Protein–RNA interactions for Protein: Q9EPU4

Cpsf1, Cleavage and polyadenylation specificity factor subunit 1, mousemouse

Known RBP Predictions only

Length 1,441 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cpsf1Q9EPU4 Zfp583-201ENSMUST00000062765 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cpsf1Q9EPU4 Tbc1d8-201ENSMUST00000054462 4451 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cpsf1Q9EPU4 Pold3-201ENSMUST00000032969 3069 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cpsf1Q9EPU4 Ctbp2-209ENSMUST00000166439 1997 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cpsf1Q9EPU4 Fbxo21-201ENSMUST00000035579 3883 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cpsf1Q9EPU4 Tmem218-201ENSMUST00000034632 2619 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cpsf1Q9EPU4 Ctgf-203ENSMUST00000176228 2490 ntTSL 2 BASIC18.55■□□□□ 0.56
Cpsf1Q9EPU4 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cpsf1Q9EPU4 Mboat2-201ENSMUST00000078902 2467 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Cpsf1Q9EPU4 Apol6-201ENSMUST00000127957 2034 ntAPPRIS P4 TSL 2 BASIC18.55■□□□□ 0.56
Cpsf1Q9EPU4 Srcin1-203ENSMUST00000107596 7054 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cpsf1Q9EPU4 Gm43399-201ENSMUST00000202546 2374 ntBASIC18.55■□□□□ 0.56
Cpsf1Q9EPU4 Whrn-207ENSMUST00000107393 4028 ntAPPRIS ALT2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cpsf1Q9EPU4 Calcr-203ENSMUST00000168592 2064 ntAPPRIS ALT2 TSL 5 BASIC18.55■□□□□ 0.56
Cpsf1Q9EPU4 Bin2-205ENSMUST00000182814 1901 ntTSL 5 BASIC18.55■□□□□ 0.56
Cpsf1Q9EPU4 Fam71f1-203ENSMUST00000164560 1411 ntAPPRIS P4 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cpsf1Q9EPU4 Snord83b-201ENSMUST00000104546 94 ntBASIC18.55■□□□□ 0.56
Cpsf1Q9EPU4 Lamtor2-202ENSMUST00000119002 568 ntTSL 2 BASIC18.55■□□□□ 0.56
Cpsf1Q9EPU4 Gm16251-201ENSMUST00000162649 338 ntTSL 3 BASIC18.55■□□□□ 0.56
Cpsf1Q9EPU4 Lsmem2-201ENSMUST00000191791 369 ntTSL 3 BASIC18.55■□□□□ 0.56
Cpsf1Q9EPU4 Gm43179-201ENSMUST00000198797 275 ntBASIC18.55■□□□□ 0.56
Cpsf1Q9EPU4 Gm42839-201ENSMUST00000198978 525 ntTSL 2 BASIC18.55■□□□□ 0.56
Cpsf1Q9EPU4 Gm44985-201ENSMUST00000206202 1016 ntBASIC18.55■□□□□ 0.56
Cpsf1Q9EPU4 2810047C21Rik1-202ENSMUST00000210322 1179 ntTSL 1 (best) BASIC18.55■□□□□ 0.56
Cpsf1Q9EPU4 AC134254.1-201ENSMUST00000221362 167 ntBASIC18.55■□□□□ 0.56
Cpsf1Q9EPU4 Gm34466-201ENSMUST00000222218 505 ntTSL 2 BASIC18.55■□□□□ 0.56
Cpsf1Q9EPU4 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cpsf1Q9EPU4 Sufu-203ENSMUST00000118440 2663 ntTSL 5 BASIC18.55■□□□□ 0.56
Cpsf1Q9EPU4 Acvr2a-201ENSMUST00000063886 5686 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cpsf1Q9EPU4 Gm11661-201ENSMUST00000121761 1327 ntBASIC18.55■□□□□ 0.56
Cpsf1Q9EPU4 Pwwp2a-201ENSMUST00000061070 3277 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
Cpsf1Q9EPU4 Usp38-201ENSMUST00000042724 4707 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cpsf1Q9EPU4 Kdm2a-202ENSMUST00000075856 7242 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cpsf1Q9EPU4 AC154262.2-201ENSMUST00000224310 2293 ntBASIC18.54■□□□□ 0.56
Cpsf1Q9EPU4 Gps1-201ENSMUST00000100134 1925 ntTSL 2 BASIC18.54■□□□□ 0.56
Cpsf1Q9EPU4 Rnf103-203ENSMUST00000114179 2671 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cpsf1Q9EPU4 Rfx7-205ENSMUST00000184015 1554 ntTSL 5 BASIC18.54■□□□□ 0.56
Cpsf1Q9EPU4 Sdccag8-202ENSMUST00000056773 1551 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cpsf1Q9EPU4 Ranbp3-201ENSMUST00000002445 2511 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cpsf1Q9EPU4 Plcd1-203ENSMUST00000214470 2706 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cpsf1Q9EPU4 Fam118b-203ENSMUST00000121564 1962 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cpsf1Q9EPU4 Zfp169-203ENSMUST00000176176 2162 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cpsf1Q9EPU4 Adsl-206ENSMUST00000168756 1439 ntTSL 5 BASIC18.54■□□□□ 0.56
Cpsf1Q9EPU4 Dlgap4-201ENSMUST00000000094 1411 ntTSL 5 BASIC18.54■□□□□ 0.56
Cpsf1Q9EPU4 Ypel3-202ENSMUST00000106356 785 ntAPPRIS P1 TSL 5 BASIC18.54■□□□□ 0.56
Cpsf1Q9EPU4 Borcs5-202ENSMUST00000166591 792 ntTSL 2 BASIC18.54■□□□□ 0.56
Cpsf1Q9EPU4 Gm27572-201ENSMUST00000183702 255 ntBASIC18.54■□□□□ 0.56
Cpsf1Q9EPU4 Gm19710-201ENSMUST00000200257 640 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cpsf1Q9EPU4 Gm36634-201ENSMUST00000218356 1259 ntTSL 3 BASIC18.54■□□□□ 0.56
Cpsf1Q9EPU4 St13-201ENSMUST00000023039 1089 ntTSL 5 BASIC18.54■□□□□ 0.56
Cpsf1Q9EPU4 Fgf2-201ENSMUST00000038885 462 ntAPPRIS ALT2 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cpsf1Q9EPU4 Igsf8-204ENSMUST00000139528 2866 ntTSL 2 BASIC18.54■□□□□ 0.56
Cpsf1Q9EPU4 Add1-203ENSMUST00000114335 4547 ntTSL 5 BASIC18.54■□□□□ 0.56
Cpsf1Q9EPU4 Iws1-206ENSMUST00000212675 2936 ntAPPRIS ALT2 TSL 5 BASIC18.54■□□□□ 0.56
Cpsf1Q9EPU4 Ppp1cb-201ENSMUST00000015100 5962 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
Cpsf1Q9EPU4 Tada3-202ENSMUST00000043333 1708 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cpsf1Q9EPU4 Runx2-213ENSMUST00000162878 2987 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
Cpsf1Q9EPU4 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC18.54■□□□□ 0.56
Cpsf1Q9EPU4 Gm18244-201ENSMUST00000219747 1566 ntBASIC18.54■□□□□ 0.56
Cpsf1Q9EPU4 Gm19863-201ENSMUST00000192480 2218 ntBASIC18.53■□□□□ 0.56
Cpsf1Q9EPU4 Usp27x-203ENSMUST00000191497 4273 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
Cpsf1Q9EPU4 Bcl2l1-202ENSMUST00000109820 2568 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cpsf1Q9EPU4 Gm4297-201ENSMUST00000119285 2579 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
Cpsf1Q9EPU4 Prok2-203ENSMUST00000101120 1450 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cpsf1Q9EPU4 Gm9918-201ENSMUST00000181801 2192 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cpsf1Q9EPU4 Ighv7-3-201ENSMUST00000103461 361 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Cpsf1Q9EPU4 Gm15635-202ENSMUST00000131160 917 ntTSL 3 BASIC18.53■□□□□ 0.56
Cpsf1Q9EPU4 Pla2g10os-201ENSMUST00000141172 174 ntTSL 5 BASIC18.53■□□□□ 0.56
Cpsf1Q9EPU4 Spdye4b-202ENSMUST00000159781 1128 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cpsf1Q9EPU4 Rims3-204ENSMUST00000171363 977 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cpsf1Q9EPU4 Gm9823-201ENSMUST00000051212 327 ntBASIC18.53■□□□□ 0.56
Cpsf1Q9EPU4 A430005L14Rik-201ENSMUST00000058393 1098 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cpsf1Q9EPU4 Utp23-201ENSMUST00000059599 740 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cpsf1Q9EPU4 Gm11562-201ENSMUST00000073853 817 ntAPPRIS P1 BASIC18.53■□□□□ 0.56
Cpsf1Q9EPU4 Ate1-204ENSMUST00000178534 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cpsf1Q9EPU4 Mtcl1-201ENSMUST00000086693 7221 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cpsf1Q9EPU4 Cacna2d3-201ENSMUST00000022567 3695 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cpsf1Q9EPU4 Arhgap44-203ENSMUST00000093002 3982 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Cpsf1Q9EPU4 2310026I22Rik-201ENSMUST00000180941 1300 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cpsf1Q9EPU4 Tpcn1-201ENSMUST00000046426 4712 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cpsf1Q9EPU4 Bag6-202ENSMUST00000166426 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cpsf1Q9EPU4 A930007I19Rik-203ENSMUST00000181726 2099 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
Cpsf1Q9EPU4 Tmc8-201ENSMUST00000050874 2577 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cpsf1Q9EPU4 Psmd13-208ENSMUST00000163610 1382 ntTSL 5 BASIC18.53■□□□□ 0.56
Cpsf1Q9EPU4 Arhgef40-216ENSMUST00000182760 5130 ntAPPRIS ALT2 TSL 5 BASIC18.53■□□□□ 0.56
Cpsf1Q9EPU4 0610009O20Rik-201ENSMUST00000025314 2404 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cpsf1Q9EPU4 Slc29a1-203ENSMUST00000097317 1931 ntAPPRIS ALT2 TSL 1 (best) BASIC18.53■□□□□ 0.56
Cpsf1Q9EPU4 Tomm70a-201ENSMUST00000166897 3778 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cpsf1Q9EPU4 Gm10097-201ENSMUST00000180100 2784 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
Cpsf1Q9EPU4 Pdss2-202ENSMUST00000159139 1467 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cpsf1Q9EPU4 Zbtb20-203ENSMUST00000114691 2891 ntAPPRIS ALT1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cpsf1Q9EPU4 Glrx3-203ENSMUST00000211496 3440 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cpsf1Q9EPU4 Mrm3-201ENSMUST00000040577 1510 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
Cpsf1Q9EPU4 Pigq-209ENSMUST00000140304 1835 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cpsf1Q9EPU4 A430005L14Rik-202ENSMUST00000105645 977 ntTSL 3 BASIC18.52■□□□□ 0.56
Cpsf1Q9EPU4 Arl5c-202ENSMUST00000107563 823 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cpsf1Q9EPU4 Timm10-202ENSMUST00000111631 564 ntAPPRIS P1 TSL 3 BASIC18.52■□□□□ 0.56
Cpsf1Q9EPU4 Tspan5-202ENSMUST00000119993 2107 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Cpsf1Q9EPU4 Gm12363-201ENSMUST00000122250 668 ntBASIC18.52■□□□□ 0.56
Cpsf1Q9EPU4 Gm15351-201ENSMUST00000123920 419 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
Retrieved 100 of 76,532 protein–RNA pairs in 38.8 ms