Protein–RNA interactions for Protein: Q99PJ1

Pcdh15, Protocadherin-15, mousemouse

Predictions only

Length 1,943 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Pcdh15Q99PJ1 Rassf10-201ENSMUST00000182858 3496 ntAPPRIS P1 BASIC15.02■□□□□ -0
Pcdh15Q99PJ1 Bclaf3-202ENSMUST00000112464 3366 ntAPPRIS P2 TSL 1 (best) BASIC15.02■□□□□ -0
Pcdh15Q99PJ1 H3f3b-202ENSMUST00000106454 2514 ntAPPRIS P1 TSL 5 BASIC15.02■□□□□ -0
Pcdh15Q99PJ1 Jhy-201ENSMUST00000034521 3074 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Pcdh15Q99PJ1 Fubp1-205ENSMUST00000196695 2374 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh15Q99PJ1 Nmt2-202ENSMUST00000091504 1676 ntTSL 5 BASIC15.02□□□□□ -0.01
Pcdh15Q99PJ1 Fgfr1-215ENSMUST00000179592 5041 ntTSL 5 BASIC15.02□□□□□ -0.01
Pcdh15Q99PJ1 Unc5a-202ENSMUST00000109994 3827 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh15Q99PJ1 Cep89-201ENSMUST00000079414 2610 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh15Q99PJ1 Gm42872-201ENSMUST00000200026 1967 ntBASIC15.02□□□□□ -0.01
Pcdh15Q99PJ1 Fcna-201ENSMUST00000028307 1374 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh15Q99PJ1 Strn4-201ENSMUST00000019220 3535 ntAPPRIS P4 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh15Q99PJ1 Ttc4-202ENSMUST00000106772 935 ntAPPRIS ALT2 TSL 5 BASIC15.02□□□□□ -0.01
Pcdh15Q99PJ1 Cav2-202ENSMUST00000115459 974 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh15Q99PJ1 Gm17391-201ENSMUST00000171036 126 ntBASIC15.02□□□□□ -0.01
Pcdh15Q99PJ1 Rpl36-ps4-201ENSMUST00000179601 354 ntAPPRIS P1 TSL 5 BASIC15.02□□□□□ -0.01
Pcdh15Q99PJ1 Gm9061-201ENSMUST00000182707 1006 ntBASIC15.02□□□□□ -0.01
Pcdh15Q99PJ1 AC154849.4-201ENSMUST00000224868 365 ntBASIC15.02□□□□□ -0.01
Pcdh15Q99PJ1 Tmem116-201ENSMUST00000031405 1288 ntAPPRIS ALT2 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh15Q99PJ1 Gm11924-201ENSMUST00000152306 1750 ntTSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh15Q99PJ1 Ywhaz-203ENSMUST00000110361 2285 ntAPPRIS P1 TSL 1 (best) BASIC15.02□□□□□ -0.01
Pcdh15Q99PJ1 Serpinb13-201ENSMUST00000027564 1607 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh15Q99PJ1 Hes2-201ENSMUST00000030782 2521 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh15Q99PJ1 Ccdc163-201ENSMUST00000030452 1524 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Pcdh15Q99PJ1 Kcnh2-202ENSMUST00000115098 3193 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh15Q99PJ1 Kmt2b-201ENSMUST00000006470 8469 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Pcdh15Q99PJ1 Cpq-207ENSMUST00000228916 1842 ntAPPRIS P1 BASIC15.01□□□□□ -0.01
Pcdh15Q99PJ1 Gdf9-201ENSMUST00000018382 1793 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh15Q99PJ1 A630076J17Rik-201ENSMUST00000179399 1358 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh15Q99PJ1 Brap-201ENSMUST00000031414 3744 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh15Q99PJ1 Olfr1156-203ENSMUST00000216726 3271 ntAPPRIS P1 TSL 5 BASIC15.01□□□□□ -0.01
Pcdh15Q99PJ1 Serinc1-201ENSMUST00000020027 2880 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh15Q99PJ1 Mmp14-206ENSMUST00000225641 3238 ntBASIC15.01□□□□□ -0.01
Pcdh15Q99PJ1 Plppr5-201ENSMUST00000039564 4670 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh15Q99PJ1 Gosr2-202ENSMUST00000107013 1044 ntTSL 2 BASIC15.01□□□□□ -0.01
Pcdh15Q99PJ1 Pax5-204ENSMUST00000107826 1228 ntTSL 5 BASIC15.01□□□□□ -0.01
Pcdh15Q99PJ1 Gm13611-201ENSMUST00000118269 318 ntBASIC15.01□□□□□ -0.01
Pcdh15Q99PJ1 1700001G11Rik-203ENSMUST00000153646 764 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh15Q99PJ1 Gm43416-201ENSMUST00000201916 1015 ntBASIC15.01□□□□□ -0.01
Pcdh15Q99PJ1 Brsk1-205ENSMUST00000206024 1216 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh15Q99PJ1 Repin1-204ENSMUST00000135151 3057 ntAPPRIS ALT2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh15Q99PJ1 Fbxl19-201ENSMUST00000033081 3410 ntAPPRIS P2 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh15Q99PJ1 Slc41a3-201ENSMUST00000032177 2324 ntAPPRIS P1 TSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh15Q99PJ1 Dhx58os-201ENSMUST00000137154 1594 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh15Q99PJ1 F830115B05Rik-201ENSMUST00000197638 1894 ntBASIC15.01□□□□□ -0.01
Pcdh15Q99PJ1 Map7d1-203ENSMUST00000122129 3249 ntAPPRIS ALT2 TSL 5 BASIC15.01□□□□□ -0.01
Pcdh15Q99PJ1 Gm26604-201ENSMUST00000180926 1766 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh15Q99PJ1 Tom1-201ENSMUST00000078847 1769 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh15Q99PJ1 Gm9962-202ENSMUST00000186595 1417 ntTSL 1 (best) BASIC15.01□□□□□ -0.01
Pcdh15Q99PJ1 Lmf2-201ENSMUST00000023283 2906 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh15Q99PJ1 Rcc2-201ENSMUST00000038893 3767 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh15Q99PJ1 Cdc42ep1-201ENSMUST00000059619 2542 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh15Q99PJ1 Srsf10-204ENSMUST00000105853 3058 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh15Q99PJ1 4933417C20Rik-201ENSMUST00000193962 1874 ntBASIC15□□□□□ -0.01
Pcdh15Q99PJ1 Gm10961-201ENSMUST00000106703 144 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Pcdh15Q99PJ1 Gm14064-201ENSMUST00000134833 727 ntTSL 3 BASIC15□□□□□ -0.01
Pcdh15Q99PJ1 Sap25-201ENSMUST00000166099 1101 ntAPPRIS P2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh15Q99PJ1 Krtap20-2-201ENSMUST00000169954 528 ntAPPRIS P1 BASIC15□□□□□ -0.01
Pcdh15Q99PJ1 Smpd4-223ENSMUST00000172182 516 ntTSL 3 BASIC15□□□□□ -0.01
Pcdh15Q99PJ1 Stard10-207ENSMUST00000173270 670 ntTSL 5 BASIC15□□□□□ -0.01
Pcdh15Q99PJ1 Gm39404-201ENSMUST00000216350 313 ntBASIC15□□□□□ -0.01
Pcdh15Q99PJ1 Tnfrsf19-203ENSMUST00000224371 1239 ntAPPRIS ALT2 BASIC15□□□□□ -0.01
Pcdh15Q99PJ1 Rbp2-201ENSMUST00000035029 672 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh15Q99PJ1 Olfr288-202ENSMUST00000165379 2083 ntAPPRIS P1 TSL 2 BASIC15□□□□□ -0.01
Pcdh15Q99PJ1 Chfr-207ENSMUST00000198633 2623 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh15Q99PJ1 Slc25a5-ps-202ENSMUST00000223716 1786 ntBASIC15□□□□□ -0.01
Pcdh15Q99PJ1 Rwdd2b-201ENSMUST00000039101 2009 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh15Q99PJ1 Dag1-203ENSMUST00000171412 4415 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh15Q99PJ1 Arhgap10-201ENSMUST00000076316 3084 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh15Q99PJ1 Rnf138-202ENSMUST00000072847 3002 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdh15Q99PJ1 Usp35-202ENSMUST00000168435 3982 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Pcdh15Q99PJ1 Wac-207ENSMUST00000167020 5208 ntAPPRIS P3 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh15Q99PJ1 Antxr1-205ENSMUST00000205033 3160 ntAPPRIS ALT2 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh15Q99PJ1 Prickle3-203ENSMUST00000129662 2376 ntAPPRIS ALT2 TSL 2 BASIC15□□□□□ -0.01
Pcdh15Q99PJ1 Vps51-204ENSMUST00000159832 3048 ntAPPRIS P1 TSL 5 BASIC15□□□□□ -0.01
Pcdh15Q99PJ1 Trhr2-201ENSMUST00000044123 1340 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh15Q99PJ1 Mbd6-201ENSMUST00000026476 4165 ntAPPRIS P3 TSL 5 BASIC15□□□□□ -0.01
Pcdh15Q99PJ1 Rad9a-201ENSMUST00000025740 2046 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh15Q99PJ1 Ifitm10-201ENSMUST00000059223 3412 ntTSL 1 (best) BASIC15□□□□□ -0.01
Pcdh15Q99PJ1 Ighv5-4-201ENSMUST00000103444 425 ntAPPRIS P1 BASIC15□□□□□ -0.01
Pcdh15Q99PJ1 Wdr45-206ENSMUST00000116634 1250 ntAPPRIS ALT2 TSL 5 BASIC15□□□□□ -0.01
Pcdh15Q99PJ1 Gm15131-201ENSMUST00000119124 595 ntBASIC15□□□□□ -0.01
Pcdh15Q99PJ1 Gm12291-201ENSMUST00000121627 311 ntBASIC15□□□□□ -0.01
Pcdh15Q99PJ1 Gm14965-201ENSMUST00000124118 565 ntTSL 2 BASIC15□□□□□ -0.01
Pcdh15Q99PJ1 Bnip3-203ENSMUST00000130500 719 ntTSL 2 BASIC15□□□□□ -0.01
Pcdh15Q99PJ1 Gm8365-201ENSMUST00000197334 648 ntBASIC15□□□□□ -0.01
Pcdh15Q99PJ1 Gm40576-201ENSMUST00000221773 1152 ntTSL 5 BASIC15□□□□□ -0.01
Pcdh15Q99PJ1 Rpl34-202ENSMUST00000079085 480 ntAPPRIS P1 TSL 1 (best) BASIC15□□□□□ -0.01
Pcdh15Q99PJ1 Vegfa-202ENSMUST00000071648 3451 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh15Q99PJ1 Ablim2-205ENSMUST00000114205 2579 ntAPPRIS ALT2 TSL 5 BASIC14.99□□□□□ -0.01
Pcdh15Q99PJ1 Asb10-202ENSMUST00000117900 1432 ntTSL 5 BASIC14.99□□□□□ -0.01
Pcdh15Q99PJ1 Gm10605-202ENSMUST00000183019 3198 ntBASIC14.99□□□□□ -0.01
Pcdh15Q99PJ1 Whrn-206ENSMUST00000102867 4013 ntAPPRIS ALT2 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh15Q99PJ1 Slain2-202ENSMUST00000144843 4833 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh15Q99PJ1 Irx3os-203ENSMUST00000133528 1354 ntTSL 5 BASIC14.99□□□□□ -0.01
Pcdh15Q99PJ1 Tjap1-211ENSMUST00000225080 2412 ntAPPRIS P2 BASIC14.99□□□□□ -0.01
Pcdh15Q99PJ1 Spatc1l-201ENSMUST00000009259 1332 ntAPPRIS P1 TSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh15Q99PJ1 1810058I24Rik-203ENSMUST00000152147 2521 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh15Q99PJ1 Sox5-202ENSMUST00000077160 2526 ntTSL 1 (best) BASIC14.99□□□□□ -0.01
Pcdh15Q99PJ1 Card9-201ENSMUST00000028294 1880 ntAPPRIS P1 TSL 5 BASIC14.99□□□□□ -0.01
Retrieved 100 of 76,532 protein–RNA pairs in 27 ms