Protein–RNA interactions for Protein: D3YU81

Rfx8, DNA-binding protein RFX8, mousemouse

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Rfx8D3YU81 Car5a-201ENSMUST00000057653 1249 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfx8D3YU81 Tmem139-201ENSMUST00000095987 1147 ntAPPRIS P1 TSL 2 BASIC14.42□□□□□ -0.1
Rfx8D3YU81 Znrf1-203ENSMUST00000168428 4451 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfx8D3YU81 Ctgf-201ENSMUST00000020171 2398 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfx8D3YU81 Lpar2-202ENSMUST00000164890 5800 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfx8D3YU81 Msantd3-201ENSMUST00000061135 1589 ntAPPRIS P1 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfx8D3YU81 Mtmr2-208ENSMUST00000155679 3088 ntTSL 5 BASIC14.42□□□□□ -0.1
Rfx8D3YU81 Kyat1-205ENSMUST00000113662 1850 ntAPPRIS P1 TSL 5 BASIC14.42□□□□□ -0.1
Rfx8D3YU81 B430212C06Rik-205ENSMUST00000145081 2623 ntTSL 1 (best) BASIC14.42□□□□□ -0.1
Rfx8D3YU81 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.42□□□□□ -0.1
Rfx8D3YU81 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC14.42□□□□□ -0.1
Rfx8D3YU81 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.42□□□□□ -0.1
Rfx8D3YU81 5330406M23Rik-201ENSMUST00000195672 2094 ntBASIC14.42□□□□□ -0.1
Rfx8D3YU81 4933430H06Rik-201ENSMUST00000200924 1343 ntBASIC14.41□□□□□ -0.1
Rfx8D3YU81 Prss22-201ENSMUST00000041649 1323 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx8D3YU81 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx8D3YU81 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx8D3YU81 Col6a2-202ENSMUST00000105413 4653 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx8D3YU81 Galnt17-201ENSMUST00000086023 8040 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx8D3YU81 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Rfx8D3YU81 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx8D3YU81 Ace-202ENSMUST00000001964 2418 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx8D3YU81 Parp16-202ENSMUST00000213396 2518 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx8D3YU81 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.41□□□□□ -0.1
Rfx8D3YU81 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx8D3YU81 Mrps17-202ENSMUST00000118420 843 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Rfx8D3YU81 Snap47-202ENSMUST00000120940 1192 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx8D3YU81 Pigyl-201ENSMUST00000123680 695 ntAPPRIS P1 TSL 2 BASIC14.41□□□□□ -0.1
Rfx8D3YU81 Hoxd8-203ENSMUST00000151380 557 ntAPPRIS ALT2 TSL 2 BASIC14.41□□□□□ -0.1
Rfx8D3YU81 Esd-207ENSMUST00000176957 1117 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx8D3YU81 AC153937.4-201ENSMUST00000218479 661 ntTSL 3 BASIC14.41□□□□□ -0.1
Rfx8D3YU81 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC14.41□□□□□ -0.1
Rfx8D3YU81 Gm19220-201ENSMUST00000222682 803 ntBASIC14.41□□□□□ -0.1
Rfx8D3YU81 Bpifa6-201ENSMUST00000109753 1572 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx8D3YU81 Higd1a-205ENSMUST00000215007 1980 ntTSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx8D3YU81 Pla2g5-204ENSMUST00000102513 2289 ntAPPRIS P1 TSL 5 BASIC14.41□□□□□ -0.1
Rfx8D3YU81 Bhmt-201ENSMUST00000099309 2490 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx8D3YU81 Metap2-206ENSMUST00000180840 2551 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx8D3YU81 Hspb7-201ENSMUST00000102486 2769 ntAPPRIS P1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx8D3YU81 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx8D3YU81 Atg16l1-202ENSMUST00000113186 3004 ntAPPRIS ALT1 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx8D3YU81 AC121805.2-201ENSMUST00000218808 2538 ntBASIC14.41□□□□□ -0.1
Rfx8D3YU81 Gm34376-201ENSMUST00000218529 2107 ntTSL 5 BASIC14.41□□□□□ -0.1
Rfx8D3YU81 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC14.41□□□□□ -0.1
Rfx8D3YU81 Dnmt3b-206ENSMUST00000103151 3956 ntAPPRIS ALT2 TSL 1 (best) BASIC14.41□□□□□ -0.1
Rfx8D3YU81 Cnnm2-202ENSMUST00000099373 3558 ntAPPRIS P4 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx8D3YU81 Cul5-209ENSMUST00000166367 5942 ntTSL 5 BASIC14.4□□□□□ -0.1
Rfx8D3YU81 Diaph2-207ENSMUST00000167619 8439 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Rfx8D3YU81 Usp16-202ENSMUST00000119504 2562 ntTSL 5 BASIC14.4□□□□□ -0.1
Rfx8D3YU81 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.4□□□□□ -0.1
Rfx8D3YU81 Adal-205ENSMUST00000119031 2477 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Rfx8D3YU81 Lypd6-201ENSMUST00000053208 3620 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx8D3YU81 Vwa3b-202ENSMUST00000067178 1769 ntAPPRIS P5 TSL 2 BASIC14.4□□□□□ -0.1
Rfx8D3YU81 Hells-201ENSMUST00000025965 5868 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx8D3YU81 Eloa-201ENSMUST00000030427 4708 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx8D3YU81 Ptx4-201ENSMUST00000054930 1582 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx8D3YU81 Cggbp1-201ENSMUST00000067744 4425 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx8D3YU81 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx8D3YU81 0610010K14Rik-205ENSMUST00000108575 643 ntTSL 2 BASIC14.4□□□□□ -0.1
Rfx8D3YU81 Gm7488-201ENSMUST00000117148 684 ntBASIC14.4□□□□□ -0.1
Rfx8D3YU81 Gm11724-201ENSMUST00000125577 472 ntTSL 2 BASIC14.4□□□□□ -0.1
Rfx8D3YU81 Gm5354-201ENSMUST00000182417 973 ntBASIC14.4□□□□□ -0.1
Rfx8D3YU81 Lce1j-202ENSMUST00000186525 703 ntAPPRIS P1 TSL 3 BASIC14.4□□□□□ -0.1
Rfx8D3YU81 Gm42612-201ENSMUST00000197986 623 ntBASIC14.4□□□□□ -0.1
Rfx8D3YU81 Gm43170-201ENSMUST00000199827 612 ntBASIC14.4□□□□□ -0.1
Rfx8D3YU81 Gm29682-201ENSMUST00000210896 1251 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx8D3YU81 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx8D3YU81 AC131997.1-201ENSMUST00000228611 1229 ntBASIC14.4□□□□□ -0.1
Rfx8D3YU81 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx8D3YU81 Pts-201ENSMUST00000034570 1046 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx8D3YU81 Ldlrad3-201ENSMUST00000058790 3833 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx8D3YU81 Pdlim7-202ENSMUST00000069929 899 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx8D3YU81 Immp2l-201ENSMUST00000080160 239 ntTSL 3 BASIC14.4□□□□□ -0.1
Rfx8D3YU81 Cacng3-201ENSMUST00000084615 2777 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx8D3YU81 B3gat1-206ENSMUST00000161431 3858 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Rfx8D3YU81 Degs2-202ENSMUST00000167978 1729 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx8D3YU81 Slco3a1-203ENSMUST00000107453 3793 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx8D3YU81 Ilvbl-208ENSMUST00000218875 3020 ntTSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx8D3YU81 Igsf9b-202ENSMUST00000133213 4239 ntAPPRIS P2 TSL 5 BASIC14.4□□□□□ -0.1
Rfx8D3YU81 Tmem215-202ENSMUST00000179526 2276 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx8D3YU81 Ctbp1-212ENSMUST00000202962 3595 ntTSL 2 BASIC14.4□□□□□ -0.1
Rfx8D3YU81 Gm37015-201ENSMUST00000192763 1521 ntBASIC14.4□□□□□ -0.1
Rfx8D3YU81 Palm2-202ENSMUST00000102905 3271 ntAPPRIS P1 TSL 5 BASIC14.4□□□□□ -0.1
Rfx8D3YU81 Gale-202ENSMUST00000102541 1430 ntAPPRIS P1 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx8D3YU81 Camta2-203ENSMUST00000108544 4632 ntAPPRIS ALT2 TSL 1 (best) BASIC14.4□□□□□ -0.1
Rfx8D3YU81 Bscl2-206ENSMUST00000160556 1795 ntAPPRIS ALT2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx8D3YU81 Tlk2-209ENSMUST00000145048 2776 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx8D3YU81 Jazf1-201ENSMUST00000074541 2203 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx8D3YU81 Eya4-206ENSMUST00000219315 3100 ntAPPRIS ALT2 TSL 5 BASIC14.39□□□□□ -0.11
Rfx8D3YU81 Rdh10-201ENSMUST00000027053 3587 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx8D3YU81 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC14.39□□□□□ -0.11
Rfx8D3YU81 Gm9947-201ENSMUST00000067599 2920 ntBASIC14.39□□□□□ -0.11
Rfx8D3YU81 Kirrel-203ENSMUST00000159976 7236 ntAPPRIS P2 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx8D3YU81 Ldb3-207ENSMUST00000227819 1499 ntBASIC14.39□□□□□ -0.11
Rfx8D3YU81 AI593442-203ENSMUST00000213937 5674 ntAPPRIS P1 TSL 2 BASIC14.39□□□□□ -0.11
Rfx8D3YU81 Nt5c2-202ENSMUST00000168536 3769 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx8D3YU81 Gorab-201ENSMUST00000045138 2538 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx8D3YU81 Mfap4-202ENSMUST00000064783 1722 ntAPPRIS P3 TSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx8D3YU81 Ncor2-203ENSMUST00000111393 8661 ntTSL 1 (best) BASIC14.39□□□□□ -0.11
Rfx8D3YU81 Nphs2-201ENSMUST00000027896 3116 ntAPPRIS P1 TSL 1 (best) BASIC14.39□□□□□ -0.11
Retrieved 100 of 76,532 protein–RNA pairs in 24.9 ms