Protein–RNA interactions for Protein: Q9R1C7

Prpf40a, Pre-mRNA-processing factor 40 homolog A, mousemouse

Known RBP Predictions only

Length 953 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Prpf40aQ9R1C7 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf40aQ9R1C7 Diablo-202ENSMUST00000111586 719 ntTSL 5 BASIC14.99□□□□□ -0.01
Prpf40aQ9R1C7 Gm6754-201ENSMUST00000117124 913 ntBASIC14.99□□□□□ -0.01
Prpf40aQ9R1C7 1700045H11Rik-201ENSMUST00000128056 593 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf40aQ9R1C7 Gm15294-202ENSMUST00000182079 366 ntAPPRIS P1 BASIC14.99□□□□□ -0.01
Prpf40aQ9R1C7 Gm2445-201ENSMUST00000182798 989 ntBASIC14.99□□□□□ -0.01
Prpf40aQ9R1C7 Diablo-201ENSMUST00000031385 681 ntTSL 2 BASIC14.99□□□□□ -0.01
Prpf40aQ9R1C7 Rbmx2-201ENSMUST00000033433 1747 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf40aQ9R1C7 Ncor2-205ENSMUST00000111398 8808 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Prpf40aQ9R1C7 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf40aQ9R1C7 Zfp977-201ENSMUST00000173283 1425 ntAPPRIS P1 TSL 2 BASIC14.99□□□□□ -0.01
Prpf40aQ9R1C7 Camk2b-203ENSMUST00000066431 1603 ntAPPRIS ALT1 TSL 5 BASIC14.99□□□□□ -0.01
Prpf40aQ9R1C7 Rai1-202ENSMUST00000090806 7217 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf40aQ9R1C7 Gata2-202ENSMUST00000170089 3135 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf40aQ9R1C7 Fxyd3-205ENSMUST00000167369 2894 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Prpf40aQ9R1C7 Gm15557-201ENSMUST00000109629 1380 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Prpf40aQ9R1C7 Samd4-203ENSMUST00000125113 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prpf40aQ9R1C7 Slc35c2-202ENSMUST00000109298 1991 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prpf40aQ9R1C7 Hspa12b-201ENSMUST00000099349 3413 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prpf40aQ9R1C7 Sbno2-209ENSMUST00000219260 4850 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Prpf40aQ9R1C7 Syt7-204ENSMUST00000223586 1344 ntBASIC14.98□□□□□ -0.01
Prpf40aQ9R1C7 Psd2-206ENSMUST00000177432 4367 ntAPPRIS ALT2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prpf40aQ9R1C7 Dda1-206ENSMUST00000138892 1738 ntTSL 3 BASIC14.98□□□□□ -0.01
Prpf40aQ9R1C7 Cyp11a1-201ENSMUST00000034874 2120 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prpf40aQ9R1C7 Gm6198-201ENSMUST00000191337 2929 ntBASIC14.98□□□□□ -0.01
Prpf40aQ9R1C7 Map2k7-206ENSMUST00000110998 3497 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prpf40aQ9R1C7 Tcf3-205ENSMUST00000105341 2451 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Prpf40aQ9R1C7 Mocs2-208ENSMUST00000166176 1855 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prpf40aQ9R1C7 R3hcc1-206ENSMUST00000216152 1467 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prpf40aQ9R1C7 Ppp1r14d-202ENSMUST00000110820 790 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Prpf40aQ9R1C7 Gm6912-201ENSMUST00000117218 544 ntBASIC14.98□□□□□ -0.01
Prpf40aQ9R1C7 Arhgap27os1-201ENSMUST00000130556 923 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Prpf40aQ9R1C7 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC14.98□□□□□ -0.01
Prpf40aQ9R1C7 Tex30-211ENSMUST00000150911 960 ntAPPRIS P1 TSL 2 BASIC14.98□□□□□ -0.01
Prpf40aQ9R1C7 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC14.98□□□□□ -0.01
Prpf40aQ9R1C7 1700029H14Rik-204ENSMUST00000151400 1216 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Prpf40aQ9R1C7 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC14.98□□□□□ -0.01
Prpf40aQ9R1C7 Gnb2-215ENSMUST00000170293 993 ntTSL 5 BASIC14.98□□□□□ -0.01
Prpf40aQ9R1C7 2900092O11Rik-201ENSMUST00000191770 755 ntBASIC14.98□□□□□ -0.01
Prpf40aQ9R1C7 AC154846.1-201ENSMUST00000226278 862 ntBASIC14.98□□□□□ -0.01
Prpf40aQ9R1C7 Gm8225-201ENSMUST00000090257 879 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prpf40aQ9R1C7 Stox2-201ENSMUST00000079195 10467 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prpf40aQ9R1C7 Asb3-206ENSMUST00000203878 1813 ntAPPRIS ALT2 TSL 5 BASIC14.98□□□□□ -0.01
Prpf40aQ9R1C7 Pbrm1-203ENSMUST00000052239 5065 ntAPPRIS ALT1 TSL 5 BASIC14.98□□□□□ -0.01
Prpf40aQ9R1C7 Aste1-201ENSMUST00000035181 2755 ntAPPRIS P3 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prpf40aQ9R1C7 Mmp11-202ENSMUST00000120281 1793 ntAPPRIS P1 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prpf40aQ9R1C7 Pdlim2-210ENSMUST00000153735 1578 ntAPPRIS P1 TSL 5 BASIC14.98□□□□□ -0.01
Prpf40aQ9R1C7 Amotl2-201ENSMUST00000035121 4328 ntAPPRIS P2 TSL 1 (best) BASIC14.98□□□□□ -0.01
Prpf40aQ9R1C7 Hnrnpa1-201ENSMUST00000036004 1918 ntTSL 1 (best) BASIC14.98□□□□□ -0.01
Prpf40aQ9R1C7 Gm36995-201ENSMUST00000126170 5727 ntTSL 2 BASIC14.97□□□□□ -0.01
Prpf40aQ9R1C7 Rtn3-203ENSMUST00000088169 1709 ntTSL 5 BASIC14.97□□□□□ -0.01
Prpf40aQ9R1C7 Gucy2e-201ENSMUST00000021259 8331 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Prpf40aQ9R1C7 Ace3-201ENSMUST00000190995 2214 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf40aQ9R1C7 1600014C10Rik-205ENSMUST00000178876 3283 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf40aQ9R1C7 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf40aQ9R1C7 1700113H08Rik-201ENSMUST00000169849 1332 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Prpf40aQ9R1C7 Ell-201ENSMUST00000093454 3072 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf40aQ9R1C7 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf40aQ9R1C7 5730409E04Rik-201ENSMUST00000097886 2886 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf40aQ9R1C7 Fam20a-201ENSMUST00000020938 2541 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf40aQ9R1C7 Necab1-201ENSMUST00000041606 4922 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf40aQ9R1C7 Nfatc2-204ENSMUST00000109184 6828 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf40aQ9R1C7 Mir698-201ENSMUST00000102164 109 ntBASIC14.97□□□□□ -0.01
Prpf40aQ9R1C7 Gm9522-201ENSMUST00000182394 926 ntBASIC14.97□□□□□ -0.01
Prpf40aQ9R1C7 Gm29667-201ENSMUST00000190817 490 ntBASIC14.97□□□□□ -0.01
Prpf40aQ9R1C7 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf40aQ9R1C7 Erp27-201ENSMUST00000032343 1029 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf40aQ9R1C7 Gm11149-201ENSMUST00000068730 1250 ntTSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf40aQ9R1C7 Syncrip-209ENSMUST00000174361 1767 ntTSL 5 BASIC14.97□□□□□ -0.01
Prpf40aQ9R1C7 Ints7-201ENSMUST00000045450 5347 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf40aQ9R1C7 Fam83e-201ENSMUST00000129507 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf40aQ9R1C7 Gm14752-201ENSMUST00000120719 2075 ntBASIC14.97□□□□□ -0.01
Prpf40aQ9R1C7 Arhgef1-203ENSMUST00000117419 3214 ntAPPRIS ALT2 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf40aQ9R1C7 Pik3cd-205ENSMUST00000118704 4894 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf40aQ9R1C7 Shmt2-206ENSMUST00000219239 2238 ntAPPRIS ALT1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf40aQ9R1C7 Rxrg-204ENSMUST00000111386 1705 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Prpf40aQ9R1C7 Ppt2-209ENSMUST00000171121 1710 ntAPPRIS P1 TSL 5 BASIC14.97□□□□□ -0.01
Prpf40aQ9R1C7 Elmo3-202ENSMUST00000212033 2351 ntTSL 5 BASIC14.97□□□□□ -0.01
Prpf40aQ9R1C7 Armc8-201ENSMUST00000035043 4647 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf40aQ9R1C7 Slc38a7-204ENSMUST00000212270 3315 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf40aQ9R1C7 Prrc2a-201ENSMUST00000025253 6888 ntAPPRIS P1 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf40aQ9R1C7 Nfasc-207ENSMUST00000187861 4927 ntTSL 5 BASIC14.97□□□□□ -0.01
Prpf40aQ9R1C7 G2e3-201ENSMUST00000054308 6803 ntAPPRIS P3 TSL 1 (best) BASIC14.97□□□□□ -0.01
Prpf40aQ9R1C7 Alkbh3os1-201ENSMUST00000028621 1549 ntTSL 5 BASIC14.97□□□□□ -0.01
Prpf40aQ9R1C7 BC006965-201ENSMUST00000124028 1952 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Prpf40aQ9R1C7 Hspa4-201ENSMUST00000020630 4618 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prpf40aQ9R1C7 Mllt6-202ENSMUST00000107586 7206 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Prpf40aQ9R1C7 Kansl2-ps-201ENSMUST00000181818 1461 ntBASIC14.96□□□□□ -0.01
Prpf40aQ9R1C7 Rgs12-202ENSMUST00000087684 4713 ntAPPRIS ALT2 TSL 5 BASIC14.96□□□□□ -0.01
Prpf40aQ9R1C7 Eno1b-201ENSMUST00000076155 1757 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prpf40aQ9R1C7 Sin3a-208ENSMUST00000168678 5206 ntAPPRIS P3 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prpf40aQ9R1C7 Prkce-202ENSMUST00000097275 6254 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Prpf40aQ9R1C7 Gm13385-201ENSMUST00000121089 220 ntBASIC14.96□□□□□ -0.01
Prpf40aQ9R1C7 4930417O22Rik-201ENSMUST00000123249 1184 ntTSL 2 BASIC14.96□□□□□ -0.01
Prpf40aQ9R1C7 Gm12352-201ENSMUST00000154452 760 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Prpf40aQ9R1C7 Gm24420-201ENSMUST00000176676 59 ntBASIC14.96□□□□□ -0.01
Prpf40aQ9R1C7 4833428L15Rik-201ENSMUST00000181230 1259 ntTSL 1 (best) BASIC14.96□□□□□ -0.01
Prpf40aQ9R1C7 AI467606-202ENSMUST00000206102 832 ntAPPRIS P1 TSL 5 BASIC14.96□□□□□ -0.01
Prpf40aQ9R1C7 AC165157.4-201ENSMUST00000220587 139 ntBASIC14.96□□□□□ -0.01
Prpf40aQ9R1C7 Glud1-201ENSMUST00000022322 3390 ntAPPRIS P1 TSL 1 (best) BASIC14.96□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 50.4 ms