Protein–RNA interactions for Protein: P06804

Tnf, Tumor necrosis factor, mousemouse

Predictions only

Length 235 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TnfP06804 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TnfP06804 Hsd3b4-202ENSMUST00000196861 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TnfP06804 Gm10681-201ENSMUST00000058728 1610 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TnfP06804 Gm38042-201ENSMUST00000191614 5208 ntBASIC14.39□□□□□ -0.11
TnfP06804 Atxn7l1-202ENSMUST00000090597 2563 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TnfP06804 Ces1h-201ENSMUST00000145041 1870 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TnfP06804 Usp20-202ENSMUST00000102849 5088 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TnfP06804 Pgr-201ENSMUST00000070463 3068 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TnfP06804 Pgr-202ENSMUST00000098986 3068 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TnfP06804 Tbx3os1-206ENSMUST00000202307 1787 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TnfP06804 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TnfP06804 Prrxl1-202ENSMUST00000186452 2371 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
TnfP06804 Mto1-201ENSMUST00000034896 2366 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TnfP06804 Ell3-202ENSMUST00000116432 1674 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TnfP06804 1300002E11Rik-202ENSMUST00000181780 1650 ntTSL 2 BASIC14.39□□□□□ -0.11
TnfP06804 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
TnfP06804 Hdac2-202ENSMUST00000105510 3250 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
TnfP06804 Orai2-201ENSMUST00000041048 3908 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TnfP06804 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.38□□□□□ -0.11
TnfP06804 Rhbdd3-203ENSMUST00000109878 1611 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TnfP06804 Msi1-208ENSMUST00000150779 3133 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TnfP06804 Gm43650-201ENSMUST00000197337 1382 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TnfP06804 Gm30214-201ENSMUST00000199271 1383 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TnfP06804 Pafah1b1-202ENSMUST00000102520 5789 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TnfP06804 Tmem9b-202ENSMUST00000118571 1771 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TnfP06804 4933409G03Rik-201ENSMUST00000102713 1263 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TnfP06804 Tomm5-204ENSMUST00000107810 639 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TnfP06804 Rhox2f-201ENSMUST00000115173 799 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TnfP06804 Gm10863-204ENSMUST00000147620 776 ntTSL 3 BASIC14.38□□□□□ -0.11
TnfP06804 Proscos-202ENSMUST00000178990 666 ntBASIC14.38□□□□□ -0.11
TnfP06804 Ffar3-202ENSMUST00000185748 1234 ntAPPRIS P1 BASIC14.38□□□□□ -0.11
TnfP06804 S100a8-201ENSMUST00000069927 486 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TnfP06804 Tmem107-201ENSMUST00000075980 779 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TnfP06804 Ids-201ENSMUST00000101509 4972 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TnfP06804 Pdlim7-201ENSMUST00000046246 1697 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TnfP06804 Gm38577-201ENSMUST00000221531 4545 ntBASIC14.38□□□□□ -0.11
TnfP06804 G6pc3-201ENSMUST00000070334 1404 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TnfP06804 Emilin2-201ENSMUST00000024849 3910 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TnfP06804 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC14.38□□□□□ -0.11
TnfP06804 Sh3bp5-202ENSMUST00000100730 2633 ntAPPRIS ALT2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TnfP06804 Pef1-201ENSMUST00000030563 1551 ntAPPRIS P1 TSL 1 (best) BASIC14.38□□□□□ -0.11
TnfP06804 Ptprk-201ENSMUST00000166468 6177 ntAPPRIS P2 TSL 2 BASIC14.38□□□□□ -0.11
TnfP06804 Tle3-205ENSMUST00000159630 4065 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TnfP06804 Atp2a3-202ENSMUST00000108484 4467 ntAPPRIS ALT2 TSL 5 BASIC14.38□□□□□ -0.11
TnfP06804 Las1l-201ENSMUST00000079987 2530 ntAPPRIS P2 TSL 1 (best) BASIC14.38□□□□□ -0.11
TnfP06804 Ap2m1-201ENSMUST00000007216 2937 ntAPPRIS P3 TSL 5 BASIC14.38□□□□□ -0.11
TnfP06804 Stxbp1-202ENSMUST00000077458 3616 ntTSL 1 (best) BASIC14.38□□□□□ -0.11
TnfP06804 Neurl1a-201ENSMUST00000111807 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TnfP06804 Osbpl8-202ENSMUST00000105275 7204 ntAPPRIS ALT1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TnfP06804 Rab37-201ENSMUST00000021076 2210 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TnfP06804 Gm10040-201ENSMUST00000080726 1662 ntBASIC14.37□□□□□ -0.11
TnfP06804 Cdkn1b-201ENSMUST00000003115 2393 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TnfP06804 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.37□□□□□ -0.11
TnfP06804 Gm13226-201ENSMUST00000117838 404 ntBASIC14.37□□□□□ -0.11
TnfP06804 Gm15851-201ENSMUST00000160564 662 ntTSL 3 BASIC14.37□□□□□ -0.11
TnfP06804 Gm29127-201ENSMUST00000188304 517 ntBASIC14.37□□□□□ -0.11
TnfP06804 Gm37753-201ENSMUST00000192178 439 ntTSL 2 BASIC14.37□□□□□ -0.11
TnfP06804 Gm5149-201ENSMUST00000199768 620 ntTSL 3 BASIC14.37□□□□□ -0.11
TnfP06804 AC166349.1-201ENSMUST00000220866 695 ntBASIC14.37□□□□□ -0.11
TnfP06804 AC125350.2-201ENSMUST00000224737 727 ntBASIC14.37□□□□□ -0.11
TnfP06804 AC122459.1-201ENSMUST00000228373 885 ntBASIC14.37□□□□□ -0.11
TnfP06804 Tpd52-204ENSMUST00000094381 1074 ntTSL 3 BASIC14.37□□□□□ -0.11
TnfP06804 Celrr-202ENSMUST00000181433 1561 ntTSL 1 (best) BASIC14.37□□□□□ -0.11
TnfP06804 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TnfP06804 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TnfP06804 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC14.37□□□□□ -0.11
TnfP06804 Mcoln2-201ENSMUST00000011152 2520 ntAPPRIS P4 TSL 1 (best) BASIC14.37□□□□□ -0.11
TnfP06804 Tap1-206ENSMUST00000170086 2953 ntAPPRIS P3 TSL 1 (best) BASIC14.37□□□□□ -0.11
TnfP06804 Sphk2-201ENSMUST00000072836 2968 ntAPPRIS P1 TSL 1 (best) BASIC14.37□□□□□ -0.11
TnfP06804 Grin1-203ENSMUST00000114308 4165 ntTSL 5 BASIC14.37□□□□□ -0.11
TnfP06804 Fam167a-201ENSMUST00000121288 4231 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TnfP06804 Gm38197-201ENSMUST00000192320 2122 ntBASIC14.36□□□□□ -0.11
TnfP06804 Serpinb2-201ENSMUST00000009356 1970 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TnfP06804 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TnfP06804 Chd4-203ENSMUST00000112392 6652 ntAPPRIS ALT2 TSL 5 BASIC14.36□□□□□ -0.11
TnfP06804 Tmed5-202ENSMUST00000061203 2194 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TnfP06804 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC14.36□□□□□ -0.11
TnfP06804 Pdcd6ip-201ENSMUST00000035086 5951 ntAPPRIS P3 TSL 1 (best) BASIC14.36□□□□□ -0.11
TnfP06804 AC139350.1-201ENSMUST00000227064 1594 ntBASIC14.36□□□□□ -0.11
TnfP06804 Gm11400-201ENSMUST00000120853 1214 ntBASIC14.36□□□□□ -0.11
TnfP06804 Gm10156-201ENSMUST00000122364 462 ntBASIC14.36□□□□□ -0.11
TnfP06804 Gm13716-201ENSMUST00000126401 808 ntTSL 5 BASIC14.36□□□□□ -0.11
TnfP06804 Gm11261-203ENSMUST00000132470 838 ntTSL 5 BASIC14.36□□□□□ -0.11
TnfP06804 Pisd-ps2-202ENSMUST00000142526 1175 ntBASIC14.36□□□□□ -0.11
TnfP06804 Surf2-201ENSMUST00000015017 1203 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TnfP06804 Tldc2-202ENSMUST00000166140 639 ntAPPRIS P2 TSL 5 BASIC14.36□□□□□ -0.11
TnfP06804 Gm9299-201ENSMUST00000206392 1140 ntBASIC14.36□□□□□ -0.11
TnfP06804 Chd3os-203ENSMUST00000218008 1026 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TnfP06804 Atp6v0c-201ENSMUST00000024932 1183 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TnfP06804 Sipa1-202ENSMUST00000080824 3837 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TnfP06804 Ttc7-201ENSMUST00000041110 4614 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TnfP06804 Kcna5-201ENSMUST00000060972 2862 ntAPPRIS P1 BASIC14.36□□□□□ -0.11
TnfP06804 Entpd2-201ENSMUST00000028328 1935 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TnfP06804 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TnfP06804 Lsr-202ENSMUST00000098553 1930 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TnfP06804 Atp2b3-201ENSMUST00000033744 3894 ntTSL 1 (best) BASIC14.36□□□□□ -0.11
TnfP06804 Rwdd4a-201ENSMUST00000033973 2921 ntAPPRIS P1 TSL 2 BASIC14.36□□□□□ -0.11
TnfP06804 Ppig-201ENSMUST00000040915 6245 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TnfP06804 Sgo2a-201ENSMUST00000027202 4939 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
TnfP06804 Fbxo41-202ENSMUST00000161078 6562 ntAPPRIS P1 TSL 1 (best) BASIC14.36□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 37.2 ms