Protein–RNA interactions for Protein: Q99PP7

Trim33, E3 ubiquitin-protein ligase TRIM33, mousemouse

Predictions only

Length 1,142 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Trim33Q99PP7 Krtap6-5-201ENSMUST00000074637 600 ntAPPRIS P1 BASIC13.56□□□□□ -0.24
Trim33Q99PP7 Mir497b-201ENSMUST00000093601 125 ntBASIC13.56□□□□□ -0.24
Trim33Q99PP7 Dnm1-203ENSMUST00000113350 3258 ntAPPRIS ALT1 TSL 5 BASIC13.56□□□□□ -0.24
Trim33Q99PP7 Ncdn-202ENSMUST00000106116 2434 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim33Q99PP7 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.56□□□□□ -0.24
Trim33Q99PP7 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.56□□□□□ -0.24
Trim33Q99PP7 4930423C22Rik-201ENSMUST00000193863 1311 ntBASIC13.56□□□□□ -0.24
Trim33Q99PP7 Steap2-203ENSMUST00000115425 4550 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim33Q99PP7 Tmem181b-ps-203ENSMUST00000188746 1626 ntTSL 5 BASIC13.56□□□□□ -0.24
Trim33Q99PP7 Rnf10-201ENSMUST00000040555 3106 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim33Q99PP7 Prrt3-202ENSMUST00000204134 3424 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim33Q99PP7 Ccdc92b-201ENSMUST00000100866 4002 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim33Q99PP7 Dnmt1-207ENSMUST00000216540 5543 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim33Q99PP7 Samd4b-204ENSMUST00000208199 4391 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trim33Q99PP7 Rnf10-203ENSMUST00000112097 3476 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim33Q99PP7 Acat2-201ENSMUST00000007005 2250 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim33Q99PP7 Enpp6-202ENSMUST00000119686 1390 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim33Q99PP7 Psap-202ENSMUST00000105465 2646 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim33Q99PP7 Ist1-201ENSMUST00000034164 2304 ntAPPRIS P1 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim33Q99PP7 Tnrc6c-201ENSMUST00000026658 8724 ntAPPRIS P1 TSL 5 BASIC13.56□□□□□ -0.24
Trim33Q99PP7 Mark2-201ENSMUST00000025921 3018 ntAPPRIS ALT2 TSL 1 (best) BASIC13.56□□□□□ -0.24
Trim33Q99PP7 Mgat3-201ENSMUST00000044970 4665 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim33Q99PP7 Dlst-201ENSMUST00000053811 2764 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim33Q99PP7 Acox3-204ENSMUST00000114238 2825 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim33Q99PP7 Lin54-208ENSMUST00000149714 3869 ntTSL 5 BASIC13.55□□□□□ -0.24
Trim33Q99PP7 Gm42471-201ENSMUST00000201457 1865 ntBASIC13.55□□□□□ -0.24
Trim33Q99PP7 Wdr36-202ENSMUST00000166214 2942 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim33Q99PP7 Prkacb-202ENSMUST00000102515 4347 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim33Q99PP7 Zfp276-201ENSMUST00000001092 4071 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim33Q99PP7 Camk2d-202ENSMUST00000066466 4075 ntAPPRIS ALT1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim33Q99PP7 Cep164-201ENSMUST00000117194 5541 ntAPPRIS P2 TSL 5 BASIC13.55□□□□□ -0.24
Trim33Q99PP7 Eef1akmt4-201ENSMUST00000115522 1130 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim33Q99PP7 Dancr-202ENSMUST00000120364 575 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim33Q99PP7 H60b-202ENSMUST00000131558 1080 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trim33Q99PP7 Cmc4-203ENSMUST00000149863 507 ntAPPRIS P1 TSL 3 BASIC13.55□□□□□ -0.24
Trim33Q99PP7 Fam219aos-201ENSMUST00000151164 708 ntTSL 2 BASIC13.55□□□□□ -0.24
Trim33Q99PP7 Pax8-208ENSMUST00000153601 1226 ntTSL 5 BASIC13.55□□□□□ -0.24
Trim33Q99PP7 Gm9522-201ENSMUST00000182394 926 ntBASIC13.55□□□□□ -0.24
Trim33Q99PP7 Tcta-203ENSMUST00000195615 597 ntTSL 5 BASIC13.55□□□□□ -0.24
Trim33Q99PP7 Coa6-202ENSMUST00000211868 564 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim33Q99PP7 Mrpl36-201ENSMUST00000022098 923 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim33Q99PP7 S100a13-201ENSMUST00000048138 715 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim33Q99PP7 Ppfia4-201ENSMUST00000168515 6067 ntAPPRIS P2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim33Q99PP7 Nup62-203ENSMUST00000207103 2414 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim33Q99PP7 Ppp1r15a-202ENSMUST00000167273 2809 ntAPPRIS P1 TSL 2 BASIC13.55□□□□□ -0.24
Trim33Q99PP7 Slc7a7-202ENSMUST00000195970 2057 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trim33Q99PP7 Osbpl1a-201ENSMUST00000074352 3956 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim33Q99PP7 Six3os1-211ENSMUST00000176958 2889 ntTSL 2 BASIC13.55□□□□□ -0.24
Trim33Q99PP7 Rinl-206ENSMUST00000209035 2898 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim33Q99PP7 Fggy-203ENSMUST00000107091 1395 ntTSL 5 BASIC13.55□□□□□ -0.24
Trim33Q99PP7 Cd300lf-203ENSMUST00000106562 1762 ntTSL 1 (best) BASIC13.55□□□□□ -0.24
Trim33Q99PP7 Arhgef2-229ENSMUST00000177303 3000 ntAPPRIS ALT2 TSL 5 BASIC13.55□□□□□ -0.24
Trim33Q99PP7 Zfp444-204ENSMUST00000108567 5104 ntAPPRIS P1 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim33Q99PP7 Gtf2ird1-229ENSMUST00000202554 3514 ntAPPRIS ALT2 TSL 1 (best) BASIC13.55□□□□□ -0.24
Trim33Q99PP7 Fam214b-202ENSMUST00000107956 3107 ntAPPRIS P1 TSL 5 BASIC13.55□□□□□ -0.24
Trim33Q99PP7 Tmem30a-201ENSMUST00000034878 3658 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim33Q99PP7 Tmem169-201ENSMUST00000027380 2928 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim33Q99PP7 Zscan22-203ENSMUST00000119989 2087 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim33Q99PP7 Pgghg-204ENSMUST00000164580 3001 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trim33Q99PP7 Kcnk16-202ENSMUST00000225596 2127 ntBASIC13.54□□□□□ -0.24
Trim33Q99PP7 Tle3-204ENSMUST00000159386 4527 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trim33Q99PP7 Dnm1-214ENSMUST00000201433 3146 ntAPPRIS ALT1 TSL 5 BASIC13.54□□□□□ -0.24
Trim33Q99PP7 Sim2-201ENSMUST00000072182 3670 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim33Q99PP7 Irf7-203ENSMUST00000106023 2237 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim33Q99PP7 Vamp2-201ENSMUST00000021273 2205 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim33Q99PP7 Adam22-203ENSMUST00000088744 9245 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trim33Q99PP7 Wfdc3-201ENSMUST00000103096 911 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim33Q99PP7 Rgs19-203ENSMUST00000108771 1110 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim33Q99PP7 Rgs19-205ENSMUST00000108776 1216 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim33Q99PP7 Gm6754-201ENSMUST00000117124 913 ntBASIC13.54□□□□□ -0.24
Trim33Q99PP7 Chchd7-208ENSMUST00000121651 620 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim33Q99PP7 Gm20661-203ENSMUST00000177368 900 ntAPPRIS P1 TSL 2 BASIC13.54□□□□□ -0.24
Trim33Q99PP7 Gm24694-201ENSMUST00000180054 110 ntBASIC13.54□□□□□ -0.24
Trim33Q99PP7 Gm2445-201ENSMUST00000182798 989 ntBASIC13.54□□□□□ -0.24
Trim33Q99PP7 Gm27663-201ENSMUST00000184839 110 ntBASIC13.54□□□□□ -0.24
Trim33Q99PP7 Tmem129-204ENSMUST00000200849 657 ntTSL 3 BASIC13.54□□□□□ -0.24
Trim33Q99PP7 Gm5425-201ENSMUST00000214125 459 ntBASIC13.54□□□□□ -0.24
Trim33Q99PP7 Chchd7-201ENSMUST00000041122 672 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim33Q99PP7 Gm20445-201ENSMUST00000061905 565 ntBASIC13.54□□□□□ -0.24
Trim33Q99PP7 Prtn3-201ENSMUST00000006679 1025 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim33Q99PP7 Ncam2-201ENSMUST00000037785 4893 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim33Q99PP7 Gnb5-202ENSMUST00000213990 1803 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim33Q99PP7 Gm42941-201ENSMUST00000200347 1321 ntBASIC13.54□□□□□ -0.24
Trim33Q99PP7 Syt7-204ENSMUST00000223586 1344 ntBASIC13.54□□□□□ -0.24
Trim33Q99PP7 Patz1-207ENSMUST00000134089 1904 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim33Q99PP7 Il15-201ENSMUST00000034148 1908 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim33Q99PP7 A530020G20Rik-202ENSMUST00000181070 3660 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim33Q99PP7 Gm6871-201ENSMUST00000073410 1430 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Trim33Q99PP7 Zc3h4-201ENSMUST00000098789 6039 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Trim33Q99PP7 Cmpk1-201ENSMUST00000030491 3170 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim33Q99PP7 Efemp1-201ENSMUST00000020759 2037 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim33Q99PP7 Tpk1-201ENSMUST00000067888 2671 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim33Q99PP7 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim33Q99PP7 Speg-205ENSMUST00000113590 3393 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Trim33Q99PP7 Dnaaf2-201ENSMUST00000021356 3390 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim33Q99PP7 Larp1b-205ENSMUST00000191805 1581 ntAPPRIS P2 TSL 5 BASIC13.54□□□□□ -0.24
Trim33Q99PP7 Mob3c-201ENSMUST00000030477 2884 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Trim33Q99PP7 Susd2-201ENSMUST00000077610 2275 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Trim33Q99PP7 Ubiad1-201ENSMUST00000051633 2992 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Trim33Q99PP7 Gm12404-201ENSMUST00000122839 1661 ntTSL 5 BASIC13.53□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 46.7 ms