Protein–RNA interactions for Protein: P29595

Nedd8, NEDD8, mousemouse

Predictions only

Length 81 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Nedd8P29595 Ap1s2-201ENSMUST00000033734 1785 ntAPPRIS ALT1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nedd8P29595 Rbm42-201ENSMUST00000042726 1784 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nedd8P29595 Gm16122-201ENSMUST00000142625 1158 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nedd8P29595 Nabp2-204ENSMUST00000166608 979 ntTSL 5 BASIC12.52□□□□□ -0.41
Nedd8P29595 Gm4189-202ENSMUST00000174167 367 ntTSL 3 BASIC12.52□□□□□ -0.41
Nedd8P29595 Gm4899-201ENSMUST00000178708 719 ntBASIC12.52□□□□□ -0.41
Nedd8P29595 Il31-203ENSMUST00000198901 984 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nedd8P29595 5033428I22Rik-203ENSMUST00000210614 952 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nedd8P29595 Pdcd6-201ENSMUST00000022060 1131 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nedd8P29595 AC123645.1-201ENSMUST00000228469 605 ntBASIC12.52□□□□□ -0.41
Nedd8P29595 2310039H08Rik-201ENSMUST00000071430 773 ntAPPRIS P1 BASIC12.52□□□□□ -0.41
Nedd8P29595 S100a16-202ENSMUST00000098911 1127 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nedd8P29595 Pappa-201ENSMUST00000084501 11027 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nedd8P29595 Tbx3os2-201ENSMUST00000135385 1345 ntTSL 1 (best) BASIC12.52□□□□□ -0.41
Nedd8P29595 Renbp-209ENSMUST00000155597 1310 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.41
Nedd8P29595 D030025P21Rik-202ENSMUST00000220643 3987 ntBASIC12.52□□□□□ -0.41
Nedd8P29595 Gm28323-201ENSMUST00000186817 2499 ntBASIC12.52□□□□□ -0.41
Nedd8P29595 Cd33-201ENSMUST00000004728 1962 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nedd8P29595 Rtp3-201ENSMUST00000084922 1425 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.41
Nedd8P29595 Zfp41-201ENSMUST00000054555 3736 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nedd8P29595 Gm10489-201ENSMUST00000180511 1466 ntTSL 2 BASIC12.52□□□□□ -0.41
Nedd8P29595 Eogt-201ENSMUST00000054344 4424 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nedd8P29595 Hnf1b-201ENSMUST00000021016 2759 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nedd8P29595 Poc1b-201ENSMUST00000020113 2862 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Nedd8P29595 Etaa1-201ENSMUST00000076661 4185 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nedd8P29595 Parp16-205ENSMUST00000216702 1643 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nedd8P29595 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nedd8P29595 Faap100-201ENSMUST00000026448 3193 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nedd8P29595 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nedd8P29595 Vash2-201ENSMUST00000047409 4032 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nedd8P29595 F630040K05Rik-202ENSMUST00000180558 2633 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nedd8P29595 2310022A10Rik-204ENSMUST00000187032 1871 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nedd8P29595 Gm37269-201ENSMUST00000193906 1891 ntBASIC12.51□□□□□ -0.41
Nedd8P29595 C030005K06Rik-201ENSMUST00000129164 2076 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nedd8P29595 Nat9-203ENSMUST00000103040 1204 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nedd8P29595 Nat9-204ENSMUST00000103041 953 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Nedd8P29595 Stra8-202ENSMUST00000114997 1207 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nedd8P29595 Mzt2-202ENSMUST00000117136 758 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nedd8P29595 Calu-207ENSMUST00000173216 673 ntTSL 5 BASIC12.51□□□□□ -0.41
Nedd8P29595 Gm23634-201ENSMUST00000175071 91 ntBASIC12.51□□□□□ -0.41
Nedd8P29595 Rbm4-203ENSMUST00000178615 1018 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nedd8P29595 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC12.51□□□□□ -0.41
Nedd8P29595 4732471J01Rik-202ENSMUST00000205787 991 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nedd8P29595 Rps2-ps3-201ENSMUST00000213102 832 ntBASIC12.51□□□□□ -0.41
Nedd8P29595 D830030K20Rik-204ENSMUST00000225885 1142 ntBASIC12.51□□□□□ -0.41
Nedd8P29595 Atp23-201ENSMUST00000026504 903 ntTSL 1 (best) BASIC12.51□□□□□ -0.41
Nedd8P29595 Magohb-201ENSMUST00000032307 767 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nedd8P29595 Vps25-202ENSMUST00000042477 1106 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nedd8P29595 Gm13294-201ENSMUST00000121757 1330 ntBASIC12.51□□□□□ -0.41
Nedd8P29595 Prkcd-204ENSMUST00000112206 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nedd8P29595 Klhl38-201ENSMUST00000022985 2212 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nedd8P29595 Gcnt2-205ENSMUST00000225759 1366 ntAPPRIS ALT2 BASIC12.51□□□□□ -0.41
Nedd8P29595 Dtnb-201ENSMUST00000077930 2376 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nedd8P29595 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nedd8P29595 Syvn1-204ENSMUST00000138532 3464 ntAPPRIS P2 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nedd8P29595 Dpyd-201ENSMUST00000039177 4492 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nedd8P29595 Cyb5rl-203ENSMUST00000106758 2516 ntAPPRIS P1 TSL 5 BASIC12.51□□□□□ -0.41
Nedd8P29595 Fam187a-201ENSMUST00000100369 1563 ntAPPRIS P1 BASIC12.51□□□□□ -0.41
Nedd8P29595 Hadh-201ENSMUST00000029610 1789 ntAPPRIS P1 TSL 1 (best) BASIC12.51□□□□□ -0.41
Nedd8P29595 Tmem63b-201ENSMUST00000113523 3284 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nedd8P29595 Fgd3-203ENSMUST00000110087 4698 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nedd8P29595 Pglyrp2-202ENSMUST00000170392 2068 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nedd8P29595 Bahcc1-202ENSMUST00000118987 10712 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nedd8P29595 Zfp207-201ENSMUST00000017567 2245 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nedd8P29595 Zkscan14-203ENSMUST00000198959 2243 ntBASIC12.5□□□□□ -0.41
Nedd8P29595 Myo18a-220ENSMUST00000164334 5381 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Nedd8P29595 Runx1-201ENSMUST00000023673 5861 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nedd8P29595 Acadsb-201ENSMUST00000015829 6081 ntAPPRIS P2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nedd8P29595 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Nedd8P29595 Ctbs-201ENSMUST00000029840 2629 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nedd8P29595 Tpm2-203ENSMUST00000107914 1164 ntAPPRIS ALT1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nedd8P29595 Gm7222-201ENSMUST00000117512 906 ntBASIC12.5□□□□□ -0.41
Nedd8P29595 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC12.5□□□□□ -0.41
Nedd8P29595 Slc38a6-204ENSMUST00000126488 589 ntTSL 5 BASIC12.5□□□□□ -0.41
Nedd8P29595 Cdpf1-203ENSMUST00000134631 786 ntAPPRIS P1 TSL 5 BASIC12.5□□□□□ -0.41
Nedd8P29595 Lgals3-204ENSMUST00000150290 1298 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nedd8P29595 Gm6728-201ENSMUST00000178117 1065 ntBASIC12.5□□□□□ -0.41
Nedd8P29595 0610005C13Rik-201ENSMUST00000209416 856 ntTSL 5 BASIC12.5□□□□□ -0.41
Nedd8P29595 AC159301.1-201ENSMUST00000225130 1182 ntBASIC12.5□□□□□ -0.41
Nedd8P29595 Lce1a1-201ENSMUST00000074142 705 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nedd8P29595 Tppp3-203ENSMUST00000177126 1396 ntAPPRIS P1 TSL 3 BASIC12.5□□□□□ -0.41
Nedd8P29595 Pdp1-203ENSMUST00000108297 4201 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nedd8P29595 Nrd1-201ENSMUST00000065977 4311 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nedd8P29595 Golga4-201ENSMUST00000084820 7583 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nedd8P29595 Grk3-203ENSMUST00000197776 1570 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Nedd8P29595 Selenbp1-201ENSMUST00000090839 1712 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nedd8P29595 Selenbp2-201ENSMUST00000090848 1719 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nedd8P29595 Il9r-202ENSMUST00000128311 1757 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nedd8P29595 Csrnp3-202ENSMUST00000112394 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nedd8P29595 Mrgprh-201ENSMUST00000075296 1809 ntAPPRIS P1 BASIC12.5□□□□□ -0.41
Nedd8P29595 Trim63-201ENSMUST00000030638 1855 ntAPPRIS ALT2 TSL 5 BASIC12.5□□□□□ -0.41
Nedd8P29595 Ciart-202ENSMUST00000159739 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nedd8P29595 Slc12a8-202ENSMUST00000117134 2081 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Nedd8P29595 Zfp248-205ENSMUST00000161519 2243 ntTSL 1 (best) BASIC12.5□□□□□ -0.41
Nedd8P29595 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nedd8P29595 Gm44401-201ENSMUST00000204462 2375 ntBASIC12.5□□□□□ -0.41
Nedd8P29595 Ankmy2-201ENSMUST00000041640 2456 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nedd8P29595 Mtmr7-202ENSMUST00000048898 2488 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nedd8P29595 Cdk11b-201ENSMUST00000067081 2595 ntAPPRIS P3 TSL 1 (best) BASIC12.5□□□□□ -0.41
Nedd8P29595 Coq3-201ENSMUST00000029909 2651 ntAPPRIS P1 TSL 1 (best) BASIC12.5□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 43.8 ms