Protein–RNA interactions for Protein: Q9D0R4

Ddx56, Probable ATP-dependent RNA helicase DDX56, mousemouse

Known RBP Predictions only

Length 546 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Ddx56Q9D0R4 Bag6-203ENSMUST00000172571 3599 ntTSL 5 BASIC14.33□□□□□ -0.12
Ddx56Q9D0R4 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx56Q9D0R4 AI480526-202ENSMUST00000159637 1697 ntTSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx56Q9D0R4 Rnf114-201ENSMUST00000078050 2502 ntAPPRIS P1 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx56Q9D0R4 Nfasc-201ENSMUST00000043189 5072 ntAPPRIS ALT2 TSL 1 (best) BASIC14.33□□□□□ -0.12
Ddx56Q9D0R4 Col25a1-201ENSMUST00000080335 2624 ntAPPRIS P4 TSL 5 BASIC14.32□□□□□ -0.12
Ddx56Q9D0R4 Gm16534-201ENSMUST00000149300 1492 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx56Q9D0R4 B3gntl1-201ENSMUST00000062654 1488 ntAPPRIS ALT2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx56Q9D0R4 Psmd2-201ENSMUST00000007212 2961 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx56Q9D0R4 Adamts7-202ENSMUST00000113060 5098 ntAPPRIS P3 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx56Q9D0R4 Tpr-201ENSMUST00000119161 7480 ntAPPRIS ALT2 TSL 5 BASIC14.32□□□□□ -0.12
Ddx56Q9D0R4 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx56Q9D0R4 Gdf10-201ENSMUST00000168727 5210 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx56Q9D0R4 Mmp21-201ENSMUST00000033278 1858 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx56Q9D0R4 Prkg1-202ENSMUST00000073581 2841 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx56Q9D0R4 Pcdha6-202ENSMUST00000193777 5367 ntAPPRIS P2 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx56Q9D0R4 Gm15321-201ENSMUST00000121290 288 ntBASIC14.32□□□□□ -0.12
Ddx56Q9D0R4 2900022M07Rik-201ENSMUST00000193912 1017 ntBASIC14.32□□□□□ -0.12
Ddx56Q9D0R4 Gm39228-201ENSMUST00000212456 301 ntTSL 5 BASIC14.32□□□□□ -0.12
Ddx56Q9D0R4 Gm11149-204ENSMUST00000216483 1275 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx56Q9D0R4 AC153937.1-201ENSMUST00000218734 412 ntBASIC14.32□□□□□ -0.12
Ddx56Q9D0R4 AC154621.1-201ENSMUST00000226155 1119 ntBASIC14.32□□□□□ -0.12
Ddx56Q9D0R4 Gm9797-201ENSMUST00000052902 613 ntBASIC14.32□□□□□ -0.12
Ddx56Q9D0R4 Olfr1412-201ENSMUST00000062964 966 ntAPPRIS P1 BASIC14.32□□□□□ -0.12
Ddx56Q9D0R4 Hist1h2al-201ENSMUST00000091708 339 ntBASIC14.32□□□□□ -0.12
Ddx56Q9D0R4 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx56Q9D0R4 Gm38037-201ENSMUST00000192600 1624 ntBASIC14.32□□□□□ -0.12
Ddx56Q9D0R4 Rab18-201ENSMUST00000097680 2257 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx56Q9D0R4 Nipa2-204ENSMUST00000119201 3925 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx56Q9D0R4 Syt7-204ENSMUST00000223586 1344 ntBASIC14.32□□□□□ -0.12
Ddx56Q9D0R4 Nos1ap-202ENSMUST00000160456 3022 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Ddx56Q9D0R4 Rangap1-202ENSMUST00000170134 3002 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx56Q9D0R4 Tbx4-201ENSMUST00000000096 3011 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx56Q9D0R4 Hadhb-201ENSMUST00000026841 2033 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx56Q9D0R4 Pdia4-201ENSMUST00000077290 2399 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx56Q9D0R4 Tbc1d4-209ENSMUST00000161991 6483 ntAPPRIS P2 TSL 5 BASIC14.32□□□□□ -0.12
Ddx56Q9D0R4 Olfr322-204ENSMUST00000214392 4779 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ddx56Q9D0R4 Slc52a3-202ENSMUST00000109858 2094 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx56Q9D0R4 Gpr19-204ENSMUST00000116515 2075 ntTSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx56Q9D0R4 Hist1h2be-202ENSMUST00000091704 2480 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx56Q9D0R4 Foxj2-202ENSMUST00000177927 4620 ntAPPRIS P1 TSL 5 BASIC14.32□□□□□ -0.12
Ddx56Q9D0R4 Decr2-201ENSMUST00000040907 2187 ntAPPRIS P1 TSL 1 (best) BASIC14.32□□□□□ -0.12
Ddx56Q9D0R4 Car6-202ENSMUST00000105683 1460 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx56Q9D0R4 Chp1-201ENSMUST00000014221 2609 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx56Q9D0R4 Ggt7-201ENSMUST00000029131 2614 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx56Q9D0R4 Abtb2-201ENSMUST00000076212 4558 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx56Q9D0R4 Kcnk13-204ENSMUST00000177549 3075 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ddx56Q9D0R4 Pou4f3-201ENSMUST00000025374 2360 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx56Q9D0R4 Abat-203ENSMUST00000115839 2414 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx56Q9D0R4 CT030684.3-201ENSMUST00000227308 2445 ntBASIC14.31□□□□□ -0.12
Ddx56Q9D0R4 Adamts20-204ENSMUST00000155907 6886 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx56Q9D0R4 Stxbp2-207ENSMUST00000160708 2908 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx56Q9D0R4 Plch2-201ENSMUST00000105631 5053 ntAPPRIS ALT2 TSL 5 BASIC14.31□□□□□ -0.12
Ddx56Q9D0R4 Mbp-207ENSMUST00000114674 2108 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx56Q9D0R4 Gm14057-201ENSMUST00000120631 482 ntBASIC14.31□□□□□ -0.12
Ddx56Q9D0R4 Tac2-202ENSMUST00000179960 852 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx56Q9D0R4 Wdyhv1-203ENSMUST00000226889 394 ntBASIC14.31□□□□□ -0.12
Ddx56Q9D0R4 Tac2-201ENSMUST00000026466 678 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx56Q9D0R4 Olfr222-201ENSMUST00000071943 1115 ntAPPRIS P1 BASIC14.31□□□□□ -0.12
Ddx56Q9D0R4 Arrdc5-201ENSMUST00000097303 1054 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx56Q9D0R4 Mpv17-201ENSMUST00000154241 1724 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx56Q9D0R4 Olfr61-202ENSMUST00000210241 1348 ntAPPRIS P1 TSL 5 BASIC14.31□□□□□ -0.12
Ddx56Q9D0R4 Phactr3-203ENSMUST00000108915 2694 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx56Q9D0R4 Phactr3-204ENSMUST00000108916 2656 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx56Q9D0R4 Acp5-201ENSMUST00000069330 1356 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx56Q9D0R4 4632404H12Rik-201ENSMUST00000038450 2791 ntTSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx56Q9D0R4 Nrxn1-201ENSMUST00000054059 4697 ntTSL 5 BASIC14.31□□□□□ -0.12
Ddx56Q9D0R4 Eml3-201ENSMUST00000096241 3322 ntAPPRIS P2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx56Q9D0R4 Gigyf2-201ENSMUST00000027475 5724 ntAPPRIS P3 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx56Q9D0R4 Desi1-206ENSMUST00000152227 2934 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx56Q9D0R4 1700065D16Rik-205ENSMUST00000190890 2903 ntBASIC14.31□□□□□ -0.12
Ddx56Q9D0R4 Sema4b-201ENSMUST00000032754 3949 ntAPPRIS P1 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx56Q9D0R4 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx56Q9D0R4 Umad1-204ENSMUST00000159433 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC14.31□□□□□ -0.12
Ddx56Q9D0R4 Shc4-203ENSMUST00000110480 3671 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx56Q9D0R4 Naaa-202ENSMUST00000159345 1629 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx56Q9D0R4 Eno2-216ENSMUST00000204896 1640 ntTSL 5 BASIC14.3□□□□□ -0.12
Ddx56Q9D0R4 Tcirg1-211ENSMUST00000145791 2729 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx56Q9D0R4 Rad23b-201ENSMUST00000030134 3810 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx56Q9D0R4 Gm13016-201ENSMUST00000126252 1720 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx56Q9D0R4 Tex19.1-201ENSMUST00000039088 1745 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx56Q9D0R4 Lysmd4-201ENSMUST00000058771 2898 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx56Q9D0R4 Zyg11b-201ENSMUST00000043616 8691 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx56Q9D0R4 Dnajb5-204ENSMUST00000107973 2300 ntAPPRIS P2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx56Q9D0R4 Gm13857-203ENSMUST00000150561 2337 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx56Q9D0R4 Myef2-207ENSMUST00000147105 2928 ntAPPRIS ALT2 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx56Q9D0R4 Hapln4-201ENSMUST00000007738 3648 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx56Q9D0R4 Mmp2-201ENSMUST00000034187 3078 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx56Q9D0R4 Spock1-205ENSMUST00000187852 3113 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx56Q9D0R4 Ltc4s-202ENSMUST00000102772 649 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx56Q9D0R4 Gm10327-201ENSMUST00000105222 1002 ntBASIC14.3□□□□□ -0.12
Ddx56Q9D0R4 Mif4gd-202ENSMUST00000106506 993 ntTSL 3 BASIC14.3□□□□□ -0.12
Ddx56Q9D0R4 Gm14730-201ENSMUST00000122378 1045 ntBASIC14.3□□□□□ -0.12
Ddx56Q9D0R4 Sec22b-203ENSMUST00000130620 640 ntTSL 2 BASIC14.3□□□□□ -0.12
Ddx56Q9D0R4 Synj2bp-205ENSMUST00000169158 691 ntTSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx56Q9D0R4 Gm5069-202ENSMUST00000192714 1011 ntBASIC14.3□□□□□ -0.12
Ddx56Q9D0R4 Gm7498-201ENSMUST00000203282 1084 ntBASIC14.3□□□□□ -0.12
Ddx56Q9D0R4 Gm31105-201ENSMUST00000211421 687 ntTSL 2 BASIC14.3□□□□□ -0.12
Ddx56Q9D0R4 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC14.3□□□□□ -0.12
Ddx56Q9D0R4 Tpd52-201ENSMUST00000063496 697 ntTSL 2 BASIC14.3□□□□□ -0.12
Retrieved 100 of 76,532 protein–RNA pairs in 32.1 ms