Protein–RNA interactions for Protein: S4R1G7

H2afb3, Histone H2A, mousemouse

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
H2afb3S4R1G7 Ptprk-203ENSMUST00000218359 4669 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.44
H2afb3S4R1G7 Armcx1-205ENSMUST00000113199 2413 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.44
H2afb3S4R1G7 Smim13-201ENSMUST00000165561 4483 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
H2afb3S4R1G7 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
H2afb3S4R1G7 Uhrf1bp1-201ENSMUST00000114849 8584 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
H2afb3S4R1G7 Olfr322-202ENSMUST00000213232 4632 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
H2afb3S4R1G7 Gm10369-201ENSMUST00000100641 1148 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
H2afb3S4R1G7 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC12.27□□□□□ -0.45
H2afb3S4R1G7 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC12.27□□□□□ -0.45
H2afb3S4R1G7 Orai3-202ENSMUST00000118865 768 ntTSL 3 BASIC12.27□□□□□ -0.45
H2afb3S4R1G7 Gm15653-201ENSMUST00000119247 907 ntBASIC12.27□□□□□ -0.45
H2afb3S4R1G7 Hras-203ENSMUST00000124314 1073 ntTSL 5 BASIC12.27□□□□□ -0.45
H2afb3S4R1G7 Tmem109-207ENSMUST00000147699 1096 ntTSL 2 BASIC12.27□□□□□ -0.45
H2afb3S4R1G7 Gm25925-201ENSMUST00000158314 306 ntBASIC12.27□□□□□ -0.45
H2afb3S4R1G7 Gm7030-203ENSMUST00000173322 913 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
H2afb3S4R1G7 Ighv1-51-201ENSMUST00000192903 354 ntBASIC12.27□□□□□ -0.45
H2afb3S4R1G7 Gm7774-201ENSMUST00000200064 533 ntBASIC12.27□□□□□ -0.45
H2afb3S4R1G7 Gm6566-201ENSMUST00000221468 1171 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
H2afb3S4R1G7 AC154595.3-201ENSMUST00000224579 384 ntBASIC12.27□□□□□ -0.45
H2afb3S4R1G7 AC166997.1-201ENSMUST00000225122 572 ntBASIC12.27□□□□□ -0.45
H2afb3S4R1G7 Gm7030-201ENSMUST00000046131 913 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
H2afb3S4R1G7 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.27□□□□□ -0.45
H2afb3S4R1G7 Cenpm-201ENSMUST00000089155 1109 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
H2afb3S4R1G7 Ndufb6-201ENSMUST00000095128 659 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
H2afb3S4R1G7 Pecr-202ENSMUST00000097698 932 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
H2afb3S4R1G7 Gm16090-201ENSMUST00000130296 1704 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
H2afb3S4R1G7 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.27□□□□□ -0.45
H2afb3S4R1G7 Tom1-202ENSMUST00000165630 2267 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
H2afb3S4R1G7 Sde2-201ENSMUST00000038091 3213 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
H2afb3S4R1G7 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC12.27□□□□□ -0.45
H2afb3S4R1G7 Crhr2-209ENSMUST00000213026 1443 ntAPPRIS P2 TSL 1 (best) BASIC12.27□□□□□ -0.45
H2afb3S4R1G7 Gm8337-201ENSMUST00000187358 1938 ntBASIC12.27□□□□□ -0.45
H2afb3S4R1G7 Zscan20-202ENSMUST00000097877 5364 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
H2afb3S4R1G7 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC12.27□□□□□ -0.45
H2afb3S4R1G7 Camsap3-202ENSMUST00000171962 3925 ntAPPRIS ALT2 TSL 1 (best) BASIC12.27□□□□□ -0.45
H2afb3S4R1G7 Nlrc3-203ENSMUST00000177551 5403 ntAPPRIS P1 TSL 2 BASIC12.27□□□□□ -0.45
H2afb3S4R1G7 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb3S4R1G7 Gm14752-201ENSMUST00000120719 2075 ntBASIC12.26□□□□□ -0.45
H2afb3S4R1G7 Plekhb1-201ENSMUST00000079176 2079 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb3S4R1G7 Osbpl9-202ENSMUST00000084366 3134 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb3S4R1G7 Rnpc3-202ENSMUST00000106535 2616 ntAPPRIS ALT1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb3S4R1G7 Tsc22d3-203ENSMUST00000112996 1552 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb3S4R1G7 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb3S4R1G7 Hdac11-201ENSMUST00000041736 2653 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb3S4R1G7 Szrd1-203ENSMUST00000102487 3244 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb3S4R1G7 Canx-201ENSMUST00000020637 3779 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb3S4R1G7 Atp6ap1-201ENSMUST00000019231 2189 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb3S4R1G7 Sv2b-202ENSMUST00000165175 5524 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb3S4R1G7 Tfap2c-206ENSMUST00000170744 2776 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb3S4R1G7 Mpp4-210ENSMUST00000191200 2215 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb3S4R1G7 Nob1-201ENSMUST00000003946 1658 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb3S4R1G7 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb3S4R1G7 Usp19-204ENSMUST00000178075 4512 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb3S4R1G7 Usp19-202ENSMUST00000085044 4520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb3S4R1G7 AC154262.2-201ENSMUST00000224310 2293 ntBASIC12.26□□□□□ -0.45
H2afb3S4R1G7 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC12.26□□□□□ -0.45
H2afb3S4R1G7 Nrros-208ENSMUST00000143682 3577 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb3S4R1G7 Ablim2-201ENSMUST00000054598 3564 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb3S4R1G7 Mir698-201ENSMUST00000102164 109 ntBASIC12.26□□□□□ -0.45
H2afb3S4R1G7 Ngb-202ENSMUST00000110176 908 ntTSL 3 BASIC12.26□□□□□ -0.45
H2afb3S4R1G7 Gm20650-201ENSMUST00000175690 198 ntTSL 3 BASIC12.26□□□□□ -0.45
H2afb3S4R1G7 Dap-204ENSMUST00000186425 597 ntTSL 3 BASIC12.26□□□□□ -0.45
H2afb3S4R1G7 Gm45208-202ENSMUST00000208156 1153 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
H2afb3S4R1G7 Cyba-202ENSMUST00000212600 638 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb3S4R1G7 AC140397.2-201ENSMUST00000224213 834 ntBASIC12.26□□□□□ -0.45
H2afb3S4R1G7 Smdt1-201ENSMUST00000023086 705 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb3S4R1G7 1700019N19Rik-201ENSMUST00000028299 970 ntAPPRIS P2 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb3S4R1G7 Selenow-201ENSMUST00000044355 736 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb3S4R1G7 Klk5-201ENSMUST00000048444 1239 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb3S4R1G7 Plekhb1-207ENSMUST00000116287 1911 ntAPPRIS ALT1 TSL 3 BASIC12.26□□□□□ -0.45
H2afb3S4R1G7 Stk38-202ENSMUST00000119274 1939 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb3S4R1G7 Asap1-218ENSMUST00000177374 4582 ntAPPRIS P3 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb3S4R1G7 Map4k2-201ENSMUST00000025897 4644 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb3S4R1G7 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC12.26□□□□□ -0.45
H2afb3S4R1G7 Gm13848-201ENSMUST00000130777 2047 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb3S4R1G7 Qsox1-202ENSMUST00000111764 2722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb3S4R1G7 Kyat1-204ENSMUST00000113661 2057 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb3S4R1G7 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb3S4R1G7 Mecom-206ENSMUST00000172694 4381 ntTSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb3S4R1G7 Wasl-201ENSMUST00000031695 4352 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb3S4R1G7 Rp2-201ENSMUST00000033372 4417 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb3S4R1G7 Mthfsd-202ENSMUST00000116415 1520 ntAPPRIS ALT2 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb3S4R1G7 Gm14371-201ENSMUST00000138925 1518 ntBASIC12.26□□□□□ -0.45
H2afb3S4R1G7 Dpp8-201ENSMUST00000034960 4808 ntAPPRIS P1 TSL 1 (best) BASIC12.26□□□□□ -0.45
H2afb3S4R1G7 AC159196.2-201ENSMUST00000224082 1622 ntBASIC12.26□□□□□ -0.45
H2afb3S4R1G7 Gm35339-201ENSMUST00000208833 5090 ntAPPRIS P1 TSL 5 BASIC12.26□□□□□ -0.45
H2afb3S4R1G7 Zbtb49-202ENSMUST00000114113 2645 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
H2afb3S4R1G7 Gm38346-201ENSMUST00000192379 2639 ntBASIC12.25□□□□□ -0.45
H2afb3S4R1G7 Pak4-201ENSMUST00000032823 2611 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afb3S4R1G7 Mettl11b-201ENSMUST00000159679 1790 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afb3S4R1G7 Nol9-201ENSMUST00000084116 3722 ntAPPRIS ALT2 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afb3S4R1G7 Tyw1-203ENSMUST00000100662 1867 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
H2afb3S4R1G7 Dnajc5-201ENSMUST00000072334 6578 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afb3S4R1G7 Il11ra1-203ENSMUST00000108041 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afb3S4R1G7 Pisd-202ENSMUST00000071829 1986 ntTSL 5 BASIC12.25□□□□□ -0.45
H2afb3S4R1G7 Gm13305-201ENSMUST00000098121 1953 ntAPPRIS P1 TSL 1 (best) BASIC12.25□□□□□ -0.45
H2afb3S4R1G7 9130019P16Rik-201ENSMUST00000135612 1019 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
H2afb3S4R1G7 Mroh1-217ENSMUST00000162319 1244 ntAPPRIS ALT2 TSL 5 BASIC12.25□□□□□ -0.45
H2afb3S4R1G7 Erdr1-204ENSMUST00000179483 688 ntTSL 1 (best) BASIC12.25□□□□□ -0.45
H2afb3S4R1G7 Gm29456-201ENSMUST00000189894 768 ntTSL 3 BASIC12.25□□□□□ -0.45
Retrieved 100 of 76,532 protein–RNA pairs in 30 ms