Protein–RNA interactions for Protein: O54949

Nlk, Serine/threonine-protein kinase NLK, mousemouse

Predictions only

Length 527 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NlkO54949 Kcnn1-204ENSMUST00000212086 2964 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
NlkO54949 Cyth1-203ENSMUST00000106302 3119 ntAPPRIS P4 TSL 1 (best) BASIC12.16□□□□□ -0.46
NlkO54949 Ubap2l-202ENSMUST00000064639 4073 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NlkO54949 Cdcp2-202ENSMUST00000221740 1623 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
NlkO54949 BC026585-201ENSMUST00000046743 1618 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NlkO54949 Ibtk-201ENSMUST00000039213 5650 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NlkO54949 Cplx4-201ENSMUST00000025397 1751 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NlkO54949 Nfya-203ENSMUST00000159063 1255 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NlkO54949 Sirpa-213ENSMUST00000163034 677 ntTSL 3 BASIC12.16□□□□□ -0.46
NlkO54949 Dpf3-205ENSMUST00000177801 1092 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NlkO54949 Ndufs6-203ENSMUST00000222930 512 ntTSL 3 BASIC12.16□□□□□ -0.46
NlkO54949 Lrif1-202ENSMUST00000098751 929 ntTSL 2 BASIC12.16□□□□□ -0.46
NlkO54949 Pcp2-202ENSMUST00000128566 1447 ntAPPRIS ALT2 TSL 2 BASIC12.16□□□□□ -0.46
NlkO54949 Bcl7a-201ENSMUST00000031391 4718 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NlkO54949 Dgcr14-201ENSMUST00000003621 2819 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NlkO54949 Gm4981-201ENSMUST00000099726 1854 ntAPPRIS P1 BASIC12.16□□□□□ -0.46
NlkO54949 Fermt2-201ENSMUST00000045905 3293 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NlkO54949 Kdm2b-204ENSMUST00000118027 5062 ntAPPRIS ALT2 TSL 5 BASIC12.16□□□□□ -0.46
NlkO54949 Csnk1a1-202ENSMUST00000163205 3204 ntAPPRIS ALT1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NlkO54949 Psd-210ENSMUST00000225323 3398 ntAPPRIS ALT2 BASIC12.16□□□□□ -0.46
NlkO54949 Pycrl-201ENSMUST00000053918 1353 ntAPPRIS P1 TSL 1 (best) BASIC12.16□□□□□ -0.46
NlkO54949 Nfic-207ENSMUST00000221817 1531 ntTSL 5 BASIC12.16□□□□□ -0.46
NlkO54949 Disp2-202ENSMUST00000063975 1505 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NlkO54949 4930556H04Rik-201ENSMUST00000222451 1675 ntBASIC12.16□□□□□ -0.46
NlkO54949 Etl4-201ENSMUST00000045555 5931 ntAPPRIS ALT2 TSL 1 (best) BASIC12.16□□□□□ -0.46
NlkO54949 Prrx1-204ENSMUST00000174397 6527 ntTSL 1 (best) BASIC12.16□□□□□ -0.46
NlkO54949 2810403A07Rik-201ENSMUST00000029696 2981 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NlkO54949 Tmem206-201ENSMUST00000027940 2246 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NlkO54949 Lmntd2-201ENSMUST00000026573 2095 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
NlkO54949 Olfr279-202ENSMUST00000205772 5330 ntAPPRIS P1 TSL 3 BASIC12.15□□□□□ -0.46
NlkO54949 Sfn-201ENSMUST00000057311 1613 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
NlkO54949 Mdh2-201ENSMUST00000019323 1456 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NlkO54949 Fosb-207ENSMUST00000208505 3523 ntTSL 5 BASIC12.15□□□□□ -0.46
NlkO54949 Gm13814-201ENSMUST00000141341 3077 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NlkO54949 Per2-201ENSMUST00000069620 5833 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NlkO54949 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NlkO54949 AC125108.1-201ENSMUST00000218986 2330 ntBASIC12.15□□□□□ -0.46
NlkO54949 Snx13-201ENSMUST00000048519 6231 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NlkO54949 Fbxo25-201ENSMUST00000043520 2012 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
NlkO54949 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC12.15□□□□□ -0.46
NlkO54949 Ptcd2-201ENSMUST00000022153 1704 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NlkO54949 Spo11-201ENSMUST00000050442 1709 ntAPPRIS P3 TSL 1 (best) BASIC12.15□□□□□ -0.46
NlkO54949 Egfl6-201ENSMUST00000000412 2704 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NlkO54949 Ncln-201ENSMUST00000020463 3118 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
NlkO54949 Oprl1-203ENSMUST00000108766 1241 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NlkO54949 Ms4a6d-202ENSMUST00000125291 679 ntTSL 3 BASIC12.15□□□□□ -0.46
NlkO54949 Gm16163-201ENSMUST00000161868 1119 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NlkO54949 Arfgap1-213ENSMUST00000184394 1209 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
NlkO54949 Prr29-205ENSMUST00000190268 1141 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.46
NlkO54949 Gm43073-201ENSMUST00000198200 1189 ntBASIC12.15□□□□□ -0.46
NlkO54949 Slc12a5-208ENSMUST00000202479 1202 ntTSL 5 BASIC12.15□□□□□ -0.46
NlkO54949 Gm34964-201ENSMUST00000207398 417 ntTSL 5 BASIC12.15□□□□□ -0.46
NlkO54949 Gm45706-201ENSMUST00000213063 2136 ntBASIC12.15□□□□□ -0.46
NlkO54949 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NlkO54949 Zfp707-201ENSMUST00000109966 1803 ntAPPRIS ALT2 TSL 1 (best) BASIC12.15□□□□□ -0.46
NlkO54949 Miip-201ENSMUST00000030886 1813 ntAPPRIS P2 TSL 1 (best) BASIC12.15□□□□□ -0.46
NlkO54949 Prss44-201ENSMUST00000098345 1838 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NlkO54949 Ocrl-203ENSMUST00000115020 3210 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NlkO54949 Rspo2-203ENSMUST00000226810 3091 ntAPPRIS P1 BASIC12.15□□□□□ -0.46
NlkO54949 Got1-201ENSMUST00000026196 2058 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NlkO54949 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NlkO54949 Gm13332-201ENSMUST00000120451 1398 ntBASIC12.15□□□□□ -0.46
NlkO54949 Epb41l5-208ENSMUST00000191046 6870 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NlkO54949 Gm34016-201ENSMUST00000222678 1384 ntTSL 1 (best) BASIC12.15□□□□□ -0.46
NlkO54949 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC12.15□□□□□ -0.46
NlkO54949 Ddx19b-202ENSMUST00000065784 3104 ntTSL 1 (best) BASIC12.15□□□□□ -0.47
NlkO54949 Tmem230-203ENSMUST00000110164 2957 ntAPPRIS P1 TSL 2 BASIC12.15□□□□□ -0.47
NlkO54949 Trim26-210ENSMUST00000179968 3203 ntAPPRIS ALT2 TSL 5 BASIC12.15□□□□□ -0.47
NlkO54949 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
NlkO54949 Mcph1-201ENSMUST00000039412 4662 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NlkO54949 Nfya-212ENSMUST00000162460 3706 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
NlkO54949 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NlkO54949 Osr2-201ENSMUST00000022952 1724 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NlkO54949 Gm42934-201ENSMUST00000196920 1345 ntBASIC12.14□□□□□ -0.47
NlkO54949 Tgm1-201ENSMUST00000002389 2791 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NlkO54949 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NlkO54949 Gm26576-201ENSMUST00000181018 1977 ntTSL 5 BASIC12.14□□□□□ -0.47
NlkO54949 Spin1-201ENSMUST00000095797 4434 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
NlkO54949 Arhgef37-201ENSMUST00000171629 3234 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
NlkO54949 Pde7b-202ENSMUST00000164195 1665 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
NlkO54949 Wnt9a-201ENSMUST00000000128 3320 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
NlkO54949 Arhgef2-219ENSMUST00000176500 4492 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
NlkO54949 Trav3-1-201ENSMUST00000103569 385 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
NlkO54949 Trav3-4-201ENSMUST00000103670 458 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
NlkO54949 Dnajc8-205ENSMUST00000105939 746 ntTSL 5 BASIC12.14□□□□□ -0.47
NlkO54949 Gm2810-201ENSMUST00000118681 990 ntBASIC12.14□□□□□ -0.47
NlkO54949 Mmab-203ENSMUST00000123256 1277 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NlkO54949 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NlkO54949 Gm11201-201ENSMUST00000143473 701 ntTSL 3 BASIC12.14□□□□□ -0.47
NlkO54949 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.14□□□□□ -0.47
NlkO54949 Gm37935-201ENSMUST00000192012 982 ntBASIC12.14□□□□□ -0.47
NlkO54949 Gm37230-201ENSMUST00000194491 818 ntBASIC12.14□□□□□ -0.47
NlkO54949 Gm33785-201ENSMUST00000222961 886 ntTSL 5 BASIC12.14□□□□□ -0.47
NlkO54949 Olfr324-201ENSMUST00000054683 1122 ntAPPRIS P2 BASIC12.14□□□□□ -0.47
NlkO54949 Gm9898-201ENSMUST00000065469 1161 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
NlkO54949 Adrb3-201ENSMUST00000081438 2795 ntAPPRIS P2 TSL 1 (best) BASIC12.14□□□□□ -0.47
NlkO54949 Dnmt3b-208ENSMUST00000109772 4015 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
NlkO54949 Coq6-203ENSMUST00000110278 1354 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
NlkO54949 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
NlkO54949 Tmub2-205ENSMUST00000156326 2249 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 46.5 ms