Protein–RNA interactions for Protein: Q99PF4

Cdh23, Cadherin-23, mousemouse

Predictions only

Length 3,354 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cdh23Q99PF4 Anks1b-204ENSMUST00000179337 2692 ntTSL 5 BASIC13.54□□□□□ -0.24
Cdh23Q99PF4 Ptk2-202ENSMUST00000170939 3598 ntTSL 2 BASIC13.54□□□□□ -0.24
Cdh23Q99PF4 Smpd3-202ENSMUST00000212896 2626 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh23Q99PF4 Rara-203ENSMUST00000107474 2380 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
Cdh23Q99PF4 Prodh-201ENSMUST00000003620 2385 ntAPPRIS P2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh23Q99PF4 Egr2-203ENSMUST00000127820 2665 ntAPPRIS ALT2 TSL 5 BASIC13.54□□□□□ -0.24
Cdh23Q99PF4 Gm43056-201ENSMUST00000197865 2791 ntBASIC13.54□□□□□ -0.24
Cdh23Q99PF4 Ly9-201ENSMUST00000004827 2098 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh23Q99PF4 Mocs2-205ENSMUST00000165022 962 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh23Q99PF4 Gm17168-201ENSMUST00000169146 345 ntTSL 5 BASIC13.54□□□□□ -0.24
Cdh23Q99PF4 Gm17391-201ENSMUST00000171036 126 ntBASIC13.54□□□□□ -0.24
Cdh23Q99PF4 Mt2-202ENSMUST00000212806 388 ntTSL 2 BASIC13.54□□□□□ -0.24
Cdh23Q99PF4 4930448E22Rik-203ENSMUST00000215349 299 ntTSL 3 BASIC13.54□□□□□ -0.24
Cdh23Q99PF4 Hsd17b10-201ENSMUST00000026289 962 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh23Q99PF4 Olfr1368-201ENSMUST00000055298 1064 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
Cdh23Q99PF4 Actr3-202ENSMUST00000178474 2565 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh23Q99PF4 Nmral1-202ENSMUST00000079130 1459 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh23Q99PF4 Cox4i2-201ENSMUST00000010020 727 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh23Q99PF4 Gm11978-201ENSMUST00000122315 466 ntBASIC13.54□□□□□ -0.24
Cdh23Q99PF4 Gm25043-201ENSMUST00000158604 212 ntBASIC13.54□□□□□ -0.24
Cdh23Q99PF4 Gm43916-201ENSMUST00000205062 967 ntBASIC13.54□□□□□ -0.24
Cdh23Q99PF4 Cd320-202ENSMUST00000087559 1191 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh23Q99PF4 Efemp2-209ENSMUST00000167371 1382 ntTSL 5 BASIC13.54□□□□□ -0.24
Cdh23Q99PF4 C130080G10Rik-203ENSMUST00000154140 1564 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh23Q99PF4 B230319C09Rik-201ENSMUST00000063376 1689 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh23Q99PF4 Hnrnpf-203ENSMUST00000167182 2271 ntAPPRIS P1 TSL 3 BASIC13.54□□□□□ -0.24
Cdh23Q99PF4 Arnt-203ENSMUST00000102749 2699 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh23Q99PF4 Stxbp1-201ENSMUST00000050000 3892 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
Cdh23Q99PF4 Gm45495-201ENSMUST00000200940 1700 ntBASIC13.53□□□□□ -0.24
Cdh23Q99PF4 Mrps9-201ENSMUST00000057208 1418 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh23Q99PF4 Sema6c-203ENSMUST00000107217 3595 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh23Q99PF4 Tmem163-205ENSMUST00000185560 3488 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh23Q99PF4 Mtfr2-201ENSMUST00000169712 1991 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh23Q99PF4 Rev1-201ENSMUST00000027251 4262 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh23Q99PF4 Sept8-204ENSMUST00000121334 2801 ntAPPRIS ALT2 TSL 5 BASIC13.53□□□□□ -0.24
Cdh23Q99PF4 Mafk-201ENSMUST00000018287 2849 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh23Q99PF4 Magi2-201ENSMUST00000088516 4843 ntAPPRIS P2 TSL 5 BASIC13.53□□□□□ -0.24
Cdh23Q99PF4 Alkbh3-202ENSMUST00000111240 1395 ntTSL 5 BASIC13.53□□□□□ -0.24
Cdh23Q99PF4 Gm11930-201ENSMUST00000117788 190 ntBASIC13.53□□□□□ -0.24
Cdh23Q99PF4 3110080O07Rik-201ENSMUST00000193469 1021 ntBASIC13.53□□□□□ -0.24
Cdh23Q99PF4 AC101677.2-201ENSMUST00000218733 741 ntTSL 3 BASIC13.53□□□□□ -0.24
Cdh23Q99PF4 Mapkapk5-204ENSMUST00000111783 1513 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh23Q99PF4 Hmga2-201ENSMUST00000072777 3710 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh23Q99PF4 Kcnc4-201ENSMUST00000009617 3667 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh23Q99PF4 Brinp1-201ENSMUST00000030036 3212 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh23Q99PF4 Snrpa-206ENSMUST00000163311 1288 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
Cdh23Q99PF4 Mir6546-201ENSMUST00000184460 62 ntBASIC13.53□□□□□ -0.24
Cdh23Q99PF4 Mir124-2hg-207ENSMUST00000189868 535 ntTSL 2 BASIC13.53□□□□□ -0.24
Cdh23Q99PF4 Gm44968-201ENSMUST00000207652 1171 ntTSL 5 BASIC13.53□□□□□ -0.24
Cdh23Q99PF4 Gm7848-201ENSMUST00000210739 718 ntBASIC13.53□□□□□ -0.24
Cdh23Q99PF4 Gm10179-201ENSMUST00000086233 688 ntBASIC13.53□□□□□ -0.24
Cdh23Q99PF4 Lce1e-201ENSMUST00000090867 711 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh23Q99PF4 Zswim6-201ENSMUST00000105097 5456 ntTSL 5 BASIC13.53□□□□□ -0.24
Cdh23Q99PF4 Sipa1-203ENSMUST00000164304 3614 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh23Q99PF4 Rbmx-203ENSMUST00000114730 2019 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
Cdh23Q99PF4 Moxd1-201ENSMUST00000095784 3090 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh23Q99PF4 Csrnp1-203ENSMUST00000214058 2241 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
Cdh23Q99PF4 Gm16347-202ENSMUST00000149000 772 ntTSL 3 BASIC13.52□□□□□ -0.24
Cdh23Q99PF4 Gm20457-201ENSMUST00000173374 682 ntTSL 3 BASIC13.52□□□□□ -0.24
Cdh23Q99PF4 Fabp6-201ENSMUST00000020672 479 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cdh23Q99PF4 Ints13-201ENSMUST00000032427 3059 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cdh23Q99PF4 AC169511.2-201ENSMUST00000226674 2063 ntBASIC13.52□□□□□ -0.24
Cdh23Q99PF4 Tbc1d12-201ENSMUST00000037302 4209 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cdh23Q99PF4 Senp6-202ENSMUST00000164859 3853 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cdh23Q99PF4 Tcf4-226ENSMUST00000201094 2172 ntTSL 5 BASIC13.52□□□□□ -0.24
Cdh23Q99PF4 Npnt-204ENSMUST00000117164 1779 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cdh23Q99PF4 Tufm-201ENSMUST00000098048 1679 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
Cdh23Q99PF4 Tmsb10-201ENSMUST00000114048 623 ntAPPRIS P1 TSL 3 BASIC13.52□□□□□ -0.25
Cdh23Q99PF4 Mocs2-215ENSMUST00000184335 646 ntTSL 5 BASIC13.52□□□□□ -0.25
Cdh23Q99PF4 Rprl1-202ENSMUST00000198476 238 ntBASIC13.52□□□□□ -0.25
Cdh23Q99PF4 E230034D01Rik-201ENSMUST00000214440 1212 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh23Q99PF4 Begain-204ENSMUST00000209829 3272 ntAPPRIS ALT2 TSL 5 BASIC13.52□□□□□ -0.25
Cdh23Q99PF4 Rnpepl1-201ENSMUST00000027487 3337 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh23Q99PF4 Cd8b1-201ENSMUST00000065248 1483 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh23Q99PF4 4732463B04Rik-201ENSMUST00000180751 2932 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh23Q99PF4 Tspan12-202ENSMUST00000120965 2157 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh23Q99PF4 Rtn3-201ENSMUST00000025667 2841 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh23Q99PF4 Mb-201ENSMUST00000019037 966 ntAPPRIS P1 TSL 2 BASIC13.52□□□□□ -0.25
Cdh23Q99PF4 Tmem176b-206ENSMUST00000203355 1202 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
Cdh23Q99PF4 AC159462.1-201ENSMUST00000214822 687 ntTSL 5 BASIC13.52□□□□□ -0.25
Cdh23Q99PF4 AC123665.1-201ENSMUST00000228204 438 ntBASIC13.52□□□□□ -0.25
Cdh23Q99PF4 Slc4a2-201ENSMUST00000080067 4179 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh23Q99PF4 Meis2-204ENSMUST00000110906 3229 ntTSL 2 BASIC13.52□□□□□ -0.25
Cdh23Q99PF4 Kctd14-201ENSMUST00000050732 2343 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
Cdh23Q99PF4 Eef1akmt3-201ENSMUST00000116231 2719 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Cdh23Q99PF4 Ank-201ENSMUST00000022875 3498 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh23Q99PF4 Dnaaf5-201ENSMUST00000026975 3450 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh23Q99PF4 Kcnh4-202ENSMUST00000107363 3948 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Cdh23Q99PF4 Rn7s6-201ENSMUST00000175005 291 ntBASIC13.51□□□□□ -0.25
Cdh23Q99PF4 Ovol3-201ENSMUST00000189482 731 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Cdh23Q99PF4 AC169036.1-201ENSMUST00000227994 296 ntBASIC13.51□□□□□ -0.25
Cdh23Q99PF4 Bbs5-202ENSMUST00000112286 1397 ntTSL 5 BASIC13.51□□□□□ -0.25
Cdh23Q99PF4 Cpne1-202ENSMUST00000109607 3441 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh23Q99PF4 Rabep2-202ENSMUST00000106407 2234 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh23Q99PF4 Ikzf5-202ENSMUST00000121033 2231 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh23Q99PF4 Srsf10-205ENSMUST00000126641 3754 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh23Q99PF4 Dbndd1-203ENSMUST00000177240 1463 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh23Q99PF4 Map7d1-201ENSMUST00000061143 3351 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
Cdh23Q99PF4 Gm15440-201ENSMUST00000110042 1231 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
Cdh23Q99PF4 Dnajc25-204ENSMUST00000152199 1141 ntTSL 5 BASIC13.51□□□□□ -0.25
Retrieved 100 of 76,532 protein–RNA pairs in 36.2 ms