Protein–RNA interactions for Protein: O54965

Rnf13, E3 ubiquitin-protein ligase RNF13, mousemouse

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rnf13O54965 Ppp1r16b-201ENSMUST00000045503 6408 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf13O54965 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf13O54965 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf13O54965 Alas2-201ENSMUST00000066337 2037 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf13O54965 Acsf3-203ENSMUST00000212790 2171 ntAPPRIS P2 TSL 5 BASIC12.33□□□□□ -0.44
Rnf13O54965 Stk25-201ENSMUST00000027498 4249 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf13O54965 Gabpb1-205ENSMUST00000110424 2613 ntAPPRIS P3 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf13O54965 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf13O54965 Gm45667-201ENSMUST00000210380 1316 ntBASIC12.33□□□□□ -0.44
Rnf13O54965 Gm44891-201ENSMUST00000208817 2223 ntBASIC12.33□□□□□ -0.44
Rnf13O54965 Acin1-219ENSMUST00000148754 2373 ntAPPRIS ALT2 TSL 5 BASIC12.33□□□□□ -0.44
Rnf13O54965 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC12.33□□□□□ -0.44
Rnf13O54965 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf13O54965 Kif5a-201ENSMUST00000099172 6295 ntAPPRIS P1 TSL 1 (best) BASIC12.33□□□□□ -0.44
Rnf13O54965 Slc13a5-201ENSMUST00000021161 3329 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf13O54965 Gm20632-201ENSMUST00000176760 2427 ntBASIC12.32□□□□□ -0.44
Rnf13O54965 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf13O54965 Efhc1-201ENSMUST00000038447 2146 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf13O54965 Kars-202ENSMUST00000093120 2131 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf13O54965 Myh13-202ENSMUST00000108684 6062 ntAPPRIS P1 TSL 5 BASIC12.32□□□□□ -0.44
Rnf13O54965 Lrrc34-201ENSMUST00000029252 1891 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf13O54965 Ranbp17-202ENSMUST00000102815 5001 ntAPPRIS P2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf13O54965 Fam49b-201ENSMUST00000063838 3797 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf13O54965 Rab15-201ENSMUST00000021459 3158 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf13O54965 S100pbp-205ENSMUST00000117350 2241 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf13O54965 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf13O54965 Ins2-205ENSMUST00000105933 552 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf13O54965 Ins2-206ENSMUST00000105934 480 ntAPPRIS P1 TSL 3 BASIC12.32□□□□□ -0.44
Rnf13O54965 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC12.32□□□□□ -0.44
Rnf13O54965 Dusp14-203ENSMUST00000108101 1082 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf13O54965 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf13O54965 Gm27494-201ENSMUST00000184735 189 ntBASIC12.32□□□□□ -0.44
Rnf13O54965 Gm5264-201ENSMUST00000190584 848 ntBASIC12.32□□□□□ -0.44
Rnf13O54965 5830408C22Rik-201ENSMUST00000210072 1115 ntTSL 5 BASIC12.32□□□□□ -0.44
Rnf13O54965 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf13O54965 1700018B24Rik-201ENSMUST00000036023 593 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf13O54965 Polr2g-201ENSMUST00000096261 868 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf13O54965 Bpi-203ENSMUST00000109500 1911 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Rnf13O54965 Anapc11-201ENSMUST00000026128 3229 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf13O54965 Cnbd2-202ENSMUST00000073942 1758 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf13O54965 Igf2-201ENSMUST00000000033 3708 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf13O54965 Ptch2-201ENSMUST00000030443 4382 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf13O54965 Sqle-201ENSMUST00000022977 2758 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf13O54965 A430093F15Rik-204ENSMUST00000186596 2115 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf13O54965 Il20ra-201ENSMUST00000020185 2105 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf13O54965 Fuz-213ENSMUST00000209039 1453 ntTSL 5 BASIC12.32□□□□□ -0.44
Rnf13O54965 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf13O54965 Ciz1-203ENSMUST00000113332 2973 ntAPPRIS ALT2 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf13O54965 Tfap2c-202ENSMUST00000099058 2985 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf13O54965 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf13O54965 Kmt5b-205ENSMUST00000113972 4159 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Rnf13O54965 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.32□□□□□ -0.44
Rnf13O54965 Myh7-204ENSMUST00000168485 6230 ntAPPRIS P1 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf13O54965 Lrig2-201ENSMUST00000046316 7099 ntAPPRIS P3 TSL 1 (best) BASIC12.32□□□□□ -0.44
Rnf13O54965 Egr3-204ENSMUST00000225200 3940 ntAPPRIS P2 BASIC12.31□□□□□ -0.44
Rnf13O54965 Igf2r-201ENSMUST00000024599 8887 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf13O54965 Fam222b-201ENSMUST00000073705 3258 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf13O54965 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf13O54965 Trpm4-201ENSMUST00000042194 4234 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf13O54965 Zmynd15-202ENSMUST00000092958 2100 ntAPPRIS ALT2 TSL 5 BASIC12.31□□□□□ -0.44
Rnf13O54965 Scarf1-201ENSMUST00000042808 2887 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf13O54965 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf13O54965 Esr2-201ENSMUST00000076634 3288 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf13O54965 Dhdds-202ENSMUST00000105885 998 ntTSL 5 BASIC12.31□□□□□ -0.44
Rnf13O54965 Izumo1r-203ENSMUST00000117620 1095 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf13O54965 Gm18889-201ENSMUST00000174284 929 ntBASIC12.31□□□□□ -0.44
Rnf13O54965 Fahd2a-201ENSMUST00000028848 1211 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf13O54965 Lce1g-201ENSMUST00000029527 925 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf13O54965 March3-201ENSMUST00000035278 860 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Rnf13O54965 Spr-201ENSMUST00000045986 1230 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf13O54965 Thoc7-201ENSMUST00000065865 937 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf13O54965 Mir497b-201ENSMUST00000093601 125 ntBASIC12.31□□□□□ -0.44
Rnf13O54965 Crxos-201ENSMUST00000098801 934 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf13O54965 Cacna1g-208ENSMUST00000107790 8035 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf13O54965 Rcsd1-202ENSMUST00000097474 5001 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf13O54965 Pcdhgc3-201ENSMUST00000076807 4687 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf13O54965 Rinl-201ENSMUST00000059857 2871 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf13O54965 Vrtn-202ENSMUST00000166772 3098 ntAPPRIS P1 TSL 3 BASIC12.31□□□□□ -0.44
Rnf13O54965 Irak3-201ENSMUST00000020448 3097 ntAPPRIS P1 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf13O54965 Gabpb1-202ENSMUST00000089745 3254 ntTSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf13O54965 C77080-203ENSMUST00000106051 5049 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf13O54965 C77080-202ENSMUST00000097873 5033 ntAPPRIS ALT2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf13O54965 Clcn6-201ENSMUST00000030879 3306 ntAPPRIS P2 TSL 1 (best) BASIC12.31□□□□□ -0.44
Rnf13O54965 Pltp-202ENSMUST00000109316 2226 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf13O54965 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf13O54965 Zbtb1-201ENSMUST00000042779 12190 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf13O54965 Araf-203ENSMUST00000122312 2854 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf13O54965 Gm10305-201ENSMUST00000195331 2475 ntBASIC12.3□□□□□ -0.44
Rnf13O54965 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf13O54965 Cacna1c-225ENSMUST00000219223 7483 ntTSL 5 BASIC12.3□□□□□ -0.44
Rnf13O54965 Nwd2-201ENSMUST00000159584 8534 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf13O54965 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC12.3□□□□□ -0.44
Rnf13O54965 Atxn7l3b-201ENSMUST00000099276 3566 ntAPPRIS P1 BASIC12.3□□□□□ -0.44
Rnf13O54965 Pcbp3-203ENSMUST00000105411 2544 ntAPPRIS ALT2 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf13O54965 Mettl23-201ENSMUST00000106370 1276 ntAPPRIS P1 TSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf13O54965 Mir1895-201ENSMUST00000122615 79 ntBASIC12.3□□□□□ -0.44
Rnf13O54965 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.3□□□□□ -0.44
Rnf13O54965 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Rnf13O54965 Atp6v0b-208ENSMUST00000150204 935 ntTSL 5 BASIC12.3□□□□□ -0.44
Rnf13O54965 Smim17-203ENSMUST00000161855 664 ntAPPRIS P1 TSL 3 BASIC12.3□□□□□ -0.44
Retrieved 100 of 76,532 protein–RNA pairs in 49.5 ms