Protein–RNA interactions for Protein: Q99LC2

Cstf1, Cleavage stimulation factor subunit 1, mousemouse

Known RBP Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Cstf1Q99LC2 3830417A13Rik-201ENSMUST00000033522 1649 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cstf1Q99LC2 Taf2-201ENSMUST00000041733 5031 ntAPPRIS P1 TSL 1 (best) BASIC13.61□□□□□ -0.23
Cstf1Q99LC2 Itpripl1-203ENSMUST00000154021 1753 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cstf1Q99LC2 Fam169b-202ENSMUST00000125685 2821 ntAPPRIS P2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cstf1Q99LC2 Gata4-201ENSMUST00000067417 3400 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cstf1Q99LC2 Dffa-202ENSMUST00000103216 1835 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cstf1Q99LC2 Pdpn-201ENSMUST00000030317 1817 ntAPPRIS P3 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cstf1Q99LC2 Fkbp10-201ENSMUST00000001595 2584 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cstf1Q99LC2 Gm12241-201ENSMUST00000118330 726 ntBASIC13.6□□□□□ -0.23
Cstf1Q99LC2 Rpl17-ps5-201ENSMUST00000121001 555 ntBASIC13.6□□□□□ -0.23
Cstf1Q99LC2 Gm45692-201ENSMUST00000131138 557 ntAPPRIS P1 TSL 5 BASIC13.6□□□□□ -0.23
Cstf1Q99LC2 Tbx3-201ENSMUST00000018748 4856 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cstf1Q99LC2 Gm45865-201ENSMUST00000211815 945 ntBASIC13.6□□□□□ -0.23
Cstf1Q99LC2 Inhba-201ENSMUST00000042603 6390 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cstf1Q99LC2 Rps5-201ENSMUST00000004554 761 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cstf1Q99LC2 Nkiras2-202ENSMUST00000051947 831 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cstf1Q99LC2 Olfr171-201ENSMUST00000079891 945 ntAPPRIS P2 BASIC13.6□□□□□ -0.23
Cstf1Q99LC2 Mir497b-201ENSMUST00000093601 125 ntBASIC13.6□□□□□ -0.23
Cstf1Q99LC2 Mtss1-201ENSMUST00000080371 4938 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cstf1Q99LC2 Foxred2-201ENSMUST00000016696 4793 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cstf1Q99LC2 Plekha4-201ENSMUST00000051810 2660 ntAPPRIS P2 TSL 5 BASIC13.6□□□□□ -0.23
Cstf1Q99LC2 Wdr46-201ENSMUST00000025170 2227 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cstf1Q99LC2 Dnmt3b-202ENSMUST00000072997 4208 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cstf1Q99LC2 B4galt3-202ENSMUST00000111313 2098 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cstf1Q99LC2 Arhgef40-201ENSMUST00000093813 5621 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cstf1Q99LC2 Capn7-201ENSMUST00000022451 3648 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cstf1Q99LC2 Itfg1-201ENSMUST00000034140 3306 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cstf1Q99LC2 Gm11638-201ENSMUST00000153672 1615 ntTSL 2 BASIC13.6□□□□□ -0.23
Cstf1Q99LC2 Gm43509-201ENSMUST00000196551 2594 ntBASIC13.6□□□□□ -0.23
Cstf1Q99LC2 Med15-201ENSMUST00000012259 3383 ntAPPRIS P4 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cstf1Q99LC2 4930402H24Rik-202ENSMUST00000110243 1984 ntAPPRIS ALT2 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cstf1Q99LC2 Fstl4-201ENSMUST00000036796 4380 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cstf1Q99LC2 Mdfic-201ENSMUST00000101663 3431 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cstf1Q99LC2 Mdfic-206ENSMUST00000189359 3435 ntAPPRIS P1 TSL 1 (best) BASIC13.6□□□□□ -0.23
Cstf1Q99LC2 Mdfic-207ENSMUST00000190255 3431 ntTSL 1 (best) BASIC13.6□□□□□ -0.23
Cstf1Q99LC2 Loxl1-201ENSMUST00000061799 3297 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cstf1Q99LC2 Daxx-208ENSMUST00000174541 2325 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Cstf1Q99LC2 C130050O18Rik-201ENSMUST00000052176 1532 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cstf1Q99LC2 Il6ra-202ENSMUST00000197679 8639 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cstf1Q99LC2 AC167013.2-201ENSMUST00000228520 2684 ntBASIC13.59□□□□□ -0.23
Cstf1Q99LC2 Irak1-204ENSMUST00000114352 3825 ntAPPRIS P3 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cstf1Q99LC2 1500015A07Rik-201ENSMUST00000184181 1865 ntBASIC13.59□□□□□ -0.23
Cstf1Q99LC2 Asic3-201ENSMUST00000049346 1853 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cstf1Q99LC2 Serinc5-201ENSMUST00000049488 5366 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cstf1Q99LC2 Gm9742-201ENSMUST00000165220 1553 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cstf1Q99LC2 Wbscr25-202ENSMUST00000148729 2075 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cstf1Q99LC2 Sp2-203ENSMUST00000107624 3055 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cstf1Q99LC2 Selenon-201ENSMUST00000060435 3445 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Cstf1Q99LC2 Adgrb2-202ENSMUST00000097868 4635 ntAPPRIS ALT2 TSL 5 BASIC13.59□□□□□ -0.23
Cstf1Q99LC2 Lap3-201ENSMUST00000046122 2267 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cstf1Q99LC2 Trim15-203ENSMUST00000174195 1778 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cstf1Q99LC2 Cpne1-203ENSMUST00000109608 3492 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cstf1Q99LC2 Capns2-201ENSMUST00000104947 1005 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Cstf1Q99LC2 Rpl28-ps3-201ENSMUST00000116058 393 ntBASIC13.59□□□□□ -0.23
Cstf1Q99LC2 Cryzl1-204ENSMUST00000122254 845 ntTSL 3 BASIC13.59□□□□□ -0.23
Cstf1Q99LC2 4930481A15Rik-201ENSMUST00000128542 2106 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cstf1Q99LC2 Fam163b-201ENSMUST00000151224 2959 ntAPPRIS P1 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cstf1Q99LC2 6030498E09Rik-202ENSMUST00000168144 510 ntAPPRIS P1 TSL 5 BASIC13.59□□□□□ -0.23
Cstf1Q99LC2 Ggt5-203ENSMUST00000189972 648 ntTSL 3 BASIC13.59□□□□□ -0.23
Cstf1Q99LC2 Gm36937-201ENSMUST00000192957 429 ntTSL 3 BASIC13.59□□□□□ -0.23
Cstf1Q99LC2 Gm43133-201ENSMUST00000197472 463 ntBASIC13.59□□□□□ -0.23
Cstf1Q99LC2 Gm40493-201ENSMUST00000210223 400 ntTSL 3 BASIC13.59□□□□□ -0.23
Cstf1Q99LC2 Nanos3-201ENSMUST00000070102 730 ntAPPRIS P2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cstf1Q99LC2 Krtap19-2-201ENSMUST00000076186 605 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Cstf1Q99LC2 Gm10268-201ENSMUST00000085340 555 ntBASIC13.59□□□□□ -0.23
Cstf1Q99LC2 Brpf1-210ENSMUST00000204626 4381 ntAPPRIS ALT2 TSL 1 (best) BASIC13.59□□□□□ -0.23
Cstf1Q99LC2 Gm43951-201ENSMUST00000204457 2889 ntAPPRIS P1 BASIC13.59□□□□□ -0.23
Cstf1Q99LC2 Fbxo27-202ENSMUST00000108280 2031 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cstf1Q99LC2 Cflar-204ENSMUST00000114309 2010 ntTSL 1 (best) BASIC13.59□□□□□ -0.23
Cstf1Q99LC2 Carlr-201ENSMUST00000181515 2574 ntBASIC13.59□□□□□ -0.23
Cstf1Q99LC2 Anks1b-231ENSMUST00000183136 2786 ntTSL 5 BASIC13.59□□□□□ -0.23
Cstf1Q99LC2 Grin2a-202ENSMUST00000115835 5023 ntAPPRIS P1 TSL 5 BASIC13.58□□□□□ -0.23
Cstf1Q99LC2 Cep164-204ENSMUST00000213154 6105 ntAPPRIS ALT2 TSL 5 BASIC13.58□□□□□ -0.23
Cstf1Q99LC2 Smo-201ENSMUST00000001812 3779 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cstf1Q99LC2 Tex13b-201ENSMUST00000044179 2116 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cstf1Q99LC2 Ntng2-201ENSMUST00000048455 1770 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.23
Cstf1Q99LC2 Mbp-202ENSMUST00000062446 2186 ntAPPRIS P4 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cstf1Q99LC2 Lrrc10-201ENSMUST00000073834 1428 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Cstf1Q99LC2 Sh2d5-202ENSMUST00000105824 3512 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cstf1Q99LC2 Flt4-201ENSMUST00000020617 6255 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cstf1Q99LC2 Ubc-202ENSMUST00000136312 2618 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cstf1Q99LC2 Kcnf1-201ENSMUST00000170580 4789 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Cstf1Q99LC2 Gm11793-201ENSMUST00000120433 981 ntBASIC13.58□□□□□ -0.24
Cstf1Q99LC2 Dgcr6-203ENSMUST00000143343 1280 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cstf1Q99LC2 Ly6g5b-202ENSMUST00000172854 1176 ntAPPRIS ALT2 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cstf1Q99LC2 Rnf2-203ENSMUST00000186415 1106 ntTSL 5 BASIC13.58□□□□□ -0.24
Cstf1Q99LC2 Rpl7a-ps10-201ENSMUST00000190579 798 ntBASIC13.58□□□□□ -0.24
Cstf1Q99LC2 1700045I11Rik-201ENSMUST00000194752 493 ntBASIC13.58□□□□□ -0.24
Cstf1Q99LC2 9430085M18Rik-201ENSMUST00000198824 1178 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cstf1Q99LC2 Gm7118-201ENSMUST00000200167 1003 ntBASIC13.58□□□□□ -0.24
Cstf1Q99LC2 Olfr284-202ENSMUST00000206647 966 ntBASIC13.58□□□□□ -0.24
Cstf1Q99LC2 Gm33056-201ENSMUST00000213234 1120 ntTSL 1 (best) BASIC13.58□□□□□ -0.24
Cstf1Q99LC2 CT033793.1-201ENSMUST00000216883 565 ntTSL 5 BASIC13.58□□□□□ -0.24
Cstf1Q99LC2 Gm30906-201ENSMUST00000219578 535 ntTSL 3 BASIC13.58□□□□□ -0.24
Cstf1Q99LC2 Mrto4-201ENSMUST00000030513 930 ntAPPRIS P3 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cstf1Q99LC2 Aspdh-201ENSMUST00000035929 1017 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cstf1Q99LC2 Nr0b2-201ENSMUST00000042706 1132 ntAPPRIS P1 TSL 1 (best) BASIC13.58□□□□□ -0.24
Cstf1Q99LC2 Rpl7a-ps3-201ENSMUST00000090170 796 ntBASIC13.58□□□□□ -0.24
Cstf1Q99LC2 Rpl7a-ps5-201ENSMUST00000095218 807 ntAPPRIS P1 BASIC13.58□□□□□ -0.24
Cstf1Q99LC2 Carmil3-201ENSMUST00000076236 4602 ntAPPRIS P1 TSL 2 BASIC13.58□□□□□ -0.24
Retrieved 100 of 76,532 protein–RNA pairs in 48.3 ms