Protein–RNA interactions for Protein: Q9ERG0

Lima1, LIM domain and actin-binding protein 1, mousemouse

Known RBP Predictions only

Length 753 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Lima1Q9ERG0 Twistnb-201ENSMUST00000020877 4325 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Gm22065-201ENSMUST00000103753 110 ntBASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Gm22066-201ENSMUST00000103761 110 ntBASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Gm24932-201ENSMUST00000103763 110 ntBASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Gm24115-201ENSMUST00000103799 110 ntBASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Gm22190-201ENSMUST00000103827 110 ntBASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Gm22191-201ENSMUST00000103831 110 ntBASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Gm24721-201ENSMUST00000103849 110 ntBASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Gm28018-201ENSMUST00000103869 110 ntBASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Gm26399-201ENSMUST00000103937 110 ntBASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Igf2-203ENSMUST00000105935 650 ntAPPRIS P1 TSL 3 BASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Romo1-203ENSMUST00000109598 362 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Bola3-202ENSMUST00000120040 583 ntTSL 3 BASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Tma7-201ENSMUST00000167504 944 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Rhox2a-202ENSMUST00000173650 735 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Gm25349-201ENSMUST00000177728 110 ntBASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Gm23616-201ENSMUST00000177797 110 ntBASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Gm25871-201ENSMUST00000177816 110 ntBASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Gm24752-201ENSMUST00000178240 110 ntBASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Gm24496-201ENSMUST00000178287 110 ntBASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Gm25649-201ENSMUST00000178476 110 ntBASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Gm25548-201ENSMUST00000178681 110 ntBASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Gm23147-201ENSMUST00000178841 110 ntBASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Sirpa-214ENSMUST00000179001 3812 ntAPPRIS P3 TSL 5 BASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Gm26095-201ENSMUST00000179270 110 ntBASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Gm22171-201ENSMUST00000179283 110 ntBASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Gm23936-201ENSMUST00000179354 110 ntBASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Gm22619-201ENSMUST00000179516 110 ntBASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Gm25255-201ENSMUST00000179579 110 ntBASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Gm24755-201ENSMUST00000179691 110 ntBASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Gm26506-201ENSMUST00000179692 110 ntBASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Gm25086-201ENSMUST00000179931 110 ntBASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Gm23243-201ENSMUST00000180047 110 ntBASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Gm24659-201ENSMUST00000180212 110 ntBASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Gm24169-201ENSMUST00000180244 110 ntBASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Gm23689-201ENSMUST00000180354 110 ntBASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Gm27359-201ENSMUST00000184153 110 ntBASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Gm27785-201ENSMUST00000184268 110 ntBASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Gm27466-201ENSMUST00000184396 110 ntBASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Gm27702-201ENSMUST00000184512 56 ntBASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Rhox2c-204ENSMUST00000184688 720 ntTSL 5 BASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Gm27703-201ENSMUST00000184836 110 ntBASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Gm37935-201ENSMUST00000192012 982 ntBASIC13.46□□□□□ -0.25
Lima1Q9ERG0 6030443J06Rik-204ENSMUST00000195898 786 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Gm43073-201ENSMUST00000198200 1189 ntBASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Ppcdc-205ENSMUST00000214144 724 ntTSL 1 (best) BASIC13.46□□□□□ -0.25
Lima1Q9ERG0 CT030704.2-201ENSMUST00000228887 494 ntBASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Tnp2-201ENSMUST00000051297 549 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Gm6594-201ENSMUST00000097278 288 ntAPPRIS P1 BASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Ncor2-206ENSMUST00000111402 8862 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Polr3g-201ENSMUST00000048993 3054 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.25
Lima1Q9ERG0 Nynrin-202ENSMUST00000168479 7511 ntAPPRIS P1 TSL 5 BASIC13.46□□□□□ -0.26
Lima1Q9ERG0 Dcst1-201ENSMUST00000070820 2342 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Lima1Q9ERG0 Ppara-202ENSMUST00000109422 3413 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Lima1Q9ERG0 Kbtbd6-201ENSMUST00000100359 2982 ntAPPRIS ALT2 BASIC13.46□□□□□ -0.26
Lima1Q9ERG0 Mylk2-201ENSMUST00000028970 2951 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Lima1Q9ERG0 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Lima1Q9ERG0 Chfr-202ENSMUST00000112519 3159 ntAPPRIS ALT2 TSL 1 (best) BASIC13.46□□□□□ -0.26
Lima1Q9ERG0 Pigq-201ENSMUST00000026823 3173 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Lima1Q9ERG0 Golim4-208ENSMUST00000167078 2902 ntAPPRIS P3 TSL 1 (best) BASIC13.46□□□□□ -0.26
Lima1Q9ERG0 Gm27194-201ENSMUST00000175753 2936 ntBASIC13.46□□□□□ -0.26
Lima1Q9ERG0 Psmd1-201ENSMUST00000027432 3112 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Lima1Q9ERG0 Nepn-201ENSMUST00000067085 1844 ntAPPRIS P1 TSL 1 (best) BASIC13.46□□□□□ -0.26
Lima1Q9ERG0 B930092H01Rik-201ENSMUST00000213377 2678 ntTSL 1 (best) BASIC13.46□□□□□ -0.26
Lima1Q9ERG0 Phka1-203ENSMUST00000113611 6064 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Lima1Q9ERG0 Phka1-205ENSMUST00000120270 6064 ntAPPRIS ALT2 TSL 5 BASIC13.46□□□□□ -0.26
Lima1Q9ERG0 Spef1-202ENSMUST00000110218 2600 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lima1Q9ERG0 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lima1Q9ERG0 Etv6-202ENSMUST00000111963 5707 ntTSL 1 (best) BASIC13.45□□□□□ -0.26
Lima1Q9ERG0 Gm5939-201ENSMUST00000119613 2874 ntBASIC13.45□□□□□ -0.26
Lima1Q9ERG0 Net1-201ENSMUST00000091853 2680 ntAPPRIS P3 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lima1Q9ERG0 Cmc2-202ENSMUST00000128304 394 ntTSL 5 BASIC13.45□□□□□ -0.26
Lima1Q9ERG0 Haghl-211ENSMUST00000150324 1267 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lima1Q9ERG0 Six3os1-205ENSMUST00000175913 791 ntTSL 3 BASIC13.45□□□□□ -0.26
Lima1Q9ERG0 Gm9824-201ENSMUST00000178707 561 ntBASIC13.45□□□□□ -0.26
Lima1Q9ERG0 Aqp10-ps-201ENSMUST00000199555 611 ntBASIC13.45□□□□□ -0.26
Lima1Q9ERG0 Gm34397-203ENSMUST00000214991 630 ntTSL 5 BASIC13.45□□□□□ -0.26
Lima1Q9ERG0 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lima1Q9ERG0 Tmem186-201ENSMUST00000052505 2736 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lima1Q9ERG0 Phldb1-218ENSMUST00000156918 3485 ntTSL 5 BASIC13.45□□□□□ -0.26
Lima1Q9ERG0 Gsdme-201ENSMUST00000031845 2502 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lima1Q9ERG0 Ano6-201ENSMUST00000071874 4927 ntAPPRIS P2 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lima1Q9ERG0 Ube2l6-201ENSMUST00000102642 1560 ntAPPRIS P1 TSL 1 (best) BASIC13.45□□□□□ -0.26
Lima1Q9ERG0 Prrt3-205ENSMUST00000205170 1903 ntAPPRIS ALT2 TSL 2 BASIC13.45□□□□□ -0.26
Lima1Q9ERG0 Mff-201ENSMUST00000073025 1706 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Lima1Q9ERG0 Prkce-201ENSMUST00000097274 3161 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lima1Q9ERG0 Lrrc8e-201ENSMUST00000053035 3878 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lima1Q9ERG0 Matr3-206ENSMUST00000187389 3107 ntAPPRIS P1 TSL 5 BASIC13.44□□□□□ -0.26
Lima1Q9ERG0 Tspan9-202ENSMUST00000112171 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lima1Q9ERG0 Gm27196-201ENSMUST00000184787 2582 ntBASIC13.44□□□□□ -0.26
Lima1Q9ERG0 Rusc1-201ENSMUST00000052539 3316 ntAPPRIS ALT2 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lima1Q9ERG0 Gdap1l1-203ENSMUST00000109421 1206 ntAPPRIS ALT1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lima1Q9ERG0 Gm20479-201ENSMUST00000126587 556 ntAPPRIS P1 TSL 3 BASIC13.44□□□□□ -0.26
Lima1Q9ERG0 Rasd2-201ENSMUST00000132133 1299 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lima1Q9ERG0 Tmem262-201ENSMUST00000143303 545 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Lima1Q9ERG0 Gm13849-201ENSMUST00000153328 835 ntTSL 5 BASIC13.44□□□□□ -0.26
Lima1Q9ERG0 Gm6736-201ENSMUST00000166583 948 ntBASIC13.44□□□□□ -0.26
Lima1Q9ERG0 Smim4-204ENSMUST00000203261 1219 ntTSL 1 (best) BASIC13.44□□□□□ -0.26
Lima1Q9ERG0 Tbc1d1-201ENSMUST00000043893 6471 ntAPPRIS ALT2 TSL 2 BASIC13.44□□□□□ -0.26
Lima1Q9ERG0 Pphln1-203ENSMUST00000109256 3759 ntAPPRIS P1 TSL 1 (best) BASIC13.44□□□□□ -0.26
Retrieved 100 of 76,532 protein–RNA pairs in 80.9 ms