Protein–RNA interactions for Protein: P08775

Polr2a, DNA-directed RNA polymerase II subunit RPB1, mousemouse

Known RBP Predictions only

Length 1,970 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Polr2aP08775 Gm9242-201ENSMUST00000177820 1074 ntAPPRIS P1 BASIC15.22■□□□□ 0.03
Polr2aP08775 Gm2546-201ENSMUST00000182630 991 ntBASIC15.22■□□□□ 0.03
Polr2aP08775 Gm4691-202ENSMUST00000182989 885 ntTSL 5 BASIC15.22■□□□□ 0.03
Polr2aP08775 Gm3508-201ENSMUST00000186012 792 ntBASIC15.22■□□□□ 0.03
Polr2aP08775 Gm37835-201ENSMUST00000193305 361 ntBASIC15.22■□□□□ 0.03
Polr2aP08775 Gm38297-201ENSMUST00000195122 1057 ntBASIC15.22■□□□□ 0.03
Polr2aP08775 Gm5641-202ENSMUST00000198699 1080 ntBASIC15.22■□□□□ 0.03
Polr2aP08775 Acsm5-207ENSMUST00000207813 1084 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Polr2aP08775 2310002L09Rik-201ENSMUST00000030101 958 ntAPPRIS P3 TSL 1 (best) BASIC15.22■□□□□ 0.03
Polr2aP08775 Gm6994-201ENSMUST00000088880 1163 ntTSL 1 (best) BASIC15.22■□□□□ 0.03
Polr2aP08775 Slc36a1-202ENSMUST00000108867 1611 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Polr2aP08775 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Polr2aP08775 Papd5-202ENSMUST00000118952 4597 ntAPPRIS P1 TSL 1 (best) BASIC15.22■□□□□ 0.03
Polr2aP08775 6430550D23Rik-201ENSMUST00000086145 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC15.22■□□□□ 0.03
Polr2aP08775 Crocc-202ENSMUST00000097816 6273 ntTSL 5 BASIC15.21■□□□□ 0.03
Polr2aP08775 Unc45bos-201ENSMUST00000156395 1306 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Polr2aP08775 Mecr-201ENSMUST00000030742 1337 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Polr2aP08775 AC139350.1-201ENSMUST00000227064 1594 ntBASIC15.21■□□□□ 0.03
Polr2aP08775 Gm15889-202ENSMUST00000212669 2443 ntBASIC15.21■□□□□ 0.03
Polr2aP08775 Prpf3-201ENSMUST00000015892 2933 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Polr2aP08775 Gm16278-201ENSMUST00000148064 2071 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Polr2aP08775 Lsm14b-202ENSMUST00000058764 2566 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Polr2aP08775 Bhmt2-201ENSMUST00000015941 2467 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Polr2aP08775 9130024F11Rik-202ENSMUST00000185204 2628 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Polr2aP08775 Mapk8-204ENSMUST00000111944 1528 ntAPPRIS ALT1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Polr2aP08775 Fgf8-204ENSMUST00000111925 702 ntTSL 5 BASIC15.21■□□□□ 0.03
Polr2aP08775 Gm11755-201ENSMUST00000144096 891 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Polr2aP08775 Egfl7-209ENSMUST00000150404 892 ntAPPRIS P4 TSL 5 BASIC15.21■□□□□ 0.03
Polr2aP08775 Gm5523-201ENSMUST00000180415 997 ntBASIC15.21■□□□□ 0.03
Polr2aP08775 Gm26740-201ENSMUST00000180456 358 ntTSL 3 BASIC15.21■□□□□ 0.03
Polr2aP08775 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC15.21■□□□□ 0.03
Polr2aP08775 Ppcdc-207ENSMUST00000214339 738 ntTSL 2 BASIC15.21■□□□□ 0.03
Polr2aP08775 AC131330.1-201ENSMUST00000227814 1015 ntBASIC15.21■□□□□ 0.03
Polr2aP08775 Prss34-201ENSMUST00000037453 1216 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Polr2aP08775 Agrp-201ENSMUST00000005849 661 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.03
Polr2aP08775 Mfsd6-201ENSMUST00000087701 3493 ntAPPRIS ALT2 TSL 1 (best) BASIC15.21■□□□□ 0.03
Polr2aP08775 Rarg-201ENSMUST00000043172 2953 ntAPPRIS P3 TSL 1 (best) BASIC15.21■□□□□ 0.03
Polr2aP08775 Gm12503-201ENSMUST00000146576 3127 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Polr2aP08775 Csnk1d-201ENSMUST00000018274 3675 ntAPPRIS P4 TSL 1 (best) BASIC15.21■□□□□ 0.03
Polr2aP08775 Rgs3-204ENSMUST00000107420 2752 ntTSL 1 (best) BASIC15.21■□□□□ 0.03
Polr2aP08775 Tox2-202ENSMUST00000109428 2947 ntAPPRIS ALT2 TSL 5 BASIC15.21■□□□□ 0.02
Polr2aP08775 Tesk2-203ENSMUST00000106459 2444 ntTSL 1 (best) BASIC15.21■□□□□ 0.02
Polr2aP08775 Gm43273-201ENSMUST00000199649 2594 ntBASIC15.21■□□□□ 0.02
Polr2aP08775 Pelp1-201ENSMUST00000019065 3435 ntAPPRIS P1 TSL 1 (best) BASIC15.21■□□□□ 0.02
Polr2aP08775 Fignl2-202ENSMUST00000213610 4462 ntAPPRIS P1 TSL 5 BASIC15.2■□□□□ 0.02
Polr2aP08775 Egr1-201ENSMUST00000064795 4484 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Polr2aP08775 Alas1-207ENSMUST00000141118 3399 ntAPPRIS P2 TSL 5 BASIC15.2■□□□□ 0.02
Polr2aP08775 Ube2j1-202ENSMUST00000124992 3530 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Polr2aP08775 Cdk2ap1-204ENSMUST00000111474 1286 ntAPPRIS ALT1 TSL 2 BASIC15.2■□□□□ 0.02
Polr2aP08775 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Polr2aP08775 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC15.2■□□□□ 0.02
Polr2aP08775 Olfr398-201ENSMUST00000053874 945 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Polr2aP08775 Rps15-202ENSMUST00000068408 500 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Polr2aP08775 Klk1b27-201ENSMUST00000079859 889 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Polr2aP08775 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Polr2aP08775 Nde1-203ENSMUST00000117958 1551 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Polr2aP08775 Sec14l1-201ENSMUST00000021177 2866 ntAPPRIS P3 TSL 1 (best) BASIC15.2■□□□□ 0.02
Polr2aP08775 Ndst2-202ENSMUST00000223679 3907 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Polr2aP08775 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Polr2aP08775 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC15.2■□□□□ 0.02
Polr2aP08775 Hhat-201ENSMUST00000044190 2839 ntAPPRIS P2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Polr2aP08775 Wnk2-201ENSMUST00000035538 6630 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Polr2aP08775 Fgf18-202ENSMUST00000109363 991 ntTSL 3 BASIC15.2■□□□□ 0.02
Polr2aP08775 1700084C06Rik-201ENSMUST00000135674 750 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Polr2aP08775 Ighv8-4-201ENSMUST00000178949 294 ntAPPRIS P1 BASIC15.2■□□□□ 0.02
Polr2aP08775 Gm44405-201ENSMUST00000198952 126 ntBASIC15.2■□□□□ 0.02
Polr2aP08775 Gm8913-201ENSMUST00000209491 641 ntBASIC15.2■□□□□ 0.02
Polr2aP08775 Gm45765-201ENSMUST00000212027 1035 ntTSL 1 (best) BASIC15.2■□□□□ 0.02
Polr2aP08775 AC154276.3-201ENSMUST00000227643 998 ntBASIC15.2■□□□□ 0.02
Polr2aP08775 Dnajc4-201ENSMUST00000025915 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC15.2■□□□□ 0.02
Polr2aP08775 Faf1-201ENSMUST00000102724 4468 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Polr2aP08775 Trim37-201ENSMUST00000041282 5632 ntAPPRIS P1 TSL 1 (best) BASIC15.2■□□□□ 0.02
Polr2aP08775 AC126444.1-201ENSMUST00000225938 1768 ntBASIC15.2■□□□□ 0.02
Polr2aP08775 Ppox-201ENSMUST00000073120 1821 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Polr2aP08775 Cstf2-201ENSMUST00000033609 4502 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Polr2aP08775 Rimkla-201ENSMUST00000049994 4097 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Polr2aP08775 Txn2-203ENSMUST00000109747 1778 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Polr2aP08775 Cep104-201ENSMUST00000047497 5151 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Polr2aP08775 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Polr2aP08775 Zfp853-201ENSMUST00000180336 1956 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Polr2aP08775 Glis1-202ENSMUST00000106738 2744 ntAPPRIS ALT2 TSL 5 BASIC15.19■□□□□ 0.02
Polr2aP08775 Gm11568-201ENSMUST00000107434 1145 ntAPPRIS P1 BASIC15.19■□□□□ 0.02
Polr2aP08775 Pla2g10-202ENSMUST00000115807 964 ntTSL 1 (best) BASIC15.19■□□□□ 0.02
Polr2aP08775 Gm12616-201ENSMUST00000118594 382 ntBASIC15.19■□□□□ 0.02
Polr2aP08775 Rpl28-ps1-201ENSMUST00000121497 414 ntBASIC15.19■□□□□ 0.02
Polr2aP08775 Gm12208-201ENSMUST00000122004 163 ntBASIC15.19■□□□□ 0.02
Polr2aP08775 Gm10051-201ENSMUST00000145209 414 ntBASIC15.19■□□□□ 0.02
Polr2aP08775 Rps28-202ENSMUST00000166693 271 ntAPPRIS P1 TSL 5 BASIC15.19■□□□□ 0.02
Polr2aP08775 Gm12624-201ENSMUST00000177615 382 ntBASIC15.19■□□□□ 0.02
Polr2aP08775 Gm12621-201ENSMUST00000177760 382 ntBASIC15.19■□□□□ 0.02
Polr2aP08775 Gm12615-201ENSMUST00000177970 382 ntBASIC15.19■□□□□ 0.02
Polr2aP08775 Gm12622-201ENSMUST00000177975 382 ntBASIC15.19■□□□□ 0.02
Polr2aP08775 Gm12627-201ENSMUST00000178412 382 ntBASIC15.19■□□□□ 0.02
Polr2aP08775 Gm12625-201ENSMUST00000179122 382 ntBASIC15.19■□□□□ 0.02
Polr2aP08775 Gm12614-201ENSMUST00000179586 382 ntBASIC15.19■□□□□ 0.02
Polr2aP08775 Gm12613-201ENSMUST00000180323 382 ntBASIC15.19■□□□□ 0.02
Polr2aP08775 Saa2-202ENSMUST00000210272 511 ntTSL 3 BASIC15.19■□□□□ 0.02
Polr2aP08775 Ccdc153-202ENSMUST00000213891 792 ntAPPRIS ALT2 TSL 3 BASIC15.19■□□□□ 0.02
Polr2aP08775 Timm9-201ENSMUST00000021486 794 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Polr2aP08775 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC15.19■□□□□ 0.02
Retrieved 100 of 76,532 protein–RNA pairs in 51.2 ms