Protein–RNA interactions for Protein: Q9CQE8

RTRAF, RNA transcription, translation and transport factor protein, mousemouse

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTRAFQ9CQE8 Gm26608-201ENSMUST00000180740 1954 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
RTRAFQ9CQE8 Rapgef2-206ENSMUST00000195708 6964 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
RTRAFQ9CQE8 Pafah1b2-201ENSMUST00000172450 6873 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RTRAFQ9CQE8 Txlna-202ENSMUST00000084264 4847 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RTRAFQ9CQE8 Zfp385c-201ENSMUST00000103119 2766 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RTRAFQ9CQE8 Hmgn2-204ENSMUST00000105893 973 ntTSL 3 BASIC11.05□□□□□ -0.64
RTRAFQ9CQE8 Tnk1-203ENSMUST00000108628 2450 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
RTRAFQ9CQE8 Fbxo8-202ENSMUST00000110322 1709 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
RTRAFQ9CQE8 Crybb2-202ENSMUST00000112336 906 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RTRAFQ9CQE8 Miga2-208ENSMUST00000140075 2196 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
RTRAFQ9CQE8 Gm15635-203ENSMUST00000148972 554 ntTSL 2 BASIC11.05□□□□□ -0.64
RTRAFQ9CQE8 Slc36a3os-201ENSMUST00000155883 520 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
RTRAFQ9CQE8 Gria4-203ENSMUST00000163309 2338 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
RTRAFQ9CQE8 Npepps-219ENSMUST00000172108 2924 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
RTRAFQ9CQE8 Erdr1-202ENSMUST00000177671 708 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
RTRAFQ9CQE8 Klf13-204ENSMUST00000185175 487 ntTSL 2 BASIC11.05□□□□□ -0.64
RTRAFQ9CQE8 AC148328.1-201ENSMUST00000216448 920 ntTSL 5 BASIC11.05□□□□□ -0.64
RTRAFQ9CQE8 Gm20337-201ENSMUST00000219062 1118 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
RTRAFQ9CQE8 AC154471.1-201ENSMUST00000224418 436 ntBASIC11.05□□□□□ -0.64
RTRAFQ9CQE8 Mrps18a-201ENSMUST00000024763 884 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RTRAFQ9CQE8 Jmjd1c-211ENSMUST00000174408 8377 ntAPPRIS ALT2 TSL 5 BASIC11.05□□□□□ -0.64
RTRAFQ9CQE8 Jmjd1c-201ENSMUST00000051446 8382 ntAPPRIS P4 TSL 5 BASIC11.05□□□□□ -0.64
RTRAFQ9CQE8 Numa1-201ENSMUST00000084852 7180 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RTRAFQ9CQE8 Hk2-201ENSMUST00000000642 5513 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RTRAFQ9CQE8 Tmem132a-202ENSMUST00000120524 3895 ntTSL 5 BASIC11.05□□□□□ -0.64
RTRAFQ9CQE8 Ap2a1-201ENSMUST00000085399 3442 ntAPPRIS P1 TSL 5 BASIC11.05□□□□□ -0.64
RTRAFQ9CQE8 Eef1d-206ENSMUST00000109975 2842 ntTSL 5 BASIC11.05□□□□□ -0.64
RTRAFQ9CQE8 Banp-204ENSMUST00000170857 5444 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
RTRAFQ9CQE8 4931414P19Rik-201ENSMUST00000022786 2670 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RTRAFQ9CQE8 Lmod3-201ENSMUST00000095655 2215 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RTRAFQ9CQE8 2410002F23Rik-203ENSMUST00000084937 2092 ntAPPRIS P2 TSL 2 BASIC11.05□□□□□ -0.64
RTRAFQ9CQE8 Prnd-203ENSMUST00000110171 1938 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RTRAFQ9CQE8 Nsun7-204ENSMUST00000202994 3632 ntTSL 1 (best) BASIC11.05□□□□□ -0.64
RTRAFQ9CQE8 Gm13730-201ENSMUST00000121036 1462 ntBASIC11.05□□□□□ -0.64
RTRAFQ9CQE8 Csrnp2-201ENSMUST00000061457 4126 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RTRAFQ9CQE8 Gm5366-201ENSMUST00000215494 1338 ntBASIC11.05□□□□□ -0.64
RTRAFQ9CQE8 Astl-202ENSMUST00000089673 2251 ntAPPRIS ALT2 TSL 1 (best) BASIC11.05□□□□□ -0.64
RTRAFQ9CQE8 Adora1-202ENSMUST00000086465 4968 ntAPPRIS P1 TSL 1 (best) BASIC11.05□□□□□ -0.64
RTRAFQ9CQE8 Ubqln1-202ENSMUST00000076454 3561 ntAPPRIS P3 TSL 1 (best) BASIC11.05□□□□□ -0.64
RTRAFQ9CQE8 Epm2aip1-202ENSMUST00000135807 4245 ntAPPRIS P1 TSL 2 BASIC11.05□□□□□ -0.64
RTRAFQ9CQE8 Mks1-201ENSMUST00000038196 2499 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RTRAFQ9CQE8 Gm16244-201ENSMUST00000159313 2327 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
RTRAFQ9CQE8 Akirin2-201ENSMUST00000084299 1397 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RTRAFQ9CQE8 Kiss1r-201ENSMUST00000045529 3163 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RTRAFQ9CQE8 BC030867-201ENSMUST00000100392 2547 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RTRAFQ9CQE8 Extl3-201ENSMUST00000022550 5977 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
RTRAFQ9CQE8 Tjap1-203ENSMUST00000180283 2368 ntAPPRIS P2 TSL 5 BASIC11.04□□□□□ -0.64
RTRAFQ9CQE8 Sgk3-202ENSMUST00000166384 3706 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RTRAFQ9CQE8 Adcyap1r1-206ENSMUST00000167234 1575 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
RTRAFQ9CQE8 Nif3l1-206ENSMUST00000171597 2098 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RTRAFQ9CQE8 Psmc4-201ENSMUST00000032824 1440 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RTRAFQ9CQE8 Ddah1-201ENSMUST00000029845 3764 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RTRAFQ9CQE8 Spock1-206ENSMUST00000189373 3128 ntTSL 5 BASIC11.04□□□□□ -0.64
RTRAFQ9CQE8 Trp53-203ENSMUST00000108658 1771 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
RTRAFQ9CQE8 Trp53-201ENSMUST00000005371 1772 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
RTRAFQ9CQE8 1700025G04Rik-201ENSMUST00000044581 9559 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RTRAFQ9CQE8 Gm25990-201ENSMUST00000102440 86 ntBASIC11.04□□□□□ -0.64
RTRAFQ9CQE8 Dbndd2-204ENSMUST00000109350 1055 ntAPPRIS P1 TSL 2 BASIC11.04□□□□□ -0.64
RTRAFQ9CQE8 Grtp1-201ENSMUST00000165605 1271 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
RTRAFQ9CQE8 Olfr1344-201ENSMUST00000168341 1061 ntAPPRIS P1 BASIC11.04□□□□□ -0.64
RTRAFQ9CQE8 Ccer2-201ENSMUST00000178767 1054 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
RTRAFQ9CQE8 Rbm14-203ENSMUST00000180008 370 ntTSL 5 BASIC11.04□□□□□ -0.64
RTRAFQ9CQE8 Gm43935-201ENSMUST00000203569 1050 ntBASIC11.04□□□□□ -0.64
RTRAFQ9CQE8 Ins2-209ENSMUST00000210288 918 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
RTRAFQ9CQE8 A330070K13Rik-201ENSMUST00000063656 633 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RTRAFQ9CQE8 Dmrt1-202ENSMUST00000087525 1130 ntTSL 5 BASIC11.04□□□□□ -0.64
RTRAFQ9CQE8 Rccd1-201ENSMUST00000047362 3336 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RTRAFQ9CQE8 2810006K23Rik-202ENSMUST00000111477 1637 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
RTRAFQ9CQE8 Zfyve1-203ENSMUST00000221919 4420 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RTRAFQ9CQE8 Podn-201ENSMUST00000044248 2885 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
RTRAFQ9CQE8 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC11.04□□□□□ -0.64
RTRAFQ9CQE8 Ntm-203ENSMUST00000115237 2039 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RTRAFQ9CQE8 Psrc1-202ENSMUST00000102629 1687 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RTRAFQ9CQE8 Mef2b-203ENSMUST00000110143 1312 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
RTRAFQ9CQE8 Abca7-203ENSMUST00000171637 6638 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
RTRAFQ9CQE8 Sacs-202ENSMUST00000119509 3468 ntAPPRIS ALT2 TSL 5 BASIC11.04□□□□□ -0.64
RTRAFQ9CQE8 Sema4a-213ENSMUST00000165898 3125 ntAPPRIS P1 TSL 5 BASIC11.04□□□□□ -0.64
RTRAFQ9CQE8 Rpl21-201ENSMUST00000035983 1856 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RTRAFQ9CQE8 Slc6a19os-201ENSMUST00000022049 1532 ntTSL 1 (best) BASIC11.04□□□□□ -0.64
RTRAFQ9CQE8 Nol4-206ENSMUST00000164186 2622 ntAPPRIS P4 TSL 5 BASIC11.04□□□□□ -0.64
RTRAFQ9CQE8 Shroom1-201ENSMUST00000018531 2630 ntAPPRIS ALT2 TSL 1 (best) BASIC11.04□□□□□ -0.64
RTRAFQ9CQE8 Gpr17-201ENSMUST00000064016 5195 ntAPPRIS P1 TSL 1 (best) BASIC11.04□□□□□ -0.64
RTRAFQ9CQE8 Gm6211-201ENSMUST00000147973 4275 ntBASIC11.04□□□□□ -0.64
RTRAFQ9CQE8 Egfl7-202ENSMUST00000102907 1372 ntAPPRIS P4 TSL 1 (best) BASIC11.03□□□□□ -0.64
RTRAFQ9CQE8 Zpbp2-204ENSMUST00000107511 1395 ntAPPRIS ALT2 TSL 1 (best) BASIC11.03□□□□□ -0.64
RTRAFQ9CQE8 Lancl1-203ENSMUST00000119559 1385 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RTRAFQ9CQE8 Dnmbp-201ENSMUST00000026209 4882 ntAPPRIS P2 TSL 2 BASIC11.03□□□□□ -0.64
RTRAFQ9CQE8 Gm45706-201ENSMUST00000213063 2136 ntBASIC11.03□□□□□ -0.64
RTRAFQ9CQE8 2810430I11Rik-201ENSMUST00000154246 3416 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
RTRAFQ9CQE8 Pdxk-ps-201ENSMUST00000159650 2342 ntTSL 1 (best) BASIC11.03□□□□□ -0.64
RTRAFQ9CQE8 Dlg4-203ENSMUST00000108588 3457 ntAPPRIS ALT1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RTRAFQ9CQE8 Tmem181a-201ENSMUST00000088940 4405 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RTRAFQ9CQE8 Trim27-205ENSMUST00000221464 1400 ntTSL 5 BASIC11.03□□□□□ -0.64
RTRAFQ9CQE8 Neurl3-201ENSMUST00000056946 2598 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RTRAFQ9CQE8 Oas1e-201ENSMUST00000100785 1801 ntAPPRIS P3 TSL 1 (best) BASIC11.03□□□□□ -0.64
RTRAFQ9CQE8 Gm10728-201ENSMUST00000194292 1829 ntBASIC11.03□□□□□ -0.64
RTRAFQ9CQE8 Dct-201ENSMUST00000022725 2202 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RTRAFQ9CQE8 Cd163l1-204ENSMUST00000209637 3210 ntAPPRIS P2 TSL 1 (best) BASIC11.03□□□□□ -0.64
RTRAFQ9CQE8 Car4-201ENSMUST00000103194 1256 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
RTRAFQ9CQE8 Zglp1-201ENSMUST00000115494 1010 ntAPPRIS P1 TSL 1 (best) BASIC11.03□□□□□ -0.64
Retrieved 100 of 76,532 protein–RNA pairs in 38.9 ms