Protein–RNA interactions for Protein: Q99J36

Thumpd1, THUMP domain-containing protein 1, mousemouse

Known RBP Predictions only

Length 350 aa.

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Protein RNA Prediction (catRAPID) Interaction (Experimental data)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
Thumpd1Q99J36 Gm17271-201ENSMUST00000165535 355 ntBASIC12.14□□□□□ -0.47
Thumpd1Q99J36 Tmem217-202ENSMUST00000168339 812 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd1Q99J36 Hsd3b2-203ENSMUST00000177651 1122 ntAPPRIS P1 TSL 5 BASIC12.14□□□□□ -0.47
Thumpd1Q99J36 Gm27631-201ENSMUST00000184163 466 ntBASIC12.14□□□□□ -0.47
Thumpd1Q99J36 Ighv1-25-201ENSMUST00000195638 345 ntBASIC12.14□□□□□ -0.47
Thumpd1Q99J36 4933437G19Rik-201ENSMUST00000197910 1178 ntBASIC12.14□□□□□ -0.47
Thumpd1Q99J36 Abhd18-207ENSMUST00000203892 1021 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd1Q99J36 Gm5364-201ENSMUST00000216789 889 ntBASIC12.14□□□□□ -0.47
Thumpd1Q99J36 AI463170-204ENSMUST00000220157 447 ntTSL 3 BASIC12.14□□□□□ -0.47
Thumpd1Q99J36 AC164441.1-201ENSMUST00000221369 1004 ntTSL 5 BASIC12.14□□□□□ -0.47
Thumpd1Q99J36 Miox-201ENSMUST00000023282 1130 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd1Q99J36 Mgst3-201ENSMUST00000028005 1097 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd1Q99J36 Il31-201ENSMUST00000031389 806 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd1Q99J36 Cfdp1-201ENSMUST00000034432 1178 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd1Q99J36 Tspo-201ENSMUST00000047419 837 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd1Q99J36 Gm9925-201ENSMUST00000066583 483 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Thumpd1Q99J36 Haus7-202ENSMUST00000077243 1032 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd1Q99J36 4931429P17Rik-201ENSMUST00000061899 2012 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd1Q99J36 Iqsec3-203ENSMUST00000151397 8067 ntTSL 2 BASIC12.14□□□□□ -0.47
Thumpd1Q99J36 Rgs12-205ENSMUST00000114283 2628 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Thumpd1Q99J36 Gm14379-201ENSMUST00000128858 1878 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd1Q99J36 Polg-201ENSMUST00000073889 7837 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd1Q99J36 Senp5-201ENSMUST00000023457 3498 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd1Q99J36 Taf1c-201ENSMUST00000093099 3236 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd1Q99J36 Mynn-202ENSMUST00000192715 5555 ntAPPRIS P1 TSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd1Q99J36 Ap4b1-203ENSMUST00000106823 2741 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd1Q99J36 Psmd8-207ENSMUST00000209034 1983 ntTSL 2 BASIC12.14□□□□□ -0.47
Thumpd1Q99J36 Itga3-203ENSMUST00000120375 4697 ntAPPRIS ALT2 TSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd1Q99J36 Shc1-203ENSMUST00000107417 3079 ntTSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd1Q99J36 Tspyl3-201ENSMUST00000099194 3072 ntAPPRIS P1 BASIC12.14□□□□□ -0.47
Thumpd1Q99J36 Kif16b-201ENSMUST00000043589 6383 ntAPPRIS P1 TSL 2 BASIC12.14□□□□□ -0.47
Thumpd1Q99J36 Gm42748-201ENSMUST00000199354 2341 ntBASIC12.14□□□□□ -0.47
Thumpd1Q99J36 Rbm47-206ENSMUST00000200775 3180 ntAPPRIS P3 TSL 1 (best) BASIC12.14□□□□□ -0.47
Thumpd1Q99J36 Afdn-216ENSMUST00000170827 7338 ntAPPRIS ALT2 TSL 5 BASIC12.14□□□□□ -0.47
Thumpd1Q99J36 Nt5c3b-202ENSMUST00000092689 1344 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd1Q99J36 Gm34006-202ENSMUST00000216467 1918 ntTSL 2 BASIC12.13□□□□□ -0.47
Thumpd1Q99J36 Spred3-201ENSMUST00000048923 4056 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd1Q99J36 Lnx1-205ENSMUST00000117525 2259 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd1Q99J36 Adgrv1-205ENSMUST00000126444 3823 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd1Q99J36 Iffo2-202ENSMUST00000123827 2036 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd1Q99J36 Tmem176b-203ENSMUST00000166247 1414 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd1Q99J36 Vps4b-201ENSMUST00000094646 4633 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd1Q99J36 Pax6-202ENSMUST00000090397 3069 ntAPPRIS ALT1 TSL 5 BASIC12.13□□□□□ -0.47
Thumpd1Q99J36 Gm44414-201ENSMUST00000203660 2109 ntBASIC12.13□□□□□ -0.47
Thumpd1Q99J36 Nbeal2-211ENSMUST00000196488 8599 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Thumpd1Q99J36 Sntb1-201ENSMUST00000039769 4919 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd1Q99J36 Fbxo44-202ENSMUST00000105705 1034 ntTSL 2 BASIC12.13□□□□□ -0.47
Thumpd1Q99J36 Kif16bos-201ENSMUST00000124774 495 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd1Q99J36 Serpinf1-202ENSMUST00000125982 605 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd1Q99J36 Gm15701-201ENSMUST00000129559 573 ntTSL 3 BASIC12.13□□□□□ -0.47
Thumpd1Q99J36 Gm8116-201ENSMUST00000182917 1201 ntBASIC12.13□□□□□ -0.47
Thumpd1Q99J36 Pomc-201ENSMUST00000020990 1031 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd1Q99J36 Vsig2-206ENSMUST00000215957 851 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd1Q99J36 Mrpl27-201ENSMUST00000025278 756 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd1Q99J36 Casp16-ps-201ENSMUST00000088673 531 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Thumpd1Q99J36 Lce3e-201ENSMUST00000098886 607 ntAPPRIS P1 TSL 3 BASIC12.13□□□□□ -0.47
Thumpd1Q99J36 Gm43423-201ENSMUST00000198390 2094 ntBASIC12.13□□□□□ -0.47
Thumpd1Q99J36 Bmp4-201ENSMUST00000074077 2064 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd1Q99J36 Olfr533-204ENSMUST00000216258 2874 ntAPPRIS P1 TSL 5 BASIC12.13□□□□□ -0.47
Thumpd1Q99J36 Dcp1b-201ENSMUST00000073909 1748 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd1Q99J36 Zbtb7b-203ENSMUST00000107433 3650 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd1Q99J36 AC164107.1-201ENSMUST00000227730 2161 ntBASIC12.13□□□□□ -0.47
Thumpd1Q99J36 Ccdc162-208ENSMUST00000179614 2739 ntTSL 5 BASIC12.13□□□□□ -0.47
Thumpd1Q99J36 Ahsg-201ENSMUST00000023583 1474 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd1Q99J36 Pdgfra-205ENSMUST00000201711 4088 ntTSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd1Q99J36 Gm5385-201ENSMUST00000118988 1559 ntBASIC12.13□□□□□ -0.47
Thumpd1Q99J36 C530008M17Rik-202ENSMUST00000120639 6826 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd1Q99J36 C530008M17Rik-211ENSMUST00000163347 6835 ntAPPRIS P2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd1Q99J36 Gm44241-201ENSMUST00000203230 1662 ntBASIC12.13□□□□□ -0.47
Thumpd1Q99J36 Itgb4-202ENSMUST00000068981 5584 ntAPPRIS ALT2 TSL 5 BASIC12.13□□□□□ -0.47
Thumpd1Q99J36 Gsn-201ENSMUST00000028239 2653 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd1Q99J36 C130012C08Rik-201ENSMUST00000194287 3665 ntBASIC12.13□□□□□ -0.47
Thumpd1Q99J36 Rhot1-204ENSMUST00000092857 3687 ntAPPRIS P3 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd1Q99J36 Zfp595-205ENSMUST00000171466 2240 ntAPPRIS ALT2 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd1Q99J36 Esr1-204ENSMUST00000105590 6339 ntAPPRIS P1 TSL 1 (best) BASIC12.13□□□□□ -0.47
Thumpd1Q99J36 Gm26651-201ENSMUST00000181851 2325 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd1Q99J36 Tmem51os1-204ENSMUST00000153023 3440 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd1Q99J36 Krt18-201ENSMUST00000023803 1400 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd1Q99J36 Mcm8-201ENSMUST00000028831 3179 ntAPPRIS ALT2 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd1Q99J36 Myh14-203ENSMUST00000107900 6400 ntAPPRIS ALT2 TSL 5 BASIC12.12□□□□□ -0.47
Thumpd1Q99J36 Lgals8-203ENSMUST00000124888 2843 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd1Q99J36 Colgalt1-201ENSMUST00000047903 3207 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd1Q99J36 Nfib-203ENSMUST00000107245 9116 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd1Q99J36 Tbc1d16-201ENSMUST00000036113 6986 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd1Q99J36 Clmp-201ENSMUST00000034522 4154 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd1Q99J36 Agpat1-202ENSMUST00000114140 1941 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd1Q99J36 Tacc3-202ENSMUST00000079534 2899 ntAPPRIS P3 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd1Q99J36 Gm13288-201ENSMUST00000094977 2850 ntAPPRIS P1 BASIC12.12□□□□□ -0.47
Thumpd1Q99J36 Dio1-202ENSMUST00000106748 396 ntTSL 5 BASIC12.12□□□□□ -0.47
Thumpd1Q99J36 Siva1-202ENSMUST00000109755 333 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd1Q99J36 E530001F21Rik-201ENSMUST00000120991 730 ntBASIC12.12□□□□□ -0.47
Thumpd1Q99J36 Nudcd2-203ENSMUST00000127382 727 ntTSL 2 BASIC12.12□□□□□ -0.47
Thumpd1Q99J36 3000002C10Rik-202ENSMUST00000133495 1008 ntBASIC12.12□□□□□ -0.47
Thumpd1Q99J36 Pcp2-204ENSMUST00000136105 504 ntAPPRIS P4 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd1Q99J36 Bnipl-204ENSMUST00000137250 1251 ntTSL 5 BASIC12.12□□□□□ -0.47
Thumpd1Q99J36 Timm23-201ENSMUST00000013845 1173 ntAPPRIS P1 TSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd1Q99J36 Crem-221ENSMUST00000142690 1256 ntTSL 1 (best) BASIC12.12□□□□□ -0.47
Thumpd1Q99J36 Gm4971-201ENSMUST00000205991 1108 ntBASIC12.12□□□□□ -0.47
Thumpd1Q99J36 Gm18049-201ENSMUST00000208909 581 ntBASIC12.12□□□□□ -0.47
Thumpd1Q99J36 Gm45612-201ENSMUST00000211320 160 ntBASIC12.12□□□□□ -0.47
Retrieved 100 of 76,532 protein–RNA pairs in 31.4 ms