Protein–RNA interactions for Protein: O88544

Cops4, COP9 signalosome complex subunit 4, mousemouse

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cops4O88544 Alx1-208ENSMUST00000219194 1695 ntAPPRIS P1 TSL 5 BASIC12.54□□□□□ -0.4
Cops4O88544 Pla2g10-201ENSMUST00000023364 1423 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cops4O88544 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cops4O88544 Sema7a-201ENSMUST00000043059 3297 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cops4O88544 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cops4O88544 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cops4O88544 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cops4O88544 Fancc-201ENSMUST00000073029 3165 ntAPPRIS P3 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cops4O88544 Laptm5-207ENSMUST00000151698 2600 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cops4O88544 Nars-201ENSMUST00000025483 2632 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cops4O88544 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cops4O88544 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cops4O88544 Hsd3b7-201ENSMUST00000046863 1828 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cops4O88544 Eme2-201ENSMUST00000119848 5226 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cops4O88544 Gm15957-201ENSMUST00000118893 974 ntBASIC12.54□□□□□ -0.4
Cops4O88544 Gm14321-202ENSMUST00000139927 351 ntTSL 5 BASIC12.54□□□□□ -0.4
Cops4O88544 Gm18737-201ENSMUST00000173594 937 ntBASIC12.54□□□□□ -0.4
Cops4O88544 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC12.54□□□□□ -0.4
Cops4O88544 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC12.54□□□□□ -0.4
Cops4O88544 AC121788.1-202ENSMUST00000218801 871 ntTSL 5 BASIC12.54□□□□□ -0.4
Cops4O88544 AC131187.1-201ENSMUST00000224567 809 ntBASIC12.54□□□□□ -0.4
Cops4O88544 C1qa-201ENSMUST00000046285 1040 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cops4O88544 Ptpn9-201ENSMUST00000034832 4101 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cops4O88544 2410002F23Rik-206ENSMUST00000107950 3336 ntAPPRIS P2 TSL 2 BASIC12.54□□□□□ -0.4
Cops4O88544 Lctl-201ENSMUST00000034969 2171 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cops4O88544 Gm26728-202ENSMUST00000203423 1333 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cops4O88544 Pou2af1-201ENSMUST00000034554 2548 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cops4O88544 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cops4O88544 Sltm-206ENSMUST00000216816 3755 ntAPPRIS ALT2 TSL 5 BASIC12.54□□□□□ -0.4
Cops4O88544 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC12.54□□□□□ -0.4
Cops4O88544 Klhdc4-210ENSMUST00000174717 1662 ntTSL 5 BASIC12.54□□□□□ -0.4
Cops4O88544 Psrc1-201ENSMUST00000090561 1686 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cops4O88544 Cpeb4-201ENSMUST00000020543 2312 ntAPPRIS P2 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cops4O88544 1600020E01Rik-206ENSMUST00000204663 2007 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cops4O88544 Gm13613-201ENSMUST00000126240 1444 ntTSL 1 (best) BASIC12.54□□□□□ -0.4
Cops4O88544 Slco4a1-202ENSMUST00000038259 3010 ntAPPRIS P1 TSL 1 (best) BASIC12.54□□□□□ -0.4
Cops4O88544 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cops4O88544 Hpse2-201ENSMUST00000099428 1779 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cops4O88544 Il13ra1-201ENSMUST00000033418 3712 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cops4O88544 CT025626.1-201ENSMUST00000223735 1455 ntBASIC12.53□□□□□ -0.4
Cops4O88544 Ulk3-201ENSMUST00000053230 2826 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cops4O88544 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cops4O88544 Slc16a2-201ENSMUST00000042664 4152 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cops4O88544 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.53□□□□□ -0.4
Cops4O88544 Chrna10-201ENSMUST00000084830 2513 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cops4O88544 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cops4O88544 Cdyl-202ENSMUST00000163595 3575 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cops4O88544 Sgip1-201ENSMUST00000066824 4305 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cops4O88544 Olfr1411-203ENSMUST00000216444 1901 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cops4O88544 Gm11779-201ENSMUST00000118541 368 ntBASIC12.53□□□□□ -0.4
Cops4O88544 Gm14494-201ENSMUST00000118786 435 ntBASIC12.53□□□□□ -0.4
Cops4O88544 Rerg-203ENSMUST00000119610 890 ntTSL 3 BASIC12.53□□□□□ -0.4
Cops4O88544 Chchd7-205ENSMUST00000120732 711 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cops4O88544 Gm16151-201ENSMUST00000129696 639 ntTSL 3 BASIC12.53□□□□□ -0.4
Cops4O88544 Dbi-207ENSMUST00000151708 491 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cops4O88544 Gm36972-201ENSMUST00000194000 676 ntTSL 3 BASIC12.53□□□□□ -0.4
Cops4O88544 Ybx1-ps2-201ENSMUST00000201305 957 ntBASIC12.53□□□□□ -0.4
Cops4O88544 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cops4O88544 Gm31727-201ENSMUST00000210102 360 ntTSL 3 BASIC12.53□□□□□ -0.4
Cops4O88544 Smim8-201ENSMUST00000029972 786 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cops4O88544 Olfr283-201ENSMUST00000057386 1102 ntAPPRIS P1 BASIC12.53□□□□□ -0.4
Cops4O88544 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.53□□□□□ -0.4
Cops4O88544 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cops4O88544 Sesn3-207ENSMUST00000209187 1700 ntTSL 5 BASIC12.53□□□□□ -0.4
Cops4O88544 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cops4O88544 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cops4O88544 Necab1-202ENSMUST00000108273 2135 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cops4O88544 M6pr-202ENSMUST00000112610 2539 ntAPPRIS P1 TSL 5 BASIC12.53□□□□□ -0.4
Cops4O88544 M6pr-201ENSMUST00000007602 2515 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cops4O88544 Phactr3-205ENSMUST00000108917 4858 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cops4O88544 Nrn1-204ENSMUST00000224323 1779 ntBASIC12.53□□□□□ -0.4
Cops4O88544 4921504A21Rik-201ENSMUST00000180594 2156 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cops4O88544 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cops4O88544 Rfc2-201ENSMUST00000023867 4995 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cops4O88544 Gps1-208ENSMUST00000208737 1843 ntAPPRIS ALT1 TSL 5 BASIC12.53□□□□□ -0.4
Cops4O88544 Rnf181-201ENSMUST00000069580 1434 ntAPPRIS P3 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cops4O88544 C2cd4c-201ENSMUST00000059699 6729 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cops4O88544 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.53□□□□□ -0.4
Cops4O88544 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.53□□□□□ -0.4
Cops4O88544 Tnfaip8-207ENSMUST00000148159 1921 ntTSL 1 (best) BASIC12.52□□□□□ -0.4
Cops4O88544 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Cops4O88544 Rtraf-201ENSMUST00000022341 1562 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cops4O88544 Cox19-201ENSMUST00000049630 2461 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cops4O88544 Kdm3a-214ENSMUST00000207023 4753 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Cops4O88544 Mpp3-202ENSMUST00000100400 2997 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cops4O88544 H2-Q6-202ENSMUST00000174699 2085 ntAPPRIS P1 TSL 5 BASIC12.52□□□□□ -0.4
Cops4O88544 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.4
Cops4O88544 Gatad2a-206ENSMUST00000212478 3622 ntAPPRIS ALT2 TSL 5 BASIC12.52□□□□□ -0.4
Cops4O88544 Nrxn1-202ENSMUST00000072671 8118 ntTSL 5 BASIC12.52□□□□□ -0.41
Cops4O88544 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.52□□□□□ -0.41
Cops4O88544 Rhox7b-201ENSMUST00000115156 1091 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cops4O88544 Crybb3-202ENSMUST00000117143 749 ntAPPRIS P1 TSL 3 BASIC12.52□□□□□ -0.41
Cops4O88544 Qdpr-204ENSMUST00000120867 1234 ntTSL 5 BASIC12.52□□□□□ -0.41
Cops4O88544 Nabp1-202ENSMUST00000185534 708 ntTSL 2 BASIC12.52□□□□□ -0.41
Cops4O88544 Gm20553-201ENSMUST00000204205 844 ntBASIC12.52□□□□□ -0.41
Cops4O88544 Gm44719-201ENSMUST00000206404 149 ntBASIC12.52□□□□□ -0.41
Cops4O88544 Tlcd2-201ENSMUST00000043598 1153 ntAPPRIS P3 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cops4O88544 Rhox7a-201ENSMUST00000096454 983 ntAPPRIS P1 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cops4O88544 Chst3-201ENSMUST00000068690 5985 ntAPPRIS ALT2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Cops4O88544 Kifc1-204ENSMUST00000173492 2350 ntAPPRIS P2 TSL 1 (best) BASIC12.52□□□□□ -0.41
Retrieved 100 of 76,532 protein–RNA pairs in 80.5 ms