Protein–RNA interactions for Protein: Q9ES00

Ube4b, Ubiquitin conjugation factor E4 B, mousemouse

Predictions only

Length 1,173 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ube4bQ9ES00 Aifm2-202ENSMUST00000080099 1329 ntTSL 1 (best) BASIC13.07□□□□□ -0.32
Ube4bQ9ES00 Cnn1-201ENSMUST00000001384 2381 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ube4bQ9ES00 AC126549.2-201ENSMUST00000223997 1976 ntBASIC13.07□□□□□ -0.32
Ube4bQ9ES00 Tspan1-201ENSMUST00000030465 1985 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ube4bQ9ES00 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ube4bQ9ES00 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ube4bQ9ES00 Rab3a-201ENSMUST00000034301 1363 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ube4bQ9ES00 Ndc80-201ENSMUST00000024851 2201 ntAPPRIS P1 TSL 1 (best) BASIC13.07□□□□□ -0.32
Ube4bQ9ES00 Pcid2-201ENSMUST00000164416 2860 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ube4bQ9ES00 Fam13c-202ENSMUST00000105436 3380 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Ube4bQ9ES00 Unc5d-204ENSMUST00000210785 3404 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ube4bQ9ES00 Cacna2d1-203ENSMUST00000101581 3879 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ube4bQ9ES00 Cacna2d1-206ENSMUST00000180204 3882 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ube4bQ9ES00 Cacna2d1-209ENSMUST00000199704 3861 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ube4bQ9ES00 Otx1-201ENSMUST00000006071 2789 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ube4bQ9ES00 Ifnar2-201ENSMUST00000023693 3047 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ube4bQ9ES00 Abhd14b-201ENSMUST00000048527 1745 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ube4bQ9ES00 Rara-207ENSMUST00000164748 3129 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ube4bQ9ES00 Park7-204ENSMUST00000105675 882 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Ube4bQ9ES00 Mcub-204ENSMUST00000153506 1005 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ube4bQ9ES00 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ube4bQ9ES00 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Ube4bQ9ES00 Gm27628-201ENSMUST00000184911 107 ntBASIC13.06□□□□□ -0.32
Ube4bQ9ES00 6030408B16Rik-201ENSMUST00000071328 1155 ntAPPRIS ALT2 TSL 5 BASIC13.06□□□□□ -0.32
Ube4bQ9ES00 Dnajc13-201ENSMUST00000035170 8012 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Ube4bQ9ES00 Accsl-201ENSMUST00000099690 2224 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ube4bQ9ES00 Mapk4-201ENSMUST00000091851 4594 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ube4bQ9ES00 Gfod2-201ENSMUST00000013294 4352 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ube4bQ9ES00 Smtnl1-201ENSMUST00000028471 1761 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ube4bQ9ES00 Kmt2e-201ENSMUST00000094962 7252 ntAPPRIS P1 TSL 5 BASIC13.06□□□□□ -0.32
Ube4bQ9ES00 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ube4bQ9ES00 Ntng2-204ENSMUST00000102873 1593 ntAPPRIS ALT2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ube4bQ9ES00 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ube4bQ9ES00 Sfxn3-203ENSMUST00000111954 2867 ntTSL 5 BASIC13.06□□□□□ -0.32
Ube4bQ9ES00 Cad-201ENSMUST00000013773 7137 ntAPPRIS P1 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ube4bQ9ES00 Il12rb1-201ENSMUST00000000808 2873 ntAPPRIS P2 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ube4bQ9ES00 Gfra1-203ENSMUST00000129100 4415 ntTSL 1 (best) BASIC13.06□□□□□ -0.32
Ube4bQ9ES00 Lpar1-205ENSMUST00000107575 3421 ntAPPRIS P3 TSL 1 (best) BASIC13.06□□□□□ -0.32
Ube4bQ9ES00 Gm42706-201ENSMUST00000199733 1910 ntBASIC13.05□□□□□ -0.32
Ube4bQ9ES00 Rpsa-201ENSMUST00000035105 1938 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ube4bQ9ES00 AC154527.4-201ENSMUST00000224364 1667 ntBASIC13.05□□□□□ -0.32
Ube4bQ9ES00 Tnks1bp1-201ENSMUST00000048400 4799 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ube4bQ9ES00 Snap23-203ENSMUST00000116437 2730 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ube4bQ9ES00 Ylpm1-202ENSMUST00000101202 4605 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Ube4bQ9ES00 Wnt9a-202ENSMUST00000108783 3318 ntAPPRIS P2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ube4bQ9ES00 Parp3-202ENSMUST00000112479 2030 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ube4bQ9ES00 Urgcp-203ENSMUST00000118076 4208 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ube4bQ9ES00 Tcf21-202ENSMUST00000218002 1788 ntBASIC13.05□□□□□ -0.32
Ube4bQ9ES00 AC025913.2-201ENSMUST00000220136 1766 ntBASIC13.05□□□□□ -0.32
Ube4bQ9ES00 Slc25a14-201ENSMUST00000033431 1760 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ube4bQ9ES00 Gpat3-201ENSMUST00000031255 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ube4bQ9ES00 Zfp24-203ENSMUST00000153337 1513 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ube4bQ9ES00 Gm5763-201ENSMUST00000155951 1530 ntBASIC13.05□□□□□ -0.32
Ube4bQ9ES00 Cyp27b1-201ENSMUST00000165764 2380 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ube4bQ9ES00 Gm15593-201ENSMUST00000122085 1008 ntBASIC13.05□□□□□ -0.32
Ube4bQ9ES00 1810062O18Rik-203ENSMUST00000129237 647 ntTSL 5 BASIC13.05□□□□□ -0.32
Ube4bQ9ES00 Trappc9-204ENSMUST00000170633 4688 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ube4bQ9ES00 Calcb-203ENSMUST00000182816 706 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Ube4bQ9ES00 Rps2-ps5-201ENSMUST00000184266 849 ntBASIC13.05□□□□□ -0.32
Ube4bQ9ES00 2810030D12Rik-203ENSMUST00000190461 1039 ntBASIC13.05□□□□□ -0.32
Ube4bQ9ES00 Gm2651-201ENSMUST00000203560 838 ntBASIC13.05□□□□□ -0.32
Ube4bQ9ES00 Mccc2-201ENSMUST00000022148 2123 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ube4bQ9ES00 Yif1b-201ENSMUST00000032809 1111 ntAPPRIS P3 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ube4bQ9ES00 Olfr30-201ENSMUST00000055204 1066 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Ube4bQ9ES00 Lce3c-201ENSMUST00000055375 567 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ube4bQ9ES00 Trpv4-202ENSMUST00000112217 2436 ntTSL 5 BASIC13.05□□□□□ -0.32
Ube4bQ9ES00 Slc7a11-205ENSMUST00000194462 2419 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ube4bQ9ES00 Fgfr3-209ENSMUST00000164207 4150 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ube4bQ9ES00 Gm5096-201ENSMUST00000091776 1858 ntAPPRIS P1 BASIC13.05□□□□□ -0.32
Ube4bQ9ES00 Setd1a-202ENSMUST00000047157 5927 ntAPPRIS P1 TSL 5 BASIC13.05□□□□□ -0.32
Ube4bQ9ES00 B3gat2-201ENSMUST00000063663 5655 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ube4bQ9ES00 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC13.05□□□□□ -0.32
Ube4bQ9ES00 Suox-201ENSMUST00000054764 2497 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ube4bQ9ES00 Mpv17l-201ENSMUST00000023360 3087 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ube4bQ9ES00 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ube4bQ9ES00 Jmjd8-205ENSMUST00000133595 2265 ntAPPRIS ALT2 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ube4bQ9ES00 Fbxl12-207ENSMUST00000151861 1668 ntTSL 2 BASIC13.05□□□□□ -0.32
Ube4bQ9ES00 Slc12a4-201ENSMUST00000034370 3811 ntAPPRIS ALT1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ube4bQ9ES00 Ska1-202ENSMUST00000177604 2605 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ube4bQ9ES00 Kif28-202ENSMUST00000211943 2643 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Ube4bQ9ES00 Sec14l5-201ENSMUST00000165810 2337 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ube4bQ9ES00 Hadhb-202ENSMUST00000114783 2045 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ube4bQ9ES00 Atxn7l1os2-201ENSMUST00000138617 2019 ntTSL 1 (best) BASIC13.05□□□□□ -0.32
Ube4bQ9ES00 Scd2-201ENSMUST00000026221 5453 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ube4bQ9ES00 Ebna1bp2-201ENSMUST00000030501 2960 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ube4bQ9ES00 Ky-201ENSMUST00000039390 5837 ntAPPRIS P1 TSL 1 (best) BASIC13.05□□□□□ -0.32
Ube4bQ9ES00 Gm8909-203ENSMUST00000173353 1428 ntAPPRIS ALT2 TSL 5 BASIC13.05□□□□□ -0.32
Ube4bQ9ES00 Bcat2-203ENSMUST00000209204 2081 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ube4bQ9ES00 Fgd5-201ENSMUST00000089334 6095 ntAPPRIS P2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ube4bQ9ES00 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC13.04□□□□□ -0.32
Ube4bQ9ES00 Grid2ip-203ENSMUST00000120825 3865 ntTSL 5 BASIC13.04□□□□□ -0.32
Ube4bQ9ES00 Setdb1-203ENSMUST00000107171 4573 ntAPPRIS ALT2 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ube4bQ9ES00 Mterf4-202ENSMUST00000112942 1525 ntTSL 2 BASIC13.04□□□□□ -0.32
Ube4bQ9ES00 B230217C12Rik-203ENSMUST00000164364 1859 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ube4bQ9ES00 Myo10-201ENSMUST00000022882 5880 ntTSL 1 (best) BASIC13.04□□□□□ -0.32
Ube4bQ9ES00 Tsku-207ENSMUST00000206414 2310 ntAPPRIS P1 TSL 1 (best) BASIC13.04□□□□□ -0.32
Ube4bQ9ES00 Gm10327-201ENSMUST00000105222 1002 ntBASIC13.04□□□□□ -0.32
Ube4bQ9ES00 Rpl13-ps5-201ENSMUST00000117813 630 ntBASIC13.04□□□□□ -0.32
Ube4bQ9ES00 Gemin7-204ENSMUST00000122055 609 ntAPPRIS P1 TSL 3 BASIC13.04□□□□□ -0.32
Ube4bQ9ES00 Gm13496-201ENSMUST00000141133 1165 ntTSL 2 BASIC13.04□□□□□ -0.32
Retrieved 100 of 76,532 protein–RNA pairs in 46.2 ms