Protein–RNA interactions for Protein: O08788

Dctn1, Dynactin subunit 1, mousemouse

Predictions only

Length 1,281 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Dctn1O08788 Rbfox3-205ENSMUST00000117731 3084 ntAPPRIS ALT2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Dctn1O08788 Vill-203ENSMUST00000126251 1411 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Dctn1O08788 Ccdc151-201ENSMUST00000044926 2197 ntAPPRIS P3 TSL 1 (best) BASIC16.71■□□□□ 0.27
Dctn1O08788 Stat3-201ENSMUST00000092671 2927 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Dctn1O08788 Mlx-203ENSMUST00000107303 1736 ntAPPRIS ALT1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Dctn1O08788 Abi2-201ENSMUST00000052332 5768 ntTSL 1 (best) BASIC16.71■□□□□ 0.27
Dctn1O08788 A3galt2-202ENSMUST00000106077 2114 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Dctn1O08788 Rpl3-ps2-201ENSMUST00000117131 1214 ntBASIC16.71■□□□□ 0.27
Dctn1O08788 Gm12315-201ENSMUST00000151599 911 ntTSL 3 BASIC16.71■□□□□ 0.27
Dctn1O08788 S100a14-202ENSMUST00000167598 1059 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Dctn1O08788 Gm26927-201ENSMUST00000182385 965 ntBASIC16.71■□□□□ 0.27
Dctn1O08788 Gm27243-201ENSMUST00000183964 521 ntBASIC16.71■□□□□ 0.27
Dctn1O08788 Gm5850-201ENSMUST00000192923 1206 ntBASIC16.71■□□□□ 0.27
Dctn1O08788 Crip2-206ENSMUST00000200380 864 ntTSL 3 BASIC16.71■□□□□ 0.27
Dctn1O08788 Gm45892-201ENSMUST00000212627 273 ntTSL 5 BASIC16.71■□□□□ 0.27
Dctn1O08788 Hbb-bs-201ENSMUST00000023934 628 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Dctn1O08788 Pin1rt1-201ENSMUST00000099659 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Dctn1O08788 Ylpm1-207ENSMUST00000168977 4893 ntAPPRIS ALT2 TSL 5 BASIC16.71■□□□□ 0.27
Dctn1O08788 Fam189b-203ENSMUST00000119707 2415 ntTSL 5 BASIC16.71■□□□□ 0.27
Dctn1O08788 Kpnb1-201ENSMUST00000001479 5894 ntAPPRIS P1 TSL 1 (best) BASIC16.71■□□□□ 0.27
Dctn1O08788 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC16.71■□□□□ 0.27
Dctn1O08788 Krt40-201ENSMUST00000074253 1320 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Dctn1O08788 Lrp2bp-202ENSMUST00000110380 1603 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Dctn1O08788 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Dctn1O08788 Serp1-201ENSMUST00000029385 4611 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Dctn1O08788 Syvn1-201ENSMUST00000025723 2780 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Dctn1O08788 Adam23-204ENSMUST00000114103 2655 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Dctn1O08788 Cdt1-201ENSMUST00000006760 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Dctn1O08788 Gm26565-201ENSMUST00000181642 1968 ntTSL 5 BASIC16.7■□□□□ 0.26
Dctn1O08788 E230013L22Rik-201ENSMUST00000180408 1856 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Dctn1O08788 5830462O15Rik-201ENSMUST00000214603 1655 ntBASIC16.7■□□□□ 0.26
Dctn1O08788 Heg1-205ENSMUST00000152782 8161 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Dctn1O08788 Thoc6-204ENSMUST00000115490 1157 ntTSL 5 BASIC16.7■□□□□ 0.26
Dctn1O08788 Gm14350-201ENSMUST00000116642 640 ntBASIC16.7■□□□□ 0.26
Dctn1O08788 Gm13350-201ENSMUST00000120519 479 ntBASIC16.7■□□□□ 0.26
Dctn1O08788 Ablim2-213ENSMUST00000150146 415 ntTSL 2 BASIC16.7■□□□□ 0.26
Dctn1O08788 Egfl7-211ENSMUST00000152988 723 ntTSL 2 BASIC16.7■□□□□ 0.26
Dctn1O08788 Gm17344-201ENSMUST00000171173 1159 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Dctn1O08788 Gm37933-201ENSMUST00000193964 981 ntTSL 1 (best) BASIC16.7■□□□□ 0.26
Dctn1O08788 Gm44064-201ENSMUST00000204964 1087 ntBASIC16.7■□□□□ 0.26
Dctn1O08788 Eaf2-201ENSMUST00000023537 849 ntAPPRIS ALT2 TSL 5 BASIC16.7■□□□□ 0.26
Dctn1O08788 Ndufb3-201ENSMUST00000027193 763 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Dctn1O08788 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC16.7■□□□□ 0.26
Dctn1O08788 Tas2r137-201ENSMUST00000064932 1073 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Dctn1O08788 Ccne2-202ENSMUST00000108324 2908 ntAPPRIS P4 TSL 1 (best) BASIC16.7■□□□□ 0.26
Dctn1O08788 Hspa1a-201ENSMUST00000087328 2967 ntAPPRIS P1 BASIC16.7■□□□□ 0.26
Dctn1O08788 Rbm26-201ENSMUST00000022715 3633 ntTSL 5 BASIC16.7■□□□□ 0.26
Dctn1O08788 Gm43697-201ENSMUST00000199637 2581 ntBASIC16.7■□□□□ 0.26
Dctn1O08788 Me2-201ENSMUST00000025439 2455 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Dctn1O08788 Kif11-201ENSMUST00000012587 4819 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Dctn1O08788 Oasl1-202ENSMUST00000112143 2181 ntAPPRIS P1 TSL 1 (best) BASIC16.7■□□□□ 0.26
Dctn1O08788 Rassf5-203ENSMUST00000112442 3388 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Dctn1O08788 Zscan2-201ENSMUST00000044115 2310 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Dctn1O08788 Myo1c-204ENSMUST00000108431 4718 ntAPPRIS P2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Dctn1O08788 Gm45684-201ENSMUST00000210244 1571 ntBASIC16.69■□□□□ 0.26
Dctn1O08788 Napsa-201ENSMUST00000002274 1560 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Dctn1O08788 Cc2d1b-201ENSMUST00000030320 3303 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Dctn1O08788 Olfm1-202ENSMUST00000100244 2686 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Dctn1O08788 Mast2-201ENSMUST00000003908 5445 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Dctn1O08788 Pole-203ENSMUST00000112482 747 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Dctn1O08788 Gm11618-201ENSMUST00000117946 267 ntBASIC16.69■□□□□ 0.26
Dctn1O08788 Gm12349-201ENSMUST00000153030 657 ntTSL 3 BASIC16.69■□□□□ 0.26
Dctn1O08788 Gm20033-203ENSMUST00000180912 796 ntTSL 5 BASIC16.69■□□□□ 0.26
Dctn1O08788 Gm38266-201ENSMUST00000194931 421 ntBASIC16.69■□□□□ 0.26
Dctn1O08788 Gm43133-201ENSMUST00000197472 463 ntBASIC16.69■□□□□ 0.26
Dctn1O08788 Hax1-207ENSMUST00000198782 855 ntAPPRIS ALT2 TSL 5 BASIC16.69■□□□□ 0.26
Dctn1O08788 Atp6v0c-ps1-201ENSMUST00000206596 463 ntBASIC16.69■□□□□ 0.26
Dctn1O08788 Leap2-201ENSMUST00000036045 531 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Dctn1O08788 Ccl24-201ENSMUST00000004936 1295 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Dctn1O08788 Map2k7-203ENSMUST00000110994 1600 ntTSL 1 (best) BASIC16.69■□□□□ 0.26
Dctn1O08788 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC16.69■□□□□ 0.26
Dctn1O08788 Scg2-201ENSMUST00000049972 2515 ntAPPRIS P1 TSL 2 BASIC16.69■□□□□ 0.26
Dctn1O08788 Rgs6-208ENSMUST00000186458 5588 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Dctn1O08788 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Dctn1O08788 Gm12500-202ENSMUST00000186471 2428 ntBASIC16.69■□□□□ 0.26
Dctn1O08788 Gm45338-207ENSMUST00000211499 1405 ntTSL 5 BASIC16.69■□□□□ 0.26
Dctn1O08788 Iffo1-202ENSMUST00000119527 2840 ntAPPRIS ALT2 TSL 1 (best) BASIC16.69■□□□□ 0.26
Dctn1O08788 Ints14-201ENSMUST00000037504 2837 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Dctn1O08788 Foxa1-201ENSMUST00000044380 3191 ntAPPRIS P1 TSL 1 (best) BASIC16.69■□□□□ 0.26
Dctn1O08788 Rasgrp2-208ENSMUST00000113476 2296 ntAPPRIS P1 TSL 5 BASIC16.68■□□□□ 0.26
Dctn1O08788 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Dctn1O08788 Bid-201ENSMUST00000004560 2189 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Dctn1O08788 Tbc1d4-210ENSMUST00000162617 4762 ntAPPRIS ALT2 TSL 5 BASIC16.68■□□□□ 0.26
Dctn1O08788 C2cd2l-201ENSMUST00000065080 4337 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Dctn1O08788 Gm18630-201ENSMUST00000222109 1397 ntBASIC16.68■□□□□ 0.26
Dctn1O08788 Pdcd6-203ENSMUST00000222759 1376 ntAPPRIS ALT1 TSL 2 BASIC16.68■□□□□ 0.26
Dctn1O08788 Abhd6-203ENSMUST00000225234 1958 ntBASIC16.68■□□□□ 0.26
Dctn1O08788 Adora2a-201ENSMUST00000105420 2596 ntAPPRIS P1 TSL 3 BASIC16.68■□□□□ 0.26
Dctn1O08788 Smpd2-201ENSMUST00000019965 1602 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Dctn1O08788 Gtf2a1l-201ENSMUST00000024970 1621 ntAPPRIS P1 TSL 1 (best) BASIC16.68■□□□□ 0.26
Dctn1O08788 Iah1-204ENSMUST00000223345 1890 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Dctn1O08788 D930015M05Rik-201ENSMUST00000126002 1190 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Dctn1O08788 Cd180-203ENSMUST00000170878 842 ntTSL 3 BASIC16.68■□□□□ 0.26
Dctn1O08788 Cd180-205ENSMUST00000172138 518 ntTSL 2 BASIC16.68■□□□□ 0.26
Dctn1O08788 Gm25927-201ENSMUST00000175058 117 ntBASIC16.68■□□□□ 0.26
Dctn1O08788 Zfp709-202ENSMUST00000188374 717 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Dctn1O08788 2010106C02Rik-201ENSMUST00000191222 660 ntTSL 1 (best) BASIC16.68■□□□□ 0.26
Dctn1O08788 2610300A13Rik-201ENSMUST00000192930 503 ntBASIC16.68■□□□□ 0.26
Dctn1O08788 Dnajb6-210ENSMUST00000196528 1018 ntTSL 5 BASIC16.68■□□□□ 0.26
Dctn1O08788 Gm3961-201ENSMUST00000204425 994 ntBASIC16.68■□□□□ 0.26
Retrieved 100 of 76,532 protein–RNA pairs in 50.2 ms