Protein–RNA interactions for Protein: B1AYL1

Scn7a, Sodium channel protein, mousemouse

Predictions only

Length 1,681 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Scn7aB1AYL1 Cstf2-203ENSMUST00000113287 3661 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scn7aB1AYL1 Fam124a-201ENSMUST00000039064 3558 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Scn7aB1AYL1 BC037032-201ENSMUST00000140003 3974 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scn7aB1AYL1 Dag1-201ENSMUST00000080435 4364 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn7aB1AYL1 Gm36266-201ENSMUST00000196660 1749 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scn7aB1AYL1 Gm15459-201ENSMUST00000117405 1941 ntBASIC17.13■□□□□ 0.33
Scn7aB1AYL1 Gm8355-201ENSMUST00000177767 1941 ntBASIC17.13■□□□□ 0.33
Scn7aB1AYL1 Cnnm2-201ENSMUST00000077666 3492 ntAPPRIS ALT1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn7aB1AYL1 Mid1-215ENSMUST00000171433 2546 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Scn7aB1AYL1 Dbn1-203ENSMUST00000109923 2940 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn7aB1AYL1 Gm11405-201ENSMUST00000118689 1556 ntBASIC17.13■□□□□ 0.33
Scn7aB1AYL1 Ppt1-201ENSMUST00000030412 2381 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn7aB1AYL1 Sipa1-204ENSMUST00000169854 3583 ntAPPRIS P1 TSL 5 BASIC17.13■□□□□ 0.33
Scn7aB1AYL1 March8-202ENSMUST00000101032 4611 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn7aB1AYL1 Dnmt3l-205ENSMUST00000138785 1822 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn7aB1AYL1 Cyp2d26-201ENSMUST00000006094 1645 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn7aB1AYL1 Peli2-201ENSMUST00000073150 5900 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn7aB1AYL1 BB123696-201ENSMUST00000222580 2056 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scn7aB1AYL1 Myl6-202ENSMUST00000217733 1668 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scn7aB1AYL1 Rbm3-204ENSMUST00000115617 1152 ntAPPRIS P3 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn7aB1AYL1 Tspan4-202ENSMUST00000117634 1281 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn7aB1AYL1 Gm27046-201ENSMUST00000182160 463 ntBASIC17.13■□□□□ 0.33
Scn7aB1AYL1 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC17.13■□□□□ 0.33
Scn7aB1AYL1 Gm31256-201ENSMUST00000194705 506 ntBASIC17.13■□□□□ 0.33
Scn7aB1AYL1 Polr2i-201ENSMUST00000019882 819 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn7aB1AYL1 Ssc4d-201ENSMUST00000054895 1191 ntTSL 1 (best) BASIC17.13■□□□□ 0.33
Scn7aB1AYL1 Mir433-201ENSMUST00000093564 124 ntBASIC17.13■□□□□ 0.33
Scn7aB1AYL1 Slc25a18-201ENSMUST00000112682 1911 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn7aB1AYL1 Homez-202ENSMUST00000142283 4713 ntAPPRIS P1 TSL 1 (best) BASIC17.13■□□□□ 0.33
Scn7aB1AYL1 Ap4b1-201ENSMUST00000047285 2799 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn7aB1AYL1 Ebag9-201ENSMUST00000022964 1613 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn7aB1AYL1 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn7aB1AYL1 Prpf38b-201ENSMUST00000029480 3026 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn7aB1AYL1 Hsd3b3-203ENSMUST00000107018 1443 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scn7aB1AYL1 Gm7789-202ENSMUST00000211273 1400 ntBASIC17.12■□□□□ 0.33
Scn7aB1AYL1 Sik2-201ENSMUST00000041375 3552 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn7aB1AYL1 Scara3-201ENSMUST00000042046 3597 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn7aB1AYL1 Pim1-201ENSMUST00000024811 2638 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn7aB1AYL1 Cep44-201ENSMUST00000040330 1690 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn7aB1AYL1 Lrp8-201ENSMUST00000030356 4555 ntAPPRIS P5 TSL 5 BASIC17.12■□□□□ 0.33
Scn7aB1AYL1 Scg3-202ENSMUST00000213324 2152 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scn7aB1AYL1 Trim32-201ENSMUST00000050850 3194 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn7aB1AYL1 Epha1-201ENSMUST00000073387 3273 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn7aB1AYL1 Kif3a-208ENSMUST00000173744 2257 ntTSL 1 (best) BASIC17.12■□□□□ 0.33
Scn7aB1AYL1 Mkl2-203ENSMUST00000115809 667 ntTSL 2 BASIC17.12■□□□□ 0.33
Scn7aB1AYL1 Gm4760-201ENSMUST00000119663 1030 ntBASIC17.12■□□□□ 0.33
Scn7aB1AYL1 Uxt-202ENSMUST00000123836 875 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn7aB1AYL1 Mir3102-201ENSMUST00000175555 104 ntBASIC17.12■□□□□ 0.33
Scn7aB1AYL1 Gm43068-201ENSMUST00000201095 1273 ntBASIC17.12■□□□□ 0.33
Scn7aB1AYL1 Gm38979-201ENSMUST00000207099 698 ntTSL 3 BASIC17.12■□□□□ 0.33
Scn7aB1AYL1 AC158605.1-202ENSMUST00000217860 540 ntTSL 2 BASIC17.12■□□□□ 0.33
Scn7aB1AYL1 AC167229.2-201ENSMUST00000218902 675 ntTSL 5 BASIC17.12■□□□□ 0.33
Scn7aB1AYL1 Gm19605-201ENSMUST00000220603 686 ntTSL 3 BASIC17.12■□□□□ 0.33
Scn7aB1AYL1 Cym-201ENSMUST00000029504 1236 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn7aB1AYL1 Vmn1r197-201ENSMUST00000091734 897 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Scn7aB1AYL1 Usp1-201ENSMUST00000030289 3577 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn7aB1AYL1 Tmem198b-201ENSMUST00000051011 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn7aB1AYL1 Jmjd8-201ENSMUST00000026832 2091 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn7aB1AYL1 Gpr135-201ENSMUST00000050649 3150 ntAPPRIS P1 BASIC17.12■□□□□ 0.33
Scn7aB1AYL1 Kcnd3-201ENSMUST00000079169 2102 ntAPPRIS P4 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn7aB1AYL1 Islr2-205ENSMUST00000170421 4071 ntAPPRIS P3 TSL 3 BASIC17.12■□□□□ 0.33
Scn7aB1AYL1 Maea-201ENSMUST00000114449 2193 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn7aB1AYL1 Hcrtr1-203ENSMUST00000120154 2161 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn7aB1AYL1 Pkp4-210ENSMUST00000168631 4484 ntAPPRIS ALT1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn7aB1AYL1 Hpse-201ENSMUST00000045617 3117 ntAPPRIS P2 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn7aB1AYL1 Atp10a-201ENSMUST00000168747 5419 ntAPPRIS P1 TSL 1 (best) BASIC17.12■□□□□ 0.33
Scn7aB1AYL1 9130011E15Rik-201ENSMUST00000045396 2896 ntAPPRIS P1 TSL 5 BASIC17.12■□□□□ 0.33
Scn7aB1AYL1 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC17.11■□□□□ 0.33
Scn7aB1AYL1 Ttc4-201ENSMUST00000026480 2121 ntAPPRIS P2 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn7aB1AYL1 Srsf10-202ENSMUST00000097844 3055 ntAPPRIS ALT1 TSL 2 BASIC17.11■□□□□ 0.33
Scn7aB1AYL1 Fam57b-202ENSMUST00000098032 1894 ntTSL 5 BASIC17.11■□□□□ 0.33
Scn7aB1AYL1 Asic3-202ENSMUST00000196296 1593 ntAPPRIS P1 TSL 5 BASIC17.11■□□□□ 0.33
Scn7aB1AYL1 Gm7857-201ENSMUST00000117957 358 ntBASIC17.11■□□□□ 0.33
Scn7aB1AYL1 Gm13165-201ENSMUST00000152923 383 ntTSL 5 BASIC17.11■□□□□ 0.33
Scn7aB1AYL1 Gm16296-201ENSMUST00000159905 325 ntBASIC17.11■□□□□ 0.33
Scn7aB1AYL1 Gm28139-201ENSMUST00000189480 643 ntTSL 5 BASIC17.11■□□□□ 0.33
Scn7aB1AYL1 Gm42067-201ENSMUST00000209642 647 ntTSL 2 BASIC17.11■□□□□ 0.33
Scn7aB1AYL1 Gm10131-201ENSMUST00000080152 736 ntAPPRIS P1 BASIC17.11■□□□□ 0.33
Scn7aB1AYL1 Mir339-201ENSMUST00000083659 96 ntBASIC17.11■□□□□ 0.33
Scn7aB1AYL1 Pcca-201ENSMUST00000038374 2592 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn7aB1AYL1 9130017K11Rik-202ENSMUST00000135670 3338 ntTSL 1 (best) BASIC17.11■□□□□ 0.33
Scn7aB1AYL1 Trim10-201ENSMUST00000060524 2245 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn7aB1AYL1 1700029J07Rik-201ENSMUST00000095323 2740 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn7aB1AYL1 Aftph-201ENSMUST00000035350 3998 ntAPPRIS P3 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn7aB1AYL1 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC17.11■□□□□ 0.33
Scn7aB1AYL1 Magi2-206ENSMUST00000197443 6578 ntAPPRIS ALT2 TSL 5 BASIC17.1■□□□□ 0.33
Scn7aB1AYL1 Cog7-201ENSMUST00000057576 2902 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn7aB1AYL1 Ap2a2-201ENSMUST00000003038 4646 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn7aB1AYL1 Cdc26-202ENSMUST00000107459 654 ntAPPRIS P1 TSL 2 BASIC17.1■□□□□ 0.33
Scn7aB1AYL1 Gm12502-201ENSMUST00000120197 444 ntBASIC17.1■□□□□ 0.33
Scn7aB1AYL1 C230004F18Rik-203ENSMUST00000137153 2138 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scn7aB1AYL1 Gm15276-201ENSMUST00000145953 498 ntBASIC17.1■□□□□ 0.33
Scn7aB1AYL1 Hps1-204ENSMUST00000160455 2952 ntAPPRIS ALT2 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn7aB1AYL1 Gm27230-202ENSMUST00000184671 857 ntTSL 3 BASIC17.1■□□□□ 0.33
Scn7aB1AYL1 2310047D07Rik-201ENSMUST00000189493 735 ntTSL 3 BASIC17.1■□□□□ 0.33
Scn7aB1AYL1 Gm5869-201ENSMUST00000200248 1257 ntBASIC17.1■□□□□ 0.33
Scn7aB1AYL1 Erg28-201ENSMUST00000021676 1169 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn7aB1AYL1 4930562F07Rik-201ENSMUST00000028061 830 ntTSL 1 (best) BASIC17.1■□□□□ 0.33
Scn7aB1AYL1 Cryga-201ENSMUST00000061497 625 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Scn7aB1AYL1 Trmt10c-201ENSMUST00000059052 3002 ntAPPRIS P1 TSL 1 (best) BASIC17.1■□□□□ 0.33
Retrieved 100 of 76,532 protein–RNA pairs in 39.7 ms