Protein–RNA interactions for Protein: G3X9Z4

Pcf11, Cleavage and polyadenylation factor subunit homolog (S. cerevisiae), mousemouse

Predictions only

Length 1,553 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcf11G3X9Z4 Gm29585-203ENSMUST00000188089 835 ntTSL 5 BASIC20.23■□□□□ 0.83
Pcf11G3X9Z4 Gpihbp1-203ENSMUST00000189874 1652 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcf11G3X9Z4 Gm28511-201ENSMUST00000191594 450 ntTSL 3 BASIC20.23■□□□□ 0.83
Pcf11G3X9Z4 Gm44775-201ENSMUST00000207266 1456 ntBASIC20.23■□□□□ 0.83
Pcf11G3X9Z4 Pnrc2-201ENSMUST00000030436 1919 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcf11G3X9Z4 Tspan8-201ENSMUST00000035563 1244 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcf11G3X9Z4 Actc1-201ENSMUST00000090269 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcf11G3X9Z4 Glyr1-202ENSMUST00000115844 3348 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcf11G3X9Z4 Glyr1-201ENSMUST00000023189 3330 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
Pcf11G3X9Z4 Jun-201ENSMUST00000107094 3189 ntAPPRIS P1 BASIC20.23■□□□□ 0.83
Pcf11G3X9Z4 Diaph1-205ENSMUST00000115634 5666 ntAPPRIS P3 TSL 5 BASIC20.23■□□□□ 0.83
Pcf11G3X9Z4 1700037C18Rik-202ENSMUST00000115859 2592 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcf11G3X9Z4 Rbbp5-206ENSMUST00000190825 2456 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcf11G3X9Z4 Tars2-202ENSMUST00000074339 2313 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcf11G3X9Z4 Ccdc155-201ENSMUST00000121017 2262 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Pcf11G3X9Z4 Cdk12-203ENSMUST00000107539 5912 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Pcf11G3X9Z4 Nanos1-201ENSMUST00000088237 3927 ntAPPRIS P1 BASIC20.22■□□□□ 0.83
Pcf11G3X9Z4 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcf11G3X9Z4 Map2k7-202ENSMUST00000062686 3525 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcf11G3X9Z4 Gm38157-201ENSMUST00000194178 1698 ntBASIC20.22■□□□□ 0.83
Pcf11G3X9Z4 Wdr25-206ENSMUST00000221510 1600 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcf11G3X9Z4 Ddx51-201ENSMUST00000031478 4846 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcf11G3X9Z4 Acoxl-202ENSMUST00000110344 1573 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcf11G3X9Z4 Fbrsl1-202ENSMUST00000069483 4720 ntAPPRIS P2 TSL 5 BASIC20.22■□□□□ 0.83
Pcf11G3X9Z4 Rfx7-203ENSMUST00000183372 1457 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcf11G3X9Z4 Myh10-204ENSMUST00000108673 1315 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcf11G3X9Z4 Tnnt3-217ENSMUST00000105957 1028 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Pcf11G3X9Z4 Gm15479-201ENSMUST00000139309 1133 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcf11G3X9Z4 1700065D16Rik-203ENSMUST00000189279 393 ntTSL 2 BASIC20.22■□□□□ 0.83
Pcf11G3X9Z4 Gm7118-201ENSMUST00000200167 1003 ntBASIC20.22■□□□□ 0.83
Pcf11G3X9Z4 Gm29683-203ENSMUST00000209071 2488 ntTSL 1 (best) BASIC20.22■□□□□ 0.83
Pcf11G3X9Z4 Gm26702-201ENSMUST00000181730 4570 ntTSL 5 BASIC20.22■□□□□ 0.83
Pcf11G3X9Z4 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcf11G3X9Z4 Kif7-201ENSMUST00000059836 4521 ntAPPRIS P3 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcf11G3X9Z4 Nr4a2-203ENSMUST00000112629 3422 ntAPPRIS P1 TSL 5 BASIC20.22■□□□□ 0.83
Pcf11G3X9Z4 Ppp4r3a-202ENSMUST00000163095 4083 ntTSL 5 BASIC20.22■□□□□ 0.83
Pcf11G3X9Z4 Chchd3-201ENSMUST00000066379 1550 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcf11G3X9Z4 Id4-201ENSMUST00000021810 3849 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcf11G3X9Z4 Zbtb7b-204ENSMUST00000107435 4333 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Pcf11G3X9Z4 Midn-202ENSMUST00000099492 3597 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
Pcf11G3X9Z4 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC20.21■□□□□ 0.83
Pcf11G3X9Z4 Tshr-201ENSMUST00000021343 1339 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcf11G3X9Z4 Ssbp2-201ENSMUST00000004094 3957 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcf11G3X9Z4 Prr13-204ENSMUST00000164957 1055 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcf11G3X9Z4 Hax1-206ENSMUST00000197786 857 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcf11G3X9Z4 Fxyd1-217ENSMUST00000206860 594 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Pcf11G3X9Z4 Fam168a-206ENSMUST00000208013 1129 ntTSL 5 BASIC20.21■□□□□ 0.83
Pcf11G3X9Z4 Ifi30-202ENSMUST00000222087 981 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcf11G3X9Z4 Fmr1nb-202ENSMUST00000071848 842 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcf11G3X9Z4 Coil-202ENSMUST00000107898 3120 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Pcf11G3X9Z4 Stard5-201ENSMUST00000075418 2483 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcf11G3X9Z4 Gm28386-201ENSMUST00000189147 1849 ntBASIC20.21■□□□□ 0.83
Pcf11G3X9Z4 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC20.21■□□□□ 0.83
Pcf11G3X9Z4 Rxrg-202ENSMUST00000111380 1630 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcf11G3X9Z4 Gm28590-201ENSMUST00000185679 1609 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcf11G3X9Z4 Fetub-201ENSMUST00000023587 1573 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcf11G3X9Z4 Slc4a1ap-213ENSMUST00000202950 2499 ntAPPRIS ALT2 TSL 5 BASIC20.21■□□□□ 0.83
Pcf11G3X9Z4 Cd74-202ENSMUST00000097563 1410 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcf11G3X9Z4 Large1-204ENSMUST00000212459 4746 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcf11G3X9Z4 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcf11G3X9Z4 Dnm1-217ENSMUST00000202578 2820 ntAPPRIS P2 TSL 5 BASIC20.21■□□□□ 0.83
Pcf11G3X9Z4 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcf11G3X9Z4 Rnf214-205ENSMUST00000160699 2287 ntAPPRIS P3 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcf11G3X9Z4 Rab11fip4-201ENSMUST00000017783 7156 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcf11G3X9Z4 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcf11G3X9Z4 Zbtb14-203ENSMUST00000112676 3909 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcf11G3X9Z4 Pdcl3-201ENSMUST00000027247 3914 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcf11G3X9Z4 Ddx4-202ENSMUST00000099166 3012 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcf11G3X9Z4 Gm2606-201ENSMUST00000100754 1002 ntBASIC20.21■□□□□ 0.83
Pcf11G3X9Z4 Gm14381-201ENSMUST00000122105 414 ntBASIC20.21■□□□□ 0.83
Pcf11G3X9Z4 C030017D09Rik-201ENSMUST00000163690 923 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
Pcf11G3X9Z4 U2af1l4-215ENSMUST00000166257 546 ntTSL 5 BASIC20.21■□□□□ 0.83
Pcf11G3X9Z4 Gm2310-201ENSMUST00000179217 1131 ntAPPRIS P1 TSL 5 BASIC20.21■□□□□ 0.83
Pcf11G3X9Z4 Gm9061-201ENSMUST00000182707 1006 ntBASIC20.21■□□□□ 0.83
Pcf11G3X9Z4 Gm35409-201ENSMUST00000196412 1102 ntTSL 5 BASIC20.21■□□□□ 0.83
Pcf11G3X9Z4 Gm7293-201ENSMUST00000216682 1007 ntBASIC20.21■□□□□ 0.83
Pcf11G3X9Z4 AC135669.1-202ENSMUST00000216742 540 ntBASIC20.21■□□□□ 0.83
Pcf11G3X9Z4 AC132317.1-201ENSMUST00000227227 962 ntBASIC20.21■□□□□ 0.83
Pcf11G3X9Z4 1700029I15Rik-201ENSMUST00000054316 364 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcf11G3X9Z4 Cma2-201ENSMUST00000089555 947 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcf11G3X9Z4 Pnpla5-201ENSMUST00000019012 1694 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
Pcf11G3X9Z4 Adgrd2-ps-201ENSMUST00000118797 2662 ntBASIC20.2■□□□□ 0.82
Pcf11G3X9Z4 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcf11G3X9Z4 1110034G24Rik-202ENSMUST00000110132 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcf11G3X9Z4 Olfr649-202ENSMUST00000106859 1382 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
Pcf11G3X9Z4 Gm10729-202ENSMUST00000193403 1375 ntBASIC20.2■□□□□ 0.82
Pcf11G3X9Z4 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC20.2■□□□□ 0.82
Pcf11G3X9Z4 Igf1-203ENSMUST00000105300 1673 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcf11G3X9Z4 Gm33195-201ENSMUST00000220827 2337 ntTSL 5 BASIC20.2■□□□□ 0.82
Pcf11G3X9Z4 Adh6a-202ENSMUST00000106247 1341 ntAPPRIS P2 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcf11G3X9Z4 Slc25a22-223ENSMUST00000201710 2565 ntAPPRIS P1 TSL 5 BASIC20.2■□□□□ 0.82
Pcf11G3X9Z4 Qdpr-202ENSMUST00000117425 1231 ntTSL 3 BASIC20.2■□□□□ 0.82
Pcf11G3X9Z4 Gm13875-201ENSMUST00000120162 282 ntBASIC20.2■□□□□ 0.82
Pcf11G3X9Z4 1700003G18Rik-201ENSMUST00000140689 633 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
Pcf11G3X9Z4 Gm20482-202ENSMUST00000174729 825 ntBASIC20.2■□□□□ 0.82
Pcf11G3X9Z4 Gm8176-201ENSMUST00000191297 1099 ntBASIC20.2■□□□□ 0.82
Pcf11G3X9Z4 Gm30285-201ENSMUST00000214614 422 ntBASIC20.2■□□□□ 0.82
Pcf11G3X9Z4 Gm6082-201ENSMUST00000215204 454 ntBASIC20.2■□□□□ 0.82
Pcf11G3X9Z4 Rps3a1-201ENSMUST00000029722 977 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
Pcf11G3X9Z4 Gm3402-201ENSMUST00000036715 981 ntAPPRIS ALT2 TSL 5 BASIC20.2■□□□□ 0.82
Retrieved 100 of 76,532 protein–RNA pairs in 53.2 ms