) BASIC11.68□□□□□ -0.54
Retrieved 100 of 76,532 protein–RNA pairs in 31.5 ms